EMLSAT00000004803, EMLSAT00000004803-700650 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000004803
Unique Name	EMLSAT00000004803-700650
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s253	supercontig	LSalAtl2s253:633677..642477 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000004803 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000004803	EMLSAG00000004803-687569	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000021024	EMLSAE00000021024-729952	Lepeophtheirus salmonis	exon
EMLSAE00000021025	EMLSAE00000021025-729953	Lepeophtheirus salmonis	exon
EMLSAE00000021026	EMLSAE00000021026-729954	Lepeophtheirus salmonis	exon
EMLSAE00000021027	EMLSAE00000021027-729955	Lepeophtheirus salmonis	exon
EMLSAE00000021028	EMLSAE00000021028-729956	Lepeophtheirus salmonis	exon
EMLSAE00000021029	EMLSAE00000021029-729957	Lepeophtheirus salmonis	exon
EMLSAE00000021030	EMLSAE00000021030-729958	Lepeophtheirus salmonis	exon
EMLSAE00000021031	EMLSAE00000021031-729959	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto779044	auto779044	Lepeophtheirus salmonis	polypeptide
EMLSAP00000004803	EMLSAP00000004803	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s253:633677..642477+

protein sequence of EMLSAP00000004803

>EMLSAP00000004803 ID=EMLSAP00000004803|Name=EMLSAP00000004803|organism=Lepeophtheirus salmonis|type=polypeptide|length=457bp
MASVVAXDDIQSYQNQTAADIESGRHRMDSYGSGGSEDALLSDVAYRSPR
RWPSEHAPLLQNGNRRPHPLYEDIDETTNVFPDDPHFTEVVRAAETAIDN
GIYPQRIYQGSSGSYFVKNSDGKTIGVFKPKDEEPYGRLNPKWTKWMHRL
CCPCCFGRSCLVPNQGYMSEAGASLVDTKLSLNVVPKTKIVRLASETFNY
LRIDREKVRAKHIVSEHFPKVGRRFHRLGLPPKVGSFQLFVEGYKDADFQ
XXRFXADKLSEETSKEFQLKFERLVVLDYIIRNTDRGNDNWLIKHTKEKK
DSEESESIPEAVDIAAIDNGLAFPFKHPDSWRAYPYHWSWLPCSKKEFSD
EIKELVLPKLSDMNFAQDLCDELYNLFKTDKGFDRHLFEKQMSVMRGQIL
NLTQSLKDNLSPFKLAQMPVVVVERSSGRVGTTERFREFSDTFTQRFQSK
GPFFSWC

mRNA from alignment at LSalAtl2s253:633677..642477+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000004803-700650 ID=EMLSAT00000004803-700650|Name=EMLSAT00000004803|organism=Lepeophtheirus salmonis|type=mRNA|length=8801bp|location=Sequence derived from alignment at LSalAtl2s253:633677..642477+ (Lepeophtheirus salmonis)
CCTACATGGTAGACTTGTTTGGAATGGTTGCAAAAATTCATTGGTATAAA
TTATAATTAATAATTATCTTACAACTTACAAATACCACAATATTGCAATT
TGTAAAGATGAAATAATTGAATTTAACTTTTTTAAATTTCCCATTTCCAA
AAATCCAAAAGAACTCGTAAGAAGAAAAACTGTATATCAAATCTTAAATA
TCTTCCTAATTGGAAACCTGCTGACCATTTTGTATGTGAAAATCATTTTG
AATCATAATTCCTTCTCCATAATTGTTCAAGCAAAAAATATATGAATAAT
GAAGTAAATAAAAGTAGAAACAGTAAAGTACTTCACTAATTCATTAGAGA
ACAGGAAATTATTCTCCTAAATGCTTGTAATAATAATACCTCTAGCGGAC
AAAAAAAGTAAATTTTCACCAAGATATTTTTTTCGCTAATAATGACTTTA
GCGATCAATACGCTACTTGGTTCAATGCTTCTATTATAACCTGTATTTCT
ATTAACCTTGGATTAGGTCTCCTTTTTAATGTACCGCAGATGACGTGACT
TTAATATCTGTTATTTTCCCTCGTAACGTATGCATTTTTTTTTCTTTGCA
TGAGCAAACTTGAAAATATATTTTATCTGTAAGGTATCGTAACAGTTTTC
AATTTATTTATGAACAAATAAGTAAACAAACACCTCTTTGGTATTCACCA
ATATAAAATGGAAAAATAAATTATTATTTTACTTGGCTGAAGATAAAATC
TGGAGCGAGGAATAAATCATGAATCTCGAGATTTGTATTCCCAGCTTATG
AGGGAGATTTATCTTTCTATTTTCTATTATAATAACATAGCGGGGCGGGT
TGATTGTTCAAGAGGTGGTTGTCAAGGTACAATTAAGTCAGAAAAGCTCA
TTCCCTATGGGGTATTATCCTTCTTGGAGTTTTATTATTTCCCCACATGG
CGCCACTATCAGAAGCCTTGGTTAGAAACTAATATAAGTCAACAACACTC
AAGAATGAATTTATGGAGGTAGTTAAGGGGTTTCTTGAGAGTATCTGGGG
AATAGGGAAAATCGACAAAGGACCCTATTCCTGAAAAAATAACTTTATTC
TTAAAAGAAACTTTATACTTGGGTTGGCTGATTTCATTCAATTTTCCAAA
TAGATAAAAATAAAATTTATATAATTAATTTTATCAACTGTTTTTTAAAT
TGATAATGATTTTGGCATTTTTTATGCTTATTTTTTATTAAACAAGGGAG
CCCAAATCAGTTACAGCAAAGTTTCCTCTACAGTAATTATAATCATTGGT
ATTTATAGAAGTGCCTTATTACTAGGGCATTAATACCATTTCAGCAAACA
TTTTATATAAATTTAAACTATCGAGTCTAAAGGTGGGTTCACTGAAGTGC
TTACGCACAATATAGCACGCATTTATTGTTGCTTTTTATTATTATAATTA
TCCTTATGTAGTAAATTTTTAATTTTCAAAAAAAAAAAAATTGATGTGAA
GTACAATAATAATAATAAAAAAAGGGACAAATTATGCGTGCAGAATGAGT
GTGTAAGGACTTCCATTAACCCACATTTACTTATTATGAACAAGATCATC
ACCTTCAAATGCCTCAGAACGTAAACATATATATTTTGAAAAGGAAAACC
TATCATAATCTTAAATTTGAATACTATTTATGTTAAAAATAAGCAAAGTT
CGTCTGTCTCTCTGAATGTGGAGGACACATTTTGATATGGTTCCCCTCTG
AACTAAGCATGATGTTAATTGATTTAAAAATGCATAATAAAATATTTAAA
GATAATTACAATATTTTTCCTGTACTAATGGTTGTTTAAATGTAGAAGCT
CTTCCCTAGTWTATAGCAGTAATTCATTTTCTCCCTCCAAANNNNAAAGT
TAAATATTAACAAGGGTCTTAATTCAGGGGTACCATATCTATATGTCTCG
CTCCCACCTTCTCCTCGCCCTCTTACAAAAAAAACAGCAACACATCTCTA
CAGTTTTAGTGTAAATCATGAAACTCTCAGACACGAAAATATTTTCGGAA
CCAACTAAATTTGGACAAAAAAATATAATTGGTCGCCATTAGTTGATTTT
AGCTTTTATCCTGAAGTAAAAAATGTTTTTAGGAGAACAATAATCATGAA
GTGAAAAAAATAAGATTTTTTACCGTTAGTCGTTCAATTTGTTTCTGTTA
AGGTACTGAGGCGTTCAAAAATGAACGGAGATTATGAACAATGCTCATTT
TCTGCTCAATCAAAAATATATGTATATATAACATGAATTGAAATTCATGC
TGAATGGTATACAAGTGTGTCCTTCCTTGATTGATTTTACGTCAATGGAC
GACTAATAAGTAATAATAAATTTAAATCATTTAAATTTGTATTGTAGCTG
AGTACATTACAGCAGTGTAAAGTCAAACTATAATTACCAAGGATTTCTAT
ACAAAAATCTCTCTTTTTTTCGTTTGTTGAGTCATGACAATTAATGTGTA
GGTATTATAAGTAAGTTACAAATATTATTATGTATTATTAAGCTAATTTT
GTTTCATTCCCAGTATAATGAGTCATGGGGAATAAAACCTCATAATATTG
CATATTTCCATAATAACAAAGACCACCCTAATTTGCTGTTAAATATTAAA
AAGATTTTTATAGCCTTTTTATTGGTCTGTAAATTAACAGAAATATAATT
TTGTCAGACAAATAATAAAACCATAATAAAATATATATTTAATCAGATAA
AAGCATTTCAAATATTATGTATGCCACTCCGACATGTCATCATAATTCAT
TAATCATAACTCAGTCATAAGTCATAATAGCAACTGATGAAAGGCAACGC
CAATATTATGTAGGAAGGAAATATAAATTTTAATATTCAAGGCCGTCGGG
GGGGGGGGGGGGGGGGTAGTTGACTCTTTGTCTATTATGTCAACATTTGT
TCAAAAGGTTTGAATCTCAGATCCCCAATCTGATATNTTATATATTTGAA
ATAAGCCCTTCGTAATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAA
ATATTATGTATGCCACTCCGACATGTCATCATAATTCATTAATCATAACT
CAGTCATAAGTCATAATAGCAACTGATGAAAGGCAACGCCAATATTATGT
AGGAAGGAAATATAAATTTTAATATTCAAGGCCGTCGGGAGGGGGGGGGG
GGGGGTAGTTGACTCTTTGTCTATTATGTCAACATTTGTTCAAAAGGTTT
GAATCTCAGATCCCCAATCTGATATTGTTCCGTTAATCATTATTGATAAA
CAATAGTATTTATCAGAGTAGCTTTTAACCTTGAAATAAGTACAAAATTC
AAGCAAGCATCAATTCCTTCTAACTAGCTATTTATACAAATATTATGTAG
ACCCATATTTACTATATAAGTGCGGTATTAAGAGCGACAAGTCAACGTCA
ACGATTTGCATGAATTATTATTTTTATAATAAAGGCAATAAATTTTTGAC
AAGCCTGTTTTTCCCTTACTTATTTTTTGAATTACGTTTGCTGGAGGTTG
AGGCGTGCGCCACCCTTGCCAGTATTACGTTACCATTTTTTTATATCAAT
ATGTAATACAAATACTCCTTTTCAGCAACAACGAACTTGTTTAACTCCTT
CAACTTTGTTTCTCCTTAGTTTCGTTTTGAAATAGTTCCTAATAAAAATA
ATCATTACAGTTAAAATATATCCGTTGGGACTTGATCATTATTTGGATTG
TTTTGGATGTCTCATCGATCCTTATGGACTGTTTAATACCTATCTTAGTA
CAATATAATGGGATTTTCTGAGTGATGAGGTTAAAAGGGAGTATCGTTGA
GAGGTGTTGAGGAGTGTTGATGTCAGTTGAGAATTGACAAACATCAAAAA
GGGATAAGTTATTCATTGTGTCGTCCATCAAGAAGAGTTGAAGTGAAATA
AAACGGAGMGGAACAAATTCAGTCTTCAAGTCTTTTTTTTGCTATTCTGT
CCTGTCTTCCGTGATCCTCTAATTCCAACCAACAACAACGGAATGGCCTC
CGTCGTGGCAGMAGACGACATTCAAAGCTATCAGAACCAAACGGCGGCTG
ATATTGAGAGTGGGCGTCATCGAATGGATTCTTACGGCTCTGGAGGCTCA
GAAGACGCTCTTTTGTCGGATGTTGCATATCGATCCCCAAGGCGATGGCC
TTCAGAACATGCTCCTCTACTACAAAACGGAAATAGACGGCCTCATCCTC
TCTACGAGGACATTGATGAGACCACTAACGTTTTTCCAGGTCCTTAGTAC
TTTACAGAAATAATGCTTAGTCTCATAATCATTATGTACTTACTATTTGT
CCWKAAAAGGCATGGGGGGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAAGGAAAGGTATTTACCGTTTCCAGTGTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAG
GAGGAGGAAAAGGGATTACGTTTTCCCAGTGTCATTCAAATTAAATCTTT
TGTTATATTCTTGTACATGAACTTTGATTGTGTTGTGGGGCTCTAACATG
TGTAAAACTATATTTTCTTTCTTATCATTGTGACTGTTATCCCATTACAA
AGTTTATTTGACACATTTATCGCATTTGGGAGGGAGCATAAGTGCATTTC
CTTAGACAAATTTCTTGTTTTTCCGTTTGACAATAACAATTAGTTAGATA
TTTTCTAATGAACCCCTCGGATTTCCTAATTGTTTCCACCCTTATTTGAA
ACACTTAAACAGAAACGCACATCTTAATTATGCAATTAATTCTAATGTGT
CATTTTTCTCATTAAAGGTACCCATTATTCCAAATATGACATTAATTAAA
GAATTTGTACATACAAATGTCAGAGACAATGTTTTTTACATATTTTGTGG
GGGAAATATCCCGAAAAATTGTATAACATGGTTTTAGAAAAGGTGTTGGA
TGGATCATTCTAAAGAAACAATTGTAAATTAATGTTAAATATATAGAGTA
ACATGATTTGATTTTTCATTCTTTAAACGTAAAAGAAAAGAGGCATATTT
TATAGGAACGTAAAAAAAAAAGAAAATCTGATTATAATGCTCTAGTTAGT
AAAACAAATTATATTCATATAAGGATTCATTTGTTTATATAATTTCTTAA
CCAATCAAAGGGTTATGTATAGATCTTTAAGCTCTTATACATTATGAAGC
TAATGTCTAGCTCACTTGGTTGGCAGCAATTATGATTATGTCTATGATTT
TTCTTTGCCGTTTTTTTAAATTTTTAGAAATTTATGTTCAAATTTTTTTA
TAAGACATATTCTTGATGATTTTTTATAAAATTTTTGACACCAACCCGTG
TTTTTGTACTAAATATTACAGATTTTGCTTTCAACATTACATCATATTTT
TTCGACTGATATACCATTTCCSCCCCCCCCCCCCAAGTGTCATTTACTTT
TTAACGGGTAACCCTATAAAGGATATGAGGAGACGATTTATCAAGTACAT
TGTACATTCATTGAATAAGTTTTTCACTTACTGTAAATGTTTTTATATTG
GATTATATTTATATATTAATGAAATATAAGTACATACATGGAGATTCTTC
TTTAACAGTTCTCGAGAGAGAAAAAGAGAGAGAAAGAGAGCGAAAAAGTA
ACATAGTGGCGTGGAAGCCACAAGTGTGCGTACTCTACTATTAAAAGATG
ATGAACTTAATCAGACTTCGCTACTTATATATGTTTTAGAATCCAATATT
GTATTTCTTTTTCAGTACTTTTTCTGTCATATAAGTGTTAAATACATACT
TGTAACAGAGGATTTTCTCTTCCTCTTTATTTGTAGTTTGTGTTAGAACT
TTACCAAGTGTCATGAGCAAATAATTATTATAAACGCCCATTTTATAAGA
CAAATTTTTTAGTGAATTTTTATACTCTTGCTACTTACTCTTCTGACTTC
TCTCCTTATTTTCCTTTTCTAAGACATGATCAATGAAAGTTACGAGAGCA
ATGATGAACATACTAGGATCTCTCAAACCATGCAACCAGACTATTTTTCA
ATACCATGGAATGATGATTTTAGTAATGGAATAATAACCTTATTTATATT
ATATATTATTTATTGGAAATGCATAATGTGACTCCATATGATGTCATTTC
ATTATTTACAGATGATCCCCATTTCACTGAGGTAGTTCGTGCTGCAGAGA
CAGCCATTGACAATGGAATCTATCCTCAAAGGATATACCAGGGGAGTAGT
GGTAGCTATTTTGTCAAGAACAGCGACGGAAAGACAATTGGAGTTTTTAA
ACCCAAAGACGAAGAGCCCTATGGTCGATTAAATCCTAAATGGACCAAAT
GGATGCACAGACTATGTTGTCCTTGTTGCTTTGGTCGCTCATGTTTGGTG
CCGAATCAGGGTTACATGTCCGAAGCTGGTGCAAGTCTAGTCGATACGAA
GCTATCACTCAATGTTGTCCCCAAAACTAAGGTTGCATTCTTTATTTTAT
TTTTTTAACTATATGTAAAGTCTAGTATCGAGTTATGTTTAATCAAGCAT
GTCATTATTATTCATTGATTATAACTTCTATTACCTTTTAGATTGTCAGA
TTAGCGAGCGAGACATTTAATTACCTGCGCATTGATCGTGAAAAAGTTAG
AGCTAAGCATATTGTATCAGAGCATTTCCCAAAGGTTGGTCGAAGGTTTC
ATAGGTTGGGTTTACCTCCGAAAGTAAGATATACATATATGTACTTTTTT
TCTCCATTAAGCCTTGGTTGTATTATTATTTATTATAGGTTGGCTCATTT
CAATTATTTGTTGAGGGCTATAAAGATGCAGATTTTCAAAYCAAMCGCTT
TRAAGCCGATAAACTTTCGGAGGAAACTTCTAAGGAATTCCAGTTGAAAT
TCGAAAGACTAGTTGTCCTAGATTATATAATTCGCAATACAGATAGAGGC
AATGACAACTGGCTCATAAAGCATACGAAAGAGAAAAAAGACTCAGAGGA
ATCAGAAAGTGTAAGGCATATTACTGGATCATCCACATTGTAATATGTGG
ACATCATCAACAACAATCTCTCACCTTTTTGTATTCATTTTAGATACCTG
AAGCAGTCGATATTGCTGCTATCGATAACGGATTGGCCTTCCCATTTAAG
CATCCAGACTCTTGGAGAGCTTATCCTTATCATTGGTCCTGGCTCCCTTG
TTCGAAAAAGGAATTCTCTGACGAAATCAAAGAACTCGTTCTACCAAAGC
TTTCAGATATGAACTTTGCCCAGGATTTATGTGATGAACTTTATAATCTA
TTCAAAGTGAGTTCTTTGTTCTTCATTAAAAAAATATTTATAGATTTATA
TCTTCTTTTTTTTCTTTAGACGGATAAGGGTTTTGATCGACACTTGTTTG
AGAAGCAAATGAGTGTAATGCGCGGTCAAATTTTGAATTTAACACAGTCA
TTAAAAGACAATCTAAGTCCCTTTAAATTAGCACAAATGCCAGTTGTTGT
GGTAGAAAGGTATATATATCATAATTAGTTTATTAATGATATTCTCGCCT
ATTTAATTTATAACTTGTGTTTCCATAGATCTAGTGGACGAGTGGGAACG
ACGGAAAGGTTCAGGGAGTTTAGTGATACGTTTACGCAGCGGTTTCAAAG
CAAAGGACCCTTCTTTTCATGGTGCTAAAATACATCCTGCAAAATTCTTT
ATTTCTTAATTACTATGATTGAAGAAGCTACACTTCTTCATCTCCTCCTA
TCGCATCGTTTCAAAGTTATAAGGCCATATTCTTATAATATTATATGATT
AAACAAAATATCTACATACTTTGAGGCATTCAAAAAAATAGAGGAGGAGA
ATTCTTTATTTTTATTTTGAATAAAGAAATATTGTTTTCTGTTATTACGG
CAAGTTTGAACACTGCAAATATTACAATTTTGGACTATAGATATACATAC
CTATGTTAAATAAATTCGACTTCCTACGATTTTATGGCTAAAATTTATAT
TGCCAAAAAGGATCTTTTTAATTTAATCTACATTCATATGCTTCGTCTAT
AGATCGACTATGATAATTATAATTCTTTTTAAATGTTATTAATTATTTTT
TAAATTTACTTATCTGTATTCAAAAATATTTTTATATTAATGTGTCAAAT
TATAATACTTTCCTGAAAAATACATTTATACATATACTTTATGTTTATTC
G

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