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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s260 | supercontig | LSalAtl2s260:968006..971181 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000005028 >EMLSAP00000005028 ID=EMLSAP00000005028|Name=EMLSAP00000005028|organism=Lepeophtheirus salmonis|type=polypeptide|length=553bp
MQPMILVLKDGTETAQGKSQIISNINAXEAVSNAVRSTLGPRGMDKLIVN
DRGIATISNDGATVLRLLNVVHPAGKTLVEIARSQDSEVGDGTTSVVILA
GEFMKCCKSFIEEGVHPRLIIKSVRQATTLSIEKIKELSVSIPDGKRDLL
EKCAATALSSKLIHQQKGFFAKMVVDAVETLDPLMPLNMIGIKKVQGGSL
EDSSLVPGVAFKKTFSYAGFEMQSKHFKNPKIALLNVELELKAEKDNAEV
RVDNVEEYQKIVDAEWAILFDKLDALVKCGANVVLSKLPIGDVATQYFAD
HSMFCAGRVTEEDLNRTMKACGGTIQTTVNGXCDENLGRCELFEXNQVGG
ERFNFFTGCTKSRTCTLLLRGGVEQFMEETERSLHDAIMIVRRAMKNDRV
VAGGGAIEMELSKYLRDYSKTIKGKEQLIIGAIAKAYEIIPRQLCDNAGF
DATNILTKLRQKHSQSLNRRSEGGIGHNWYGVDILTEDIADNFAACVWEP
SIVKINAITAASEATCLVLSVDETVKNPRAAQGDQGMGGGMPGMGRGRGR
PMM back to topmRNA from alignment at LSalAtl2s260:968006..971181+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000005028-700875 ID=EMLSAT00000005028-700875|Name=EMLSAT00000005028|organism=Lepeophtheirus salmonis|type=mRNA|length=3176bp|location=Sequence derived from alignment at LSalAtl2s260:968006..971181+ (Lepeophtheirus salmonis)
TTTAAATTATGTTTGGAATTCTCCTTTGGAAACGCCGCAAATTCCAAATT
AAAGTAGCAAATATTCATCGTCACAGTAAAATAATTAGAAATTGAAGTTT
GTGTATTTGAAAGGGTCCATAATATCGGTGGTAAATTAAGTTTTCTAAAA
CTCAGCATAATAGTTAGCATTCGTGGGTATCTCAACTCATACCAGAAATT
TGAATTACAAGTCTATAAGTAAGCGAAATATGTGGATGAAATATTGGAGT
AAAGGTATTTATGAGGTAAAAAAATTAATTGGACATATTTTCTTGATTTT
TCTTAAAGATTGTTATTGTTTGATTAAACTCACACCATAATATTATATAA
GTATCTTGTTTTACTCTTCCAAAATTACAATCTGCACATTATTATATGAT
AAAAAGACATTTATTTATCGCTTCCATTAAATCAAGTAACTGAAAATGCA
AATAAGCGAAAAAGTAGTCCATTTTTGTTAGCTTTCATCATTATTATTCA
TTAGAAAAGTCGATGGCATTTGAATGAAAGATGTATGAAGGAAATTTCCG
GTAGTTAATAATCATATGCTTGTAAACAAGAGCCCAAAAGCATGGATTTG
TCCATGGTATGTATTAATATTATTAAGTAAAAAATAATTATTCTATACTC
CCATAGAATATGAAAGAAGGAAGGAAGGAGTAGGTCGTAGGCTGGGCGCA
GGCGTGTACTAGTACTAGACGAAACAAGTAGGGGGAGGAGAGTGAGAGGT
TTCGTGATACATTTTCTGCGTAGTGTGTGAAATTTGAAATCCCTCAACCT
CGTCCCGGCTCCCTAAGTTTCTAGACCTTTCCACGCTATTCTCGACACAT
TCATAATATTCTCAGGATGCAGCCCATGATTTTGGTCCTCAAGGATGGCA
CGGAAACGGCCCAAGGAAAGTCACAAATCATCTCCAATATCAATGCCMGT
GAGGCCGTCTCAAATGCGGTTCGATCCACTCTCGGACCTCGCGGAATGGA
CAAGCTCATCGTGAATGATCGTGGGATTGCCACCATTTCCAACGATGGAG
CAACTGTTCTTCGACTTCTCAACGTGGTTCATCCCGCTGGAAAGACTCTG
GTGGAAATCGCCAGGTCCCAAGGTAAGAATCCAGGTGAATCTCAGGGATT
GGCCTTTGACCCGTGTCTTTGTTATTTGCAGACTCTGAAGTAGGAGACGG
AACCACCTCCGTCGTGATCCTCGCAGGGGAGTTTATGAAGTGCTGCAAGT
CCTTCATTGAGGAAGGCGTTCATCCCCGCCTCATTATCAAGAGCGTTCGC
CAAGCAACCACGCTCTCCATTGAGAAAATCAAGGAGCTCTCCGTCTCTAT
CCCCGATGGAAAGCGGGATCTCTTAGAAAAATGCGCTGCCACTGCTCTTA
GCTCCAAACTCATCCATCAACAAAAGGGATTCTTTGCGAAAATGGTCGTA
GATGCCGTCGAAACCCTGGATCCTCTCATGCCCCTCAACATGATTGGCAT
TAAGAAAGTGCAAGGAGGATCCCTCGAAGATTCATCCCTAGGTAATGTCG
CATACACCTAATTGAATTTATCAGACTCACATTCTCTTATCTACATAGTT
CCTGGCGTCGCCTTTAAAAAGACCTTTTCCTATGCCGGATTCGAAATGCA
GTCCAAACATTTTAAAAATCCAAAGATAGCTTTACTCAATGTTGAATTAG
AATTAAAGGCTGAGAAGGATAACGCAGAGGTCAGAGTTGACAATGTGGAA
GAGTATCAAAAGATTGTTGATGCCGAATGGGCAATCCTCTTTGATAAATT
GGATGCATTGGTTAAATGTGGAGCTAACGTTGTTTTATCCAAATTACCCA
TTGGAGATGTCGCGACACAGTATTTTGCTGATCATAGTATGTTCTGTGCT
GGACGTGTCACGGAAGAGGATCTTAATAGAACCATGAAGGCCTGTGGAGG
AACCATTCAGACGACCGTCAATGGCTTMTGTGATGAAAACCTTGGTAGAT
GTGAATTGTTTGAGGYGAATCAGGTTGGMGGAGAGAGATTCAACTTCTTC
ACAGGTTGCACAAAGAGCCGGACTTGTACATTGTTGCTGAGAGGTGGCGT
TGAGCAATTCATGGAAGAAACAGAAAGATCTCTTCACGATGCTATTATGA
TTGTCAGGCGTGCAATGAAGAACGATCGTGTCGTTGCTGGTGGCGGMGCC
ATTGAAATGGAATTGTCCAAATACCTCAGAGATTACTCAAAAACCATTAA
AGGAAAAGAGCAACTCATCATCGGAGCTATTGCAAAGGCTTATGAAATCA
TTCCTCGTCAGCTTTGTGATAATGCTGGATTTGACGCCACAAATATTCTC
ACTAAACTCAGACAAAAACACTCTCAGGTGAGGCTAATTTGGTTTATATT
TTTACATATTTGCATGATTTGTCATTTCCACAATTGTAATAGAGTTTAAA
TCGTCGTTCTGAAGGAGGAATTGTAAGTTAAAATGAGTTGTCTTTAACCT
TCCTTTGTTGATGATTATTTGTCAAATCTTTTATTTATACATATGAGACG
GACTGTCTCTTAGGATTATTTAGTTTCTGTTTGAACAATCAAATGATAAT
GGAATATCTGTTCCCTTTTTCTTTTCGTAATTAGATTTTTTTACAGTGCA
TTTGAAATGTATCCTTTATTTTATTTTTACTTTTTCACTTGAATTGATTA
ATTAATTACTTTCTCTCTATATGCTATAGGGACACAATTGGTATGGTGTT
GACATTTTAACAGAAGACATCGCAGACAACTTTGCTGCCTGTGTTTGGGA
ACCATCTATCGTCAAAATCAATGCCATCACTGCTGCATCAGAAGCAACTT
GTCTAGTTCTGAGTGTCGACGAAACGGTTAAAAATCCCAGAGCAGCTCAA
GGAGATCAAGGTATGGGAGGAGGAATGCCTGGAATGGGGCGTGGTCGTGG
AAGACCCATGATGTAAATCTTATAAACAAAACGAACTCGCGTTATAATAC
TTCCATACTTTATATTAAAATAAGAATTGAGAATTCTCATTTATTGTGTA
ACCAAGCTCTACTTATTTAAGCACTTCTTTCAAGGATCTCGTTGCGAAGG
CTTGTTTTATTAATAACACACTCTTAACGTTGAATTAATCAACTAACTTG
ATAATAAAAAATTCAATATCCAAATT back to top
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