EMLSAT00000005293, EMLSAT00000005293-701140 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000005293
Unique Name	EMLSAT00000005293-701140
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s282	supercontig	LSalAtl2s282:382491..385246 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000005293 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000005293	EMLSAG00000005293-688059	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000023129	EMLSAE00000023129-732057	Lepeophtheirus salmonis	exon
EMLSAE00000023130	EMLSAE00000023130-732058	Lepeophtheirus salmonis	exon
EMLSAE00000023131	EMLSAE00000023131-732059	Lepeophtheirus salmonis	exon
EMLSAE00000023132	EMLSAE00000023132-732060	Lepeophtheirus salmonis	exon
EMLSAE00000023133	EMLSAE00000023133-732061	Lepeophtheirus salmonis	exon
EMLSAE00000023134	EMLSAE00000023134-732062	Lepeophtheirus salmonis	exon
EMLSAE00000023135	EMLSAE00000023135-732063	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto777094	auto777094	Lepeophtheirus salmonis	polypeptide
EMLSAP00000005293	EMLSAP00000005293	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s282:382491..385246-

protein sequence of EMLSAP00000005293

>EMLSAP00000005293 ID=EMLSAP00000005293|Name=EMLSAP00000005293|organism=Lepeophtheirus salmonis|type=polypeptide|length=455bp
MPLPYDIKDVIEEQIPFSQTMNLRKRHIGPSCELFFRSDPIKIIRGQGQY
LYSERNEEFLDSINNVCHVGHCHPDVVRAGQNQMAILNTNSRFLHDNLVL
YAKKLTSKFPEKLEIVFFVNSGSEANDLALRLSKSHTQSEEVIALEHAYH
GNVRSLIEISPYKFAKGYTPPSTVHIVPVPDTYRGKYRNDKYTEEECANH
YANEIKTVIDSLENEGKKLGCFIAESLQSCGGQVIYPQGYLRKVYDHVHE
NGGVVIADEVQVGFGRVGSSWWAFETQGSDLVPDIVTLGKPMGNGHPVAA
VVTTKEIADSFCSREKEYFNTFGGNPVSCAISNAVLDVIEKENLMKKAQE
NGDHLITEFKKLSQKYDIIGDVRGWGMFVGXDLVKDRTTREAHTSPAKFM
VQRLREEKILAQYDGPYCNVLKFKPPLAFTKENCDRLIQTMDRIFEEMLE
INFED

mRNA from alignment at LSalAtl2s282:382491..385246-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000005293-701140 ID=EMLSAT00000005293-701140|Name=EMLSAT00000005293|organism=Lepeophtheirus salmonis|type=mRNA|length=2756bp|location=Sequence derived from alignment at LSalAtl2s282:382491..385246- (Lepeophtheirus salmonis)
ACTATAAACAAAATGCCTCTTCCATACGACATCAAGGATGTGATTGAGGA
GCAAATACCCTTCAGTCAAACCATGAATCTGAGAAAAAGGCACATTGGAC
CCTCTTGTGAACTCTTTTTTCGTTCAGATCCTATTAAAATCATTCGTGGT
CAAGGTAGTTACGAATTCAATTAATTATGTTACTAACTAATTCTGAATAA
TTACATATTATATAAATACTCATATTTGTCAGTAAGAACATTTAGTTCCG
AGGTACCTACTATTTTAAACTAATGGAAACTATTATGCCCATTTATCAAT
GCAAGATATTATACTTAACCATAAAATTTGACTCAATCGTTTGACTCTTA
TAAAAAAGAGACATTATTACTTACATCACAGAAATCCCTCTGTGACCACT
AATTGTATTCAAACTACGTGAATCATTCATTAGTCTTTAATCACTTTTAT
TTTAGAGTTAATCAGCTTACATTGTTTGCAATTTGATCTTTTAGTTGAAT
ACATGTTCCAGGTATATGTTTTTACATGATATCAAGCCGTCAAACGATAT
TCTCCAATCTATTTGTAAAGTAATCTTTGAAAACTAGTTAAAAAAAATAT
GTAAATATCTTTTCCTGGGGTAATGAATTTTTCAATTAAATTTTCAAAGC
TCAAATGAAATTTATAGTTCTGTTCTTGATTAATAGTACTCACTACTATA
TCTATTTTTTATATTCAATTTGCTAGAATGTTGCTGTAGTCGAATACGTA
TCGACCCCACTATGACTATGAATATACATATAAACAATTTTTCAAGATTA
TGCTCAAAATTATCTAGATTTTCTTTATTGATCCATTTTATTCTTAAATT
TTATTTGACAAATTAATTAATTATATGCATTAATTTATTTATAAATCAAT
GTCCATTAATTAAAAAAATAAAAAGTTTATTTTAAAGAATTATGTTTAAT
GACATCGACACTGTTTGAATCAATATGTCTATAATCACACCCCTTTTTCA
AATTTTGATATACTTATTAATATATAAACATATCATATTTTTGTAGATCA
ACTCATTAATTAATTCCAATTAAATTAATTTGTTCATAGGTCAATATTTA
TACAGTGAACGGAATGAAGAATTTTTAGACTCTATCAATAATGTTTGCCA
TGTCGGGCATTGTCATCCAGATGTGGTTCGAGCAGGTCAAAATCAAATGG
CCATACTCAATACTAATTCTAGGTATAAGGGTCTCTTATGCATTTATTGT
GTAGTGATAACTATCTGGGCTAATACTCATCTATGTAATATTATTTCACC
TCTAGATTTCTGCATGATAATTTAGTTCTATATGCGAAGAAACTAACCAG
CAAATTCCCTGAGAAATTAGAGATTGTTTTCTTTGTTAATTCAGGGTCTG
AGGCCAATGACCTGGCACTACGCCTATCTAAGTATTTATTTGAGTACATC
AACAGTTTTCTTTTTATTTGCTCTTAATATATATTATAGATCACATACAC
AATCTGAGGAAGTGATTGCCCTGGAACATGCTTATCATGGAAATGTCCGC
TCTTTGATAGAAATATCCCCGTACAAATTTGCTAAAGGATATACTCCTCC
TAGTACGGTTCACATTGTTCCTGTACCAGATACATATAGAGGCAAATACA
GGAATGACAAATACACGGAGGAAGAGTGTGCAAATCACTATGCAAATGAG
ATCAAAACTGTAATTGATAGCCTTGAGAATGAAGGAAAAAAGTTAGGGTG
TTTTATCGCTGAGAGTCTTCAAAGTTGCGGAGGTAACAAAACTCAAAATA
TTTTCCATTCTAAATTATTCTATTGAATTGTATTATTTCATAGGTCAAGT
GATTTATCCCCAAGGATATTTGAGAAAGGTTTATGACCATGTCCATGAAA
ATGGTGGGGTTGTTATTGCTGATGAAGTTCAGGTTGGGTTTGGACGMGTA
GGTTCTTCTTGGTGGGCATTTGAAACTCAGGGCTCTGACCTTGTTCCTGA
TATAGTAACTCTTGGAAAGCCCATGGGAAATGGACATCCTGTTGCAGCTG
TCGTTACCACGAAAGAAATTGCTGATTCGTTTTGTTCAAGAGAGAAAGAA
TACTTCAATACATTCGGTGGTAATCCCGTGAGTTGTGCCATCAGTAATGC
CGTCCTTGATGTTATTGAGAAAGAAAATGTAAATATTAAACATGATTATG
TATACATTTAATCTTAATTAATCATTTACTTACATATTTCAATTTATGAT
TCATAGATTAGTCTAGCCAATGATTAATTAATTATATTGTTATCAGTTAT
GCAAATTATATCACAATTTATTAATGACGAATCAATCATTTTCAGCTAAT
GAAGAAAGCACAAGAGAATGGAGATCATCTCATAACAGAATTCAAAAAAC
TTTCTCAAAAGTATGACATTATTGGAGATGTGCGTGGTTGGGGAATGTTT
GTGGGAGMAGACTTAGTGAAGGATCGAACAACGAGAGAGGCACATACGAG
TCCTGCAAAATTTATGGTCCAGAGACTTAGAGAAGAAAAAATACTAGCTC
AATACGATGGCCCTTATTGTAACGTTTTGAAATTTAAGCCACCACTAGCT
TTTACCAAGGAGAATTGTGATCGGTAAGATTAATAAAAAGTATGTTTGTT
TTGTTTGAAACCATTTATCATTATAATTATACCTACATATTTCAGATTAA
TTCAAACAATGGATCGTATTTTTGAGGAAATGTTGGAAATAAATTTTGAA
GATTGA

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