EMLSAT00000006012, EMLSAT00000006012-701859 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006012
Unique NameEMLSAT00000006012-701859
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s326supercontigLSalAtl2s326:50134..54814 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006012 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006012EMLSAG00000006012-688778Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026216EMLSAE00000026216-735144Lepeophtheirus salmonisexon
EMLSAE00000026217EMLSAE00000026217-735145Lepeophtheirus salmonisexon
EMLSAE00000026218EMLSAE00000026218-735146Lepeophtheirus salmonisexon
EMLSAE00000026219EMLSAE00000026219-735147Lepeophtheirus salmonisexon
EMLSAE00000026220EMLSAE00000026220-735148Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770648auto770648Lepeophtheirus salmonispolypeptide
EMLSAP00000006012EMLSAP00000006012Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006012

>EMLSAP00000006012 ID=EMLSAP00000006012|Name=EMLSAP00000006012|organism=Lepeophtheirus salmonis|type=polypeptide|length=483bp
MNVVHPTIEYINEVIQRQNGTAGFIEISQNWKELNVTTLDLIHLFSNFPD
KTYLGDNFSSYYIDEKEYMCNLTGFYKSYRKIHGWLSICVCIFGTIANLL
NIAILTRKEMNSSPINLILTGIAIADMLVMIEYIPFTLHRNLLTGRSKEA
EYSWEFSLFVWSHSNFSLVIHAVSIWLTLSLAVWRLIMIQFYTLSPIYCT
IKRCKILLTLAYIIPIFICVPNYMATTINKKKNDGKVIYVLDWSEIATAH
NKLLYRINIWLYTFLLKLIPCVILTIITGWLIKALYIAEERSARLKEKVH
TGGSRNNIIVTILNESGKAKGSLTSRKRDTDRTTRLLVVILILFLLTEFP
QGILGMLSAVYGDQFFRDCYLPLGDVMDAMALINSSINFILYCAMSQQFR
KTFIQTFNCFSSKVINSPNIRLTNHKSFAHINNYSVNKKITLGPSRKSTH
NKINRYETQIEIYSLNKTHLQIHSIPEMDENIL
back to top

mRNA from alignment at LSalAtl2s326:50134..54814+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006012-701859 ID=EMLSAT00000006012-701859|Name=EMLSAT00000006012|organism=Lepeophtheirus salmonis|type=mRNA|length=4681bp|location=Sequence derived from alignment at LSalAtl2s326:50134..54814+ (Lepeophtheirus salmonis)
ATGAATGTGGTTCATCCAACAATCGAATATATCAATGAAGTTATTCAAAG
ACAAAATGGAACAGCAGGATTCATTGAAATATCTCAAAACTGGAAGGTAT
TATTTACTTTATTTATTTAGTCTAAATGAATTGATTGAGATCCACTTATT
ATTAATACATTTTTATTTTGTCGTAGGAACTAAATGTAACAACGCTGGAT
TTGATACATCTTTTCTCTAATTTCCCGGATAAAACATACCTTGGAGATAA
TTTTTCTTCCTATTACATTGATGAAAAAGAATATATGTGCAATTTGACGG
GATTTTATAAGAGTTACCGCAAAATACATGGATGGCTGAGTATCTGTGTC
TGCATATTTGGAACCATAGCCAATCTCTTGAATATTGCTATTCTCACGCG
AAAGGAGATGAATAGTTCCCCAATTAATTTAATACTTACAGGTTATTGAA
TCATTGCATATGGGGCACTTCATATAAAATAGGGACAAAAAATTACAATT
TTGTCACCTGTTTTACCATCGATTTTGAAAAAAAAATTATAAAATGTTCC
TCATAGAAGATATGATTAACTACAAAGTTTGAACGTGAAATTGCATGTTC
TTCAGAAGTTATGAGTATTTCATTATTGTTCTCATTTATAGGGTTTATAT
TACACTAGCCCTATAAGACCTATACGGATTTTTTAAAATGTTTTTTCTAT
GTAAAGCATACGATTTTGGTTATTTTTGGTTCTTTGATTGATTCTATAGA
TATGGGTATTTAAAGTTAGAAAAAATAAATATACATATTTTCTTACAAAA
AAAAAAAAGAAACCTAAATTTAATTACGCATCAATCACTTTTTAACATTT
TATTTAAAACATATTTGATGTCAAAAAATGTAAATTTTATGCAGATATAA
AACTATAAAAAGTAGCTTGCTGTAATTTTTTACACATTTTGCAACGTCAG
TATTTTATAGGGAGAGTTAGGGGAGTTGAGTACAAGATACATTTTTCCAA
ATTGACTGTGTTTTTGATGCTGAAGTGAAAATTTTAAACTTATTTTGTTA
AAATGAGTTATAATCTTCATGTCAAAAGAGTTCTAATGAGATTTTTTCCA
TTCAGTATGTCTGTAATATATAAATGATGCACATATATTTAATATTTATT
TCAGTTTTGGGTGAGACTGGCAATTTTGTTTCCTGTAAATCACTGCGCCG
GTTCTCTTGTTTTGCATGATTTGACATTACCACTAAAAAACAATGGATTC
AGCTATATTCAATAAAATTTTGAATGTAACATTTAAAAATATGCCTATAA
GTATATTTAAAATTTAATTAAATTGGTTCATTGATTCAAAAGATAAAGAC
AATTATGTTTCTTACCGAATCTATTATGGAGATAGCGTAGTAAAAAAATT
ATACAGTCAAACATTAATCGAACCCTCATAACTTGTAAAGAGGATAATAG
AAAATATTTAATACATAATTTGGTAAAACATTGTGGAAGGACTATACACG
TTAACAGTAAGATGCAATTAAATTTTGAAAGTTAAAAGTCAATGTCATAC
AAAGCATTATTTTTTGCGGAGGGTTTGTGCTCTACCGGGTGCCCATTCTA
GTATACTATTGTATTTATGTTATCCAATTTGAGTTATATTCAACAATAGT
TAAGATAACATTATAATTTAGTATTTTTGTTGATTTTACCCTCTGAGTTT
GTTAATTTCGTTGTTTGGATTAATGTATTAATCACAAAAGTCATAAGCTT
TAATATTTAGAGGTCATCTTTGAAGTTAAGTAAATTCACAATTTTTGAAA
ACTTAATATTCATTGTTCCNTTATCATACAAATAATATTATATTTAAACA
TTTTTAGATGAACAAATCAACTTTAAAAAGTTTTTTACAAGTTTTCTGTA
AAACTTAATTTTAGGTAGAGTTAAAATGAAAGGATATTATAAAAAAAGGG
AAGGTACTGTGTGCCGAGTATAGAACACTTTTGTTTTTAATTTAAAAAAG
AATTACCATTACTTTGAAAAAGTGTATGTGAATTAAGAATTTAATATTTT
ATTGATGACTTTTTCTGTTGCTTTATAATCAACAAGTTCTCTAAAACTAT
CCAATAATTTTCAATTCAACGATAACGATATAACAATTGTTGTTTTTTTT
GTTTATTCGTTATTTTCTTAACTTCAAAGATGTTGAGCAACTTATTTTAT
GTTACTCCAGTGTGACAGTTGATGATATAAACATGTTTGCAAAAACTCAA
AAAAATCTTAACCTAAAAAAATCTAACTTTCAGATTGTTTCCTTGAACCT
TTTAATGTTTGGTGTTCTCGTAAAATATGTTTATCTTCATGTTATTCACT
TCAATTTATTATGTATTCAAGAGGATTAGAACCTACGAAAAAAATAAGAA
AGTTAAGGATTTTTATGAGATGGCCCCGAGTAAATATTTATAATTACTCT
TTTGCCATCCAAAGCCACTTCCAATTTAGTATAGGTAGGTAAGAAGATAC
AAAAATATATAGGCTTTTTAGGCTCCCTAGCTTCTTTATATGAAGTTTAT
GTATTGTCTTMAATTGTTACATTGGTTATGGCATTTGAGATAAATGGAAA
TCTAACTACATCACCCCTCCCCCCCCCCCCTCCTTTTTTTCCTCAACTTT
AGTCATAAATCTTTCTTCTTTTATGAAATTCAAGCACTTAAAGTGCTGAA
TACATAATTTGTATTGAGATACAATTTTTGCATTTAATTCTTAAAAATAA
GAACGCCTATTGTAAGTTATGATTTTTTTGTTAAAAATTAAATTTAGGGA
AAAAAAATATTGTTAAGATTAATTTTTGTTATCAAAAATGTGTGGTAGAC
CAAGACATGCAAAAATTTGTTTATTGACATTTTAAAAATGTTAACCACAA
TATATTAATCCTTTATTTCATTACTATTGATTATTGTAAACTAAAATAAA
AATTGACACATACGGAAAAAGGAAAAATGCCGTTTTTTCCCTAAGTATCT
AGAGTATCATGCATTGATTTAGGCAACAAATTGGGAGGGGGGGGGGATGT
AAGGCTAAAAAAAATCATGATACATGGATTAACATCTTAATGTGGATCGA
TGATATAAGCGAGTAGATTAGTTTCTGTTTGAAAAAAGTTGATATCTAAT
CTAATATCTGTTTAACATTAATAAATAATAAAATCATCAATCTATTTTAG
GTATCGCAATTGCAGATATGCTCGTGATGATTGAGTACATTCCATTTACA
CTCCATCGGAATCTTTTGACAGGAAGGTCTAAAGAAGCAGAGTATTCGTG
GGAATTCAGTCTTTTTGTGTGGTCCCATAGTAACTTTAGTCTCGTAATTC
ATGCTGTCTCAATATGGCTTACACTTTCACTTGCTGTGTGGAGACTCATC
ATGATACAATTCTATACACTCAGTCCCATTTATTGTACAATCAAAAGGTG
CAAAATCTTGTTGACCTTAGCATATAGTATGATACAAATCTATTTTATAT
AGAAAAGTAGAATATATATAAATCCATTTTCAGTAATCCCTATATTTATC
TGCGTTCCCAACTACATGGCAACGACCATCAATAAGAAAAAAAATGACGG
CAAAGTCATTTATGTGCTAGATTGGAGCGAGATTGCCACTGCGCACAACA
AACTCCTCTATCGCATCAATATTTGGCTCTATACATTTCTTCTCAAACTC
ATACCCTGTGTTATACTCACAATCATTACAGGTTGGCTCATTAAGGCACT
CTACATAGCAGAAGAACGTTCAGCTCGACTCAAGGAGAAAGTTCATACTG
GTGGTAGTAGAAATAATATAATTGTTACTATTCTAAATGAAAGCGGTAAA
GCAAAAGGATCACTTACTTCACGAAAGAGAGACACTGATCGAACTACACG
ACTCTTGGTTGTCATTTTGATCTTATTTCTTCTGACTGAGTTTCCACAGG
TTATCCTTAAATTATAAAATTTACACTTAATTCAGCTAAGACTTCCATTA
TATATTTTTAGGGAATTCTGGGAATGCTTTCAGCAGTTTATGGTGATCAA
TTTTTCAGGGACTGTTACCTTCCACTAGGAGATGTGATGGACGCAATGGC
TCTCATAAATTCTTCCATCAATTTCATCCTCTACTGTGCAATGTCCCAAC
AATTCAGAAAGACATTTATTCAAACCTTTAATTGCTTCTCCTCTAAAGTT
ATTAACAGCCCAAATATACGACTGACAAATCATAAAAGTTTCGCACACAT
AAATAACTACTCAGTAAATAAGAAAATTACTCTTGGTCCATCTCGTAAAA
GCACTCATAACAAAATAAATAGATACGAAACACAAATAGAAATCTATTCC
CTTAATAAAACACATTTACAAATCCATTCTATTCCTGAAATGGACGAAAA
TATTTTATAATTACATACTTGATATATTTATTTAGCTGTTTGAATGTGTA
TAATGAGAGAGAAAAAAGTTGTTACATCGATATATTTCTGCTTACTGAGC
CATATACCATTATAAAAAATTGAGTTTTTTTTACTAATAATACAATAGTT
CATATCTGTAACTGTAACATGGAATTTACTTTCATCCGCCATTTAGAAGT
AATTTTGGAAAGTTAATAGATGAAATTACTGAAGGAATCAGTTTAANTAA
GGATTTTCATGATTTGGAAAGAAGCTTCTAG
back to top
Add to Basket