EMLSAT00000004793, EMLSAT00000004793-700640 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004793
Unique NameEMLSAT00000004793-700640
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s252supercontigLSalAtl2s252:407712..412742 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004793 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004793EMLSAG00000004793-687559Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000020990EMLSAE00000020990-729918Lepeophtheirus salmonisexon
EMLSAE00000020991EMLSAE00000020991-729919Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777367auto777367Lepeophtheirus salmonispolypeptide
EMLSAP00000004793EMLSAP00000004793Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004793

>EMLSAP00000004793 ID=EMLSAP00000004793|Name=EMLSAP00000004793|organism=Lepeophtheirus salmonis|type=polypeptide|length=179bp
MLSKSNTWDLQQLVHILHIDPENVKIYLNEDALQKPQNPLGPSKKDTSVS
SPRISCKRRISLDNTSTHSLPPTKVIIRGQARTRGRPTRTGGLTRTSXMA
NSSESEATKPTGFHDMMNVETWICAICEEYDPNIANADQSTTEWIGXXCN
RWYHQFCTKLKVLDKNFNCAHVNLECLPT
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mRNA from alignment at LSalAtl2s252:407712..412742-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004793-700640 ID=EMLSAT00000004793-700640|Name=EMLSAT00000004793|organism=Lepeophtheirus salmonis|type=mRNA|length=5031bp|location=Sequence derived from alignment at LSalAtl2s252:407712..412742- (Lepeophtheirus salmonis)
ATGTTATCTAAAAGTAATACATGGGACCTTCAGCAATTGGTTCATATTTT
ACATATTGATCCTGAAAATGTAAAGATTTATTTAAATGAAGATGCATTGC
AGAAACCACAAAACCCTTTAGGACCCTCCAAAAAAGGTAACCTAGTAGTA
TTTAATGACATATCATTTCACTATTCATTAAGGCCTAATGACTTATTACT
TTGTTCATACATAACAAGATTCGTGTAAGCTATATAGTTATTAGCTGTTA
ATATCAATATAAATTCAATATTGTATAATTTAATTTCTCATTGATAATTT
ATTAAATATAAATATTCTGAAGCCCTATATCGTAGACCAAAGTGCTCAAT
TTGTAGTTTGAAAGGCTCTCATTTTTAATTGTCCATAAAGTCTTCATATT
AAAATGTTATCAATTACAGCTCTTAATGGTCTTGTACCATGTATGTGCAT
TCAGCGTTGGTTTGCATACCAGATAGGATATATTAATGAGTTTTTCTCCT
ATTATTGTGCGACGAAACGTATGGTGCTGTGATATATAATCATATTTTTA
TATATTCCTACACATAATATTAATGCAATTCTCGAGATTATTCTTGGTGT
TGTCTCAGTCTCGACATCTCAATATATTTTTTCAAGATCAAAGCAACTAA
ATGTACACTATTTTAAACACTGATTTAAAACAATGTGTAGAGCAAATAGT
ACTATAAAATGAAATAATGAATTACGGCTAAAATTATACATTTATTTAAT
TTCATCACTTTCAGAAGCAATCATTCACGCAATACGAGGCAAAAAAAGAT
TTACAGGTCAATTATATTTGTGGGAAAGATGAAAGGCTATACCACTGCCA
CTTCTCCCAAGATCATGATGAAGGCTGGATACTTTGTTTTGAACATGTGA
GAGCCATTATCTTCGACTTGAGCTTAGAGGTGTGGACTCCCTGAAATTTC
AGGGTAACTCCAAGTCTCACTTGATCTTCATGACCTAGTGCTGGGTTCGA
CATGAAATTCAAGATCAATTCCCTAGTCTAACGGGAATTTCAAGTCCGAG
TCCCGAATCTGGCAATTCATATATATGTATATGTATATTGCAATCTGTCT
ATCAATCTTGATTAACACTACGAAAAATGATGAAATACACTCTCATACTC
TGCAAAGTGGTCCACATTCAAAAGTTTGAGTCAAAAGGAAAAAAATAGAC
TCGGGACTCTCTCTAAATTAAGACTAGTCATGAGTCCTAAGAAAACAGGG
TAAACTTGTAAGTCTACAACCCTGCTTCAGCTACCTAGCAATAATTTGCA
ATATCTGTCAACGGTCTTGTTTATCTAATTGCCGAAGAAAATTATTATTT
CTCAATTGAACTTCATTTGTTGAATTATGCTTTACCATTTGTGACTGGCG
ACTTTTATATTTTTGGTAAAGATATGCTCGATTGTAAGAANNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTTTTCTTGAAATTAATAGGTTTGGAGAC
AGTTAAATTGCTCTGATTGCGTTTTTTTTGCCAAGATACTGATATGATTC
TAGGATTTGACCTGGTGAATTTTTTAGGTCAATAAAAAATATGGGYYGGG
GGGGGGGTCCACTTCTTGTCACACCTTGGATCATGGACTTTCCTTATATC
CTTGTCCTCCTTTCCACCGATTGTTGGTATTATAAACTATCCTCTTGAAT
TAACCAAGCAAGTTCTTGATTATACACATACATTATTATAAGTGAAGCTA
AAATAATACTTTACCTATTTTAAGTAGTTAAGTAATAATTTATAAATAAA
ATTAGGTAGAATAAGCTTTAAAATAGTCTGTATTTATTTAATCGATCCAG
GAAATTAAAAGTTACCTTTAAAAAANNNNNNNNNATGGGTAAAGAACTAG
GAAAATCGCTGAACATTAATGCATATTCAACGTCGTGGGGGTCTGATAAA
GACTTTTACTTCACATACTCCAGCGTTTTTCTTAGGGGCTGTAAAGATAC
GTATGTGTTAGGACCTTAAAAATATATTAGTATTTTAGTAATATCTTTTC
TATGAGTTTAACAAATTTGTTAGAGAATTCTTTGATTAATTTTTTTTTGT
TAAGGGATCTCATTTTCATTTTGTAATAGAGGGTGGTTCAGGTAAATATG
GAACTTCTTTAACTTCATCCTGAACAATAAGAAAAATATTTAAATAGGTT
ATTTCAATTCTAAAGTGAGAGTTTGAGCGCTAGCTTTATGTTGCGCAACT
TTTAATTATAAAAGGTACTTCCGATAGAGGAGACCTGGAGATACACCATC
ATCGAATCGGCTTMCGCGGYCACAGCCCAGTGCACATCAAGAAGATGCTT
GGGTACCAAAGATATGCCTACAACCGCTGGAAGGAGGAAGGGTATATAAG
AGAAAAATCCACAAGTCCCGGATTAATAAAAAAAAACACTTAGATTCCTA
GTAGACCTTAAACTGTACGTGATCAACGTTCTCGCCTAAAACCGCCAAGT
AATCCGTGTAACAGTCTCCAGGGCCATTAACACTGCCCTGAGAATACCTG
AGTCATACTGCCTCTACAAAATACATATCCTTGCAGACAAAATGAAGGCC
ACCTGGGCTGCCCACGGAAGAAAATATCTGAACGATTTGAATTGCCATGG
TGACCAAATTATCTTTTATTGGGATAAGAAACAATGGACTGTCGATAGAT
CACACAACATCCAGAACAACGTGCTTAAAATCAAGTTTTCGGCCAGCATC
ATGCCCCTTGGGGTCATTGGGAGCAAAGGTCCGTCTTCTTTGAGCCAAAA
AAGAGGATGGGTACCGACAGGTAGTGTGAACTCATGTCTGACAAAAGTGA
TTCCTTGGATGAAAACTCAGGCCAATGGTGTTGAGTTCCTGTTTCAACAA
GACTCTGCACCTTCTCACAAGGCTTGCAAGACCCAAAACTTGTTGAAAGA
AGAGAAGGTGCCATTTTGACCCCTGACCTGGCCCTCTAACTCCCCCGATA
TGAATCCCATGAAATACTTCTTTTAGGTTAAGTTAGAGAAGAAGGTCTCA
GCCAATTCACAAAAACAGCATCGACTCCTTGAAGGCCTCCATTATCAAGT
AGTGGGACAAATTATCCGCACTGATGTGGTCAAGTCCTGTAAATCCTGTA
GACCTGATATCGAGCGACCTGTAGACCTGATATCGAGCGAATGATCAGCG
AAGATACCACTCATAGATTGAAGTTTTTCTTTGGTATTATTGAAACTTGT
AAATAAAATTTCAAACCTCTACTCTTTTCTCTTATTGATCAGGATTCAGT
TAAAGGTGGTCCGAATTTTCCCGTAACTACCTTGTATGTATAGAAATAGA
ATATATATTTGTTAAATATAAGTATCAGTACTTATTTTTTAGGGGATGTT
TTACCTTTTTTAAAGTACATTATTAACAAAGTGAAAAATATTAACTAATT
TTATGTCCATTAAGTGTAGTCAACATATATTTGTACTTATGAACTAGAAA
TAACTAATGTTTCTTTTAAATTTTTAGATACATCTGTTTCATCCCCTCGA
ATCAGTTGTAAAAGGAGGATCTCTTTAGATAATACATCTACACATAGTTT
ACCACCTACTAAAGTTATTATTCGTGGTCAAGCTCGCACTAGAGGACGCC
CAACAAGAACTGGCGGACTTACTCGTACCTCGGMGATGGCGAATTCTAGT
GAAAGTGAAGCGACAAAGCCAACAGGATTCCATGATATGATGAATGTAGA
AACTTGGATATGTGCAATATGTGAAGAATATGATCCAAATATAGCAAATG
CCGATCAATCAACGACTGAATGGATAGGCTGSGYTTGTAATCGATGGTAC
CATCAATTTTGTACAAAGTTGAAAGTACTTGATAAGAATTTTAATTGTGC
TCATGTGAATTTAGAGTGCCTTCCTACGTAA
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