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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s336 | supercontig | LSalAtl2s336:458196..464487 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000006157 >EMLSAP00000006157 ID=EMLSAP00000006157|Name=EMLSAP00000006157|organism=Lepeophtheirus salmonis|type=polypeptide|length=1288bp
MTSKGSPSIKHNAIITPRILLDSNLLPSSEHQIVRPTPLRAPFAPNIYDP
NGDKQLSGFVKPSPGYVCERTPPERDNSTSKIKDQGFVTNVMIDRSCSIA
DSGYQILEDDDDEDEELQYSGSIPTHQHPSITQGKSSLMKYKPKRKQSSF
DKSHHEEDLSKTLEKANRLLDVKAALEQMTVSNKKKKKSGKGSPPSTSSS
SSSSDEDECDEDLDDGSTNVLLVRHSDKTQXXRHXPNSNATSAATASNNS
SSSNPSGKKTQRKVLSQETLNTTVTSAGDEFVWIDSHNRLVELQSVPWNN
DDIRSALPKRGNGNKDRISLDLLPRLSYYLQRVLVRLSREIQRLSKPIGK
CGTAEILSAIKITLSPSSSKSAIKACLRAAAMFAISGDATRQTKSARAGL
RLRVGKVHQWMTLVKLGRFVHETAAIYLTAAIESVLEELVLFCYEYHSKN
TSRESSPNSSVFNNTNSSNTSQHSSPSLMNKASTPLLSASLLEQAVSVNP
DYWGLFQPYAHLGIGRTSSGTLVVPSIFSSDSSLHGLNNHKSKTGKSLDQ
ILLTTCVGSVTELEEMVSLITNLYGNLGAGNTAPNSVRRSGRKTPPLSWS
QEALNAFYHFMRCSQLEYVGEEGRAPIQELVYERPYVVLPPLMEWVRVSS
VFCEHRGAQLIDKNDVMQAARILLPGMDYPIRLPFASAIHSSPPELLDEL
QYVNNVKLDTAFKMLLSGRRDLIPHALQMLPGGPGSKLNTPNSEGYTFLQ
LAAIQGDTDVLKFLVETGAEVDSHTQFRKWSPLCYAALTGNIRLVKYLLE
KGASVEGCSNTTTETPLQLVAGNGSCRIAELLLAHGASPFYTADEDSVDN
LTLVSQDGCVSAISVAAIHGHRRLLHTLVTHVLTTPPESSLHSGGENQVL
SLEEILAEGSTSLEENTKPCDPGSKPANKSFINKLSKQHIKKLQEAMYHA
SESGNLEITLDLRNMSVPWTLHTWLLSVAGIDSSSNRMSGYLDELLQDFL
TEWQQHDEQNSKYFIEEGLSLLFSMFRNCKSEGTLLLLADIFSACYGRSQ
ISPIITRSSNIGGADTPVNMNGKRSSSSLSTHSSSSNPANTPPTPAPRID
PKFVNNPELSDVQFRVDGRIFYAHKLVLVTASSRFQSMINSRYCEGIPPV
LQINDIRYDIFHLVMVYLYNGGSEXLSVKPSDVLELMAXANFFQLPGLLE
TCEARCADLIDLDNIVSYYIHAKVYSANSLLEYCEGFLLQNMAALLTYDE
SVKRLIFGKKLQSHDVLSGLLSTLQKRMTSTRSGGVGK back to topmRNA from alignment at LSalAtl2s336:458196..464487+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000006157-702004 ID=EMLSAT00000006157-702004|Name=EMLSAT00000006157|organism=Lepeophtheirus salmonis|type=mRNA|length=6292bp|location=Sequence derived from alignment at LSalAtl2s336:458196..464487+ (Lepeophtheirus salmonis)
GTAACATGCATAAGATATCACTCCTAAAAAGAAAAATACGCTATGCATGC
AAAGAAGAGAGCCCATTGATTGAATATGCATGTAATAGACATTCATGGAT
TTGAACCTCAGCCCCTTCTTCTTTTAATATTAGACACGTGCTGAGTACTC
GAGTATGTTACTTATGTTGTATACTGCCTCCTCCATTCTCCTTGAAAGGG
CTTTGAAGTTGGAAAAGTGTAGGATGTTTCTCTTTAAAAATAAACCATCA
TGGTTTGTATGTATGTACATAGGCGGMGGTGGTTCTTGTAGTAGTAGAGG
TGATTCCTACGGCTGGCCCGTTGAATTCCTTCAAAGTTATTATTGTTATT
TTAGTGCGTAGTGGTGGAAGATTTCAGTAGTCGATATGAGTCGAACCTTG
GTTAGTCCTGAGACCGGGGTGATGGAGTTTTTACATTCATGTCTTTAACA
AGTGCAGTGTATTTTGTTTTATTAATTAATACTTAAAATTACAGACTCTT
TTTTATGATATAATTATTATATTACGTATGTCATTTGACAATGACGTCTA
AAGGATCTCCATCCATCAAACATAATGCCATCATCACGCCGAGGATACTC
CTGGACTCTAACCTTCTTCCCTCATCAGAACATCAAATTGTTCGTCCAAC
TCCTCTTCGTGCACCATTTGCACCAAATATCTATGATCCCAATGGTGATA
AACAGTTGAGTGGTTTTGTCAAACCCTCACCGGGATATGTATGTGAACGG
ACCCCTCCTGAACGAGATAACTCAACTTCTAAAATTAAGGACCAAGGATT
TGTTACGAATGTAATGATTGATCGTTCCTGTAGTATTGCGGACTCTGGCT
ATCAAATTCTAGAGGACGATGACGACGAGGATGAGGAGCTCCAATACTCT
GGCTCAATTCCTACGCATCAACACCCATCCATAACTCAAGGTAAACATTA
TTAACCTTATTCAACGTCACTGCCCCCAATCTTCATATATCTCCCTCTCT
TTCAGGGAAGTCGAGTCTCATGAAATACAAACCCAAACGAAAGCAATCTT
CATTCGACAAATCTCATCATGAGGAGGATCTAAGTAAAACCCTAGAAAAA
GCAAATCGTCTCCTTGATGTAAAGGCCGCCCTTGAGCAGATGACTGTCTC
TAACAAAAAGAAAAAGAAAAGTGGAAAGGGTTCGCCTCCTTCTACTTCAT
CTAGTTCATCGTCATCTGACGAGGACGAGTGTGACGAGGATCTAGATGAT
GGATCAACGAATGTTCTTCTCGTACGGCACTCTGACAAAACACAATKCRC
CCGTCACARCCCCAATTCCAATGCCACATCTGCTGCAACTGCCTCCAATA
ATAGCAGTAGTAGTAACCCTTCTGGCAAGAAGACTCAACGCAAAGTCTTA
AGTCAGGAAACCCTCAACACAACCGTTACTTCAGCAGGAGATGAGTTTGT
ATGGATCGATAGTCACAATCGTCTTGTGGAACTTCAGTCAGTGCCATGGA
ACAATGATGATATTCGATCAGCCCTTCCGAAACGTGGAAATGGGAACAAA
GATCGAATCAGTTTGGATCTATTACCGAGGTATATTAAGTTATTTTAACT
AAAATATTGAAATCTGTAATTTTCCCAAAATTAATTTAGAATTTCAAGAT
AGACCCATTGTATTCTACTCATTTGTTATATCATGTGTACATAAAATCTA
TCTACATTACATATTTCCACGGCATATTTCTTTTTTGCCTTGTTTATTGT
ATCAAGTTATCATCCGCCTATGGGTGAAATAGAGATTTTTATAAATGTAT
ATTATTTTTCTTGTTTAGATGGGTCAGGTCTTTGATGAACACAATTATTA
TCATAAAATATTTCTTTTTAGCTCTTTCACATTTTATTTGTCTGTGTAAT
TGGTAGTGAAAATTTACACGGATCATTGATTCTAATATAACTCATTAGAA
GTTTCACTTTTTTAAGACTATAAATATGTAACAAAAAGTTATATAATTGA
TGTTTCATTTAAGGAGGAAGTATATGAAACGAGCTTATGGGAGAGCTCTT
TTTAATTTACTTTCGTATCCAGATGGTCTCTAAATATTTACTAATTATAT
TATGTAGTCGTAACTTATGGTTGGAATGACCATACTAACAATTAAATCAT
TTAACCCTTTGTCTCTTCCTTTATAGATTGTCATACTACTTGCAACGCGT
TCTTGTTAGACTATCTCGAGAGATTCAACGACTCTCCAAGCCTATTGGAA
AATGTGGAACAGCGGAAATTCTTTCAGCCATAAAGATAACATTATCTCCA
TCATCATCCAAGTCTGCCATTAAAGCTTGTCTTAGAGCTGCTGCAATGTT
TGCAATATCTGGCGATGCAACTCGACAAACTAAGTCAGCTCGTGCAGGMC
TCAGACTCAGAGTTGGAAAAGTGCATCAGTGGATGACTCTTGTCAAACTA
GGGAGGTTTGTTCATGAAACTGCAGCTATATACTTGACTGCAGCTATTGA
GAGTGTTCTCGAGGAACTTGTTCTCTTTTGCTATGAGTACCACTCAAAAA
ACACCTCACGAGAGTCCTCTCCCAATAGCTCTGTCTTTAATAATACCAAT
AGCAGCAACACCAGGTAGTAAATATTATATTTTCTTAAGTATGTCATTTC
ATTAACTCTGATTTTGTATCCCTTTAGTCAACATAGTAGTCCTTCTTTGA
TGAACAAAGCAAGCACACCTCTTTTATCCGCATCTCTCCTTGAACAAGCT
GTTAGTGTTAATCCAGACTATTGGGGATTATTTCAACCTTATGCTCATTT
AGGTATTGGGCGCACTTCTTCTGGAACACTAGTTGTTCCCTCCATTTTTT
CGAGTGACTCTTCCTTACACGGCCTAAACAATCACAAATCTAAAACAGGG
AAATCCTTGGATCAGATCCTTTTAACGACATGTGTTGGATCAGTGACGGA
GCTAGAAGAAATGGTGAGTCTCATCACAAATCTGTACGGTAATCTTGGAG
CAGGGAACACTGCTCCAAATTCAGTGCGCAGATCTGGTAGGAAAACKCCG
CCTCTGTCTTGGTCGCAAGAAGCCTTGAATGCTTTCTATCATTTTATGAG
ATGTTCACAACTTGAGTATGTTGGAGAAGAGGGAAGAGCTCCTATCCAGG
TATTTAAATATTATAATGTTATTTTAATTACTTAATGAATCAAGATTACA
TTTCATTATGACATTAGGAATTGGTTTATGAGCGGCCTTATGTGGTTCTT
CCCCCTCTTATGGAATGGGTCCGTGTTTCAAGTGTGTTTTGTGAACATCG
AGGAGCTCAACTAATTGATAAAAATGATGTCATGCAAGCGGCAAGGATTC
TACTKCCAGGAATGGATTATCCAATACGTCTTCCATTTGCCTCTGCCATT
CATTCTTCCCCTCCAGAACTATTGGACGAACTTCAATATGTTAATAATGT
TAAATTAGATACTGCCTTCAAAATGCTTTTGTCTGGAAGAAGAGATCTGA
TTCCTCACGCTCTGCAAATGCTTCCAGGTGGCCCTGGATCTAAATTAAAC
ACTCCTAACTCTGAGGGGTATACGTTTTTACAATTAGCGGCAATACAGGG
TGATACTGACGTATTGAAATTCTTGGTTGAAACTGGGGCAGAAGTAGATA
GTCATACTCAATTTCGAAAGTGGAGTCCTCTCTGCTATGCAGCTTTAACA
GGAAACATTCGTCTTGTCAAATATTTGCTAGAGAAAGGAGCAAGTGTTGA
GGGCTGCTCTAACACAACGACAGAGACACCGCTTCAGTTAGTTGCTGGTA
ATGGAAGCTGCCGAATTGCTGAGCTTCTATTAGCTCATGGTGCATCTCCC
TTCTACACGGCAGATGAGGATTCTGTCGACAATTTGACTCTTGTGTCTCA
AGACGGTTGTGTTTCTGCAATATCTGTTGCTGCAATACATGGACATCGGA
GACTTTTGCATACTCTTGTTACACATGTCTTAACTACTCCTCCTGAGTCA
TCACTTCATTCAGGTGGAGAAAATCAAGTCCTTTCCTTGGAAGAGATCCT
TGCAGAGGGATCCACTTCCCTTGAAGAAAATACGAAACCCTGTGATCCAG
GTTCAAARCCTGCCAATAAGAGCTTCATAAATAAGTTGAGTAAACAACAC
ATTAAGAAATTACAGGAAGCCATGTATCACGCTTCTGAGTCAGGTAATTT
AGAAATTACATTAGATCTAAGAAATATGAGTGTTCCTTGGACACTTCATA
CGTGGCTCCTAAGTGTTGCGGGCATTGATAGTAGCAGTAATCGAATGTCG
GGATACTTGGATGAACTATTGCAGGACTTTTTAACCGAGTGGCAACAACA
CGACGAACAAAACTCCAAGTATTTTATTGAAGAGGGTCTCTCCCTTCTCT
TCTCCATGTTTCGAAACTGCAAGTCAGAGGGAACTCTCCTTCTCTTGGCT
GATATATTTTCAGCCTGCTATGGACGTTCTCAAATAAGTCCAATAATTAC
CCGATCCTCAAATATAGGAGGMGCTGATACTCCTGTGAATATGAATGGCA
AACGCTCTTCCTCTTCTCTCTCAACCCATTCATCATCCTCGAATCCTGCC
AATACACCTCCAACGCCTGCTCCAAGAATTGATCCTAAATTTGTCAATAA
TCCGGAGTTAAGCGATGTACAATTTCGAGTGGATGGCCGAATATTCTATG
CACATAAATTAGTCCTCGTTACAGCCTCGAGCCGATTTCAATCTATGATT
AATTCCAGGTAAAAGAAAACCCGTCCCTTTATGTGTAGTATTCAATCAAA
TTCTCCATTCATCAATCAAACTTGACTTAAAATATATGTCAATTGACATT
TTCAAATGTTCAGAAACGCGTACATACATAGGTTGATATATCACTACGTA
TTTGTACATCTATGATTCTTATCATCATTTTCACTTTTGCCATGAAGCTT
AATAATAACTTCTTTCTTGGAGAGATGATGACGAAATTGATGATCAAGTA
CCATTAGGAGTTAGTGGGAAAGTGTATTTCGTTAATATTTATATGGGTAT
ATTATGCAATATACTACATACACATTACTACTTCTACTAGATGCACTTAA
AATTTGCCAATTGTTATTCATTATTATATGTAATTCATGGGCTATTCTAC
TATATGCAGTATAAAGATTTCTTATTCATTTCCACTTTAATGAAAGTGAT
TCACCCTTAATTGAGTTAAATAACTCTTTAGTCAGTTACTTATGCCACTA
TTAAATACGGAATCTCCTTTGAGTACATGAGGGGTTGAGGTTGTTCATAC
ATGCCTTATTATACATTTACTAAAAGGGGAATCCAGCTCCTTAATAATAC
ATATGTATTATAATTTGATTAANNNNNNNNNNNGTAATTGTATTATCCCT
TGAAAGAAGCAGGGTCAAGGGGGACAAAAGCGTCGGAATAAATATTAATT
GCCTCCTTTTTCATTTCAGATATTGCGAAGGGATTCCCCCAGTCTTACAA
ATCAATGATATCCGTTACGACATCTTTCATTTAGTTATGGTCTATCTCTA
CAATGGTGGCTCCGAGMCTCTTTCAGTCAAACCATCTGATGTTTTAGAGC
TCATGGCTGSAGCTAATTTCTTTCAATTGCCAGGTCTTCTCGAGACTTGT
GAAGCTCGATGTGCAGATCTCATTGATTTAGATAACATCGTTTCCTACTA
TATCCATGCAAAAGTATACTCGGCAAATAGTCTTCTCGAATATTGTGAAG
GATTTCTCCTTCAAAACATGGCGGCTCTTTTAACGTATGATGAATCCGTG
AAAAGACTTATCTTTGGGAAAAAGCTTCAAAGTCATGATGTTCTCTCAGG
GCTCTTGAGCACTCTTCAAAAGAGAATGACGTCTACGAGGAGTGGTGGAG
TAGGGAAATAGAAAAGACTCATTTAGTGACGATCCTCATATTTTTCTTCT
TTGTATTGTTATGATTATTAATTATTTATACATATGTTTACGGTGTTGTT
ATAATTATAATCACTTGGATGTTCATCGTTATGTGTCTGCTTGTATGTAC
AATGTACTCGATTATCATCCTTGAATTGATCAGGAGGCGTGATGATACAT
TTTAAAAAATAACTCTCAGATATATTTCTAAATATGTAATATTATGTTCT
TTATAGAAATGCAAATTTGTATAATAAGAATTATACAACATATTTAAAAT
TATGTGTGTACATACGATTTATATACATAATGCGACATTTCCAATACTAT
GTTGTAATAAGTATATGGTAATCCCTCACTGCTTAGTGAGAG back to top
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