EMLSAT00000006145, EMLSAT00000006145-701992 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006145
Unique NameEMLSAT00000006145-701992
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s336supercontigLSalAtl2s336:255956..258115 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006145 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006145EMLSAG00000006145-688911Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000026847EMLSAE00000026847-735775Lepeophtheirus salmonisexon
EMLSAE00000026848EMLSAE00000026848-735776Lepeophtheirus salmonisexon
EMLSAE00000026849EMLSAE00000026849-735777Lepeophtheirus salmonisexon
EMLSAE00000026850EMLSAE00000026850-735778Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775389auto775389Lepeophtheirus salmonispolypeptide
EMLSAP00000006145EMLSAP00000006145Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006145

>EMLSAP00000006145 ID=EMLSAP00000006145|Name=EMLSAP00000006145|organism=Lepeophtheirus salmonis|type=polypeptide|length=303bp
MIVLKSRWKKDHFIHESPHWLIQKGEYSKALDSFMYYGRTKDEAQFEFLE
YKDEYESKVRDAHGSKKPKDIPLMQKWSHNLRRWKEPGFYKPLIYLCIYG
SLIELSSMVTIVTYMVIIFQKTGSPFDPYFASTLICFIRIFATLIGTKLM
HQIPKRDLFVAVGSFTVVVLASLGFFCWISSPEEKERFACIPLILISLIF
VGFSLGYGTIFHCLMGELFLPGLKSLSSAIVYSCVLGTSFVIVKYSLSLI
ELLEIHGLFWLFAGVASITTLHGWLFMPETTGKSLQEILKYYSCDKSPKA
TRV
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mRNA from alignment at LSalAtl2s336:255956..258115+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006145-701992 ID=EMLSAT00000006145-701992|Name=EMLSAT00000006145|organism=Lepeophtheirus salmonis|type=mRNA|length=2160bp|location=Sequence derived from alignment at LSalAtl2s336:255956..258115+ (Lepeophtheirus salmonis)
ATGATAGTCCTCAAATCACGTTGGAAGAAGGATCATGTATTGCATCTATG
AGTATGMTGGGTGCTGTTTTTGGATCTATGCTATGTGGATGGTTAGTGGA
CGTGATTGGAAGGAAAAATGTCTCATTTTTGACTGTGTTCTCTACTTTAN
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TATTAAATTGGCGCATAGCTTGTTCAATTCCATTGATATTTGTGCTCATC
GCTTTTATAGGACTACAAGTAAGACTTGATCTACCTCATCGTCCATGGGA
TTTGAATCTGTAAATATATAATCAATTTCTAATACTTTTAGTTTATTCAC
GAAAGTCCTCATTGGTTAATACAAAAAGGTGAGTACTCCAAAGCTCTTGA
TTCCTTCATGTACTACGGCCGAACAAAAGATGAAGCGCAATTCGAGTTTT
TAGAATACAAGGATGAATATGAATCTAAAGTTAGGGACGCCCATGGATCG
AAGAAGCCAAAAGATATCCCTTTGATGCAAAAATGGTCGCATAATTTGAG
AAGATGGAAAGAGCCTGGTTTTTATAAGCCTCTCATTTACCTATGTATTT
ATGGCTCTCTCATCGAGTTGAGTTCAATGGTGACCATCGTCACTTACATG
GTTATTATATTTCAAGTGAGTCTCACAGCATTTTGCTTCCTTTTATTTTC
ACTCTTAATCCACATATGTTTCTCTTATATATATAGAAAACGGGATCTCC
TTTTGATCCATATTTTGCTTCTACTCTTATTTGTTTTATAAGAATCTTTG
CAACGCTCATTGGTACCAAATTAATGCATCAAATCCCTAAAAGGGATTTA
TTCGTTGCCGTGGGTTCCTTTACAGTCGTAGTATTAGCCTCTTTAGGTTT
TTTCTGCTGGATCTCCTCTCCGGAGGAGAAAGAAAGATTTGCATGTATCC
CTTTGATTCTCATTAGCTTAATATTTGTGGGATTTTCTCTTGGATATGGA
ACCATTTTTCATTGTCTAATGGGGGAGCTATTCCTTCCTGGCTTGAAATC
CCTGAGCAGTGCCATTGTTTACTCATGTGTTCTTGGAACCTCATTTGTGT
AAGTACCTACTCATCAAAAAATAACTTTTGTTTTAATTTGTTTACTTACA
GAATTGTGAAATATTCTTTATCTCTCATTGAGCTCCTAGAAATCCATGGA
CTATTTTGGCTATTTGCTGGAGTCGCCTCTATTACCACTCTACATGGGTG
GTTATTTATGCCAGAAACCACTGGAAAGTCTCTACAAGAAATTTTAAAGT
ATTATTCCTGTGATAAATCACCTAAAGCTACACGAGTTTAACCACTCTTG
AAGAAATAATGGATCCTTTTGGCTGAAATTAGAATGAACTTGAAAAACAC
TCAAAATTTGTTTTTCATAAAAAATAAAAACAGAGACAACTTGTAAATAT
TGTCAGAAAAAAAATTATTTAAAAATGAAAACTGGACTGCATTATTTCAT
GATCAACGCCGGATTCGCTCCAAATCATTCCTCATAATTAGTTTCTCTGT
ATATCGGATG
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