EMLSAT00000005557, EMLSAT00000005557-701404 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000005557
Unique NameEMLSAT00000005557-701404
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s29supercontigLSalAtl2s29:313463..313858 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000005557 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000005557EMLSAG00000005557-688323Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000024267EMLSAE00000024267-733195Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776255auto776255Lepeophtheirus salmonispolypeptide
EMLSAP00000005557EMLSAP00000005557Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000005557

>EMLSAP00000005557 ID=EMLSAP00000005557|Name=EMLSAP00000005557|organism=Lepeophtheirus salmonis|type=polypeptide|length=131bp
MNTISTLVLAMIGASVVVLAQRPPTDQSYLLPNEYESILFNPISTSFSCE
GQQYGYYADVDNNCQIFHICLPIEDDAGFVIETAHFSFICGNQTIFDQQT
LTCNHIDDAFPCNEAPSLYNAVEFGKIPDQF
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mRNA from alignment at LSalAtl2s29:313463..313858+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000005557-701404 ID=EMLSAT00000005557-701404|Name=EMLSAT00000005557|organism=Lepeophtheirus salmonis|type=mRNA|length=396bp|location=Sequence derived from alignment at LSalAtl2s29:313463..313858+ (Lepeophtheirus salmonis)
ATGAATACCATCAGCACTTTAGTACTTGCTATGATCGGAGCTTCCGTTGT
CGTTTTGGCTCAAAGACCACCAACAGATCAATCATATCTTCTCCCTAATG
AATATGAATCCATCCTTTTCAACCCCATTTCCACCTCCTTCAGCTGCGAA
GGACAACAATACGGATACTACGCTGATGTTGACAACAACTGCCAAATCTT
TCACATTTGTCTTCCCATTGAAGATGACGCCGGATTCGTCATTGAAACCG
CTCACTTCAGCTTTATCTGTGGAAACCAAACCATCTTTGATCAACAAACC
CTCACTTGTAACCACATCGATGATGCTTTCCCCTGTAACGAGGCTCCTTC
TCTATACAACGCTGTTGAATTTGGCAAAATCCCTGACCAATTTTAA
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