EMLSAT00000004959, EMLSAT00000004959-700806 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000004959
Unique NameEMLSAT00000004959-700806
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s260supercontigLSalAtl2s260:1301416..1302273 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000004959 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000004959EMLSAG00000004959-687725Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000021730EMLSAE00000021730-730658Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780609auto780609Lepeophtheirus salmonispolypeptide
EMLSAP00000004959EMLSAP00000004959Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000004959

>EMLSAP00000004959 ID=EMLSAP00000004959|Name=EMLSAP00000004959|organism=Lepeophtheirus salmonis|type=polypeptide|length=285bp
MDDYLREDYRGDEEISDDEGCGNSXSDDEEAXACDSHGKINIQKLMERME
SKKCPSSTRRQDDPPEEEEEEELDDFEKEMRIEFESRAQDAKSSFMPSTS
NNSASANDSSTSTKKTYDDIYFDSDEEEESGSGIKDKKSNDELLYDPGED
DRDQAWVDSIRRSYQNESSKNKKTKAAPSEVKPLPNSDAVLNCPACFAVV
CLDCQRHDVYKNQYXAMFVMNCTVDTSKGLAYTDSKKSIKNKKKMGIETE
EELYNSVKCDACQTQLAVYDKDEIYHFFNVVSSHS
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mRNA from alignment at LSalAtl2s260:1301416..1302273-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000004959-700806 ID=EMLSAT00000004959-700806|Name=EMLSAT00000004959|organism=Lepeophtheirus salmonis|type=mRNA|length=858bp|location=Sequence derived from alignment at LSalAtl2s260:1301416..1302273- (Lepeophtheirus salmonis)
ATGGACGATTACTTAAGAGAAGACTATCGGGGAGACGAGGAAATTAGCGA
TGATGAGGGATGTGGAAACTCTRCATCCGATGACGAAGAAGCTKAAGCCT
GTGATTCCCATGGGAAAATTAATATCCAAAAACTGATGGAACGGATGGAG
AGTAAGAAGTGCCCATCATCGACGAGAAGACAAGATGATCCTCCTGAAGA
AGAAGAGGAGGAGGAGTTGGATGATTTTGAGAAGGAAATGAGGATTGAAT
TTGAGAGTCGAGCTCAGGATGCCAAATCCTCATTTATGCCTTCAACCTCA
AACAACAGCGCATCGGCTAATGACTCTTCTACTAGTACTAAAAAGACCTA
CGATGACATCTACTTTGACTCGGATGAAGAAGAGGAAAGTGGATCCGGGA
TCAAAGATAAAAAAAGCAATGATGAACTATTATACGATCCCGGAGAAGAC
GACCGTGATCAAGCATGGGTGGATAGCATACGACGATCTTATCAAAATGA
AAGTTCAAAGAATAAAAAAACAAAGGCAGCTCCATCCGAAGTAAAACCAC
TGCCCAATAGCGATGCAGTCCTCAATTGCCCTGCCTGTTTTGCTGTTGTG
TGCCTAGATTGTCAAAGACATGATGTGTACAAGAATCAATATSGAGCCAT
GTTTGTCATGAACTGTACCGTTGATACTTCCAAGGGACTCGCATATACAG
ACTCTAAGAAATCCATTAAGAATAAAAAAAAGATGGGAATTGAGACTGAA
GAAGAGCTGTATAATTCAGTGAAATGTGATGCTTGTCAGACTCAACTCGC
AGTCTATGACAAGGATGAAATATATCACTTTTTTAATGTTGTCTCTAGTC
ATTCCTGA
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