EMLSAT00000006421, EMLSAT00000006421-702268 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006421
Unique NameEMLSAT00000006421-702268
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s351supercontigLSalAtl2s351:146070..148406 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006421 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006421EMLSAG00000006421-689187Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000028026EMLSAE00000028026-736954Lepeophtheirus salmonisexon
EMLSAE00000028027EMLSAE00000028027-736955Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773236auto773236Lepeophtheirus salmonispolypeptide
EMLSAP00000006421EMLSAP00000006421Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006421

>EMLSAP00000006421 ID=EMLSAP00000006421|Name=EMLSAP00000006421|organism=Lepeophtheirus salmonis|type=polypeptide|length=103bp
MDKTWHAHHFSCYDCMKTFTPDMGYHEFEGRPYCEPCYTKTALPKCKGCS
SAITDKAMKALGGQWHIKCFVCKDCKTTFEGQKSFYSVEDKPICGACAGM
EGK
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mRNA from alignment at LSalAtl2s351:146070..148406-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006421-702268 ID=EMLSAT00000006421-702268|Name=EMLSAT00000006421|organism=Lepeophtheirus salmonis|type=mRNA|length=2337bp|location=Sequence derived from alignment at LSalAtl2s351:146070..148406- (Lepeophtheirus salmonis)
AACTGCGTTCGAGCCATGGACAAAACATGGCATGCTCATCATTTCTCCTG CTACGACTGCATGAAAACTTTTACTCCAGATATGGGCTATCACGAATTCG AAGGACGACCTTACTGCGAACCTTGCTACACAAAGACTGCCTTACCAAAA TGTAAAGGATGTTCATCTGCTATTACAGACAAGGCCATGAAGGCTCTTGG AGGTCAATGGCACATCAAATGCTTTGTTTGTAAAGTGAGTTTATTTATTT ATTTTTTGAATATAAGTTTTGAAAATTGAAAGTGGTTCACACACATGCTA TGGAAATCAGGGTAATTACGTTTGTATTTTATACAAAAAATTGATTTCTT ATACGAATCAAAAAAATTGAATTATATCTATCATTGGTATAAATTACATT TATTTGATTAAAATTGTAAAAAAAATCACGCATAAACTATTTTAAAAGAA CATTTATATAAATATTTTTGATAAATAAACGAAGTAATAACATATAGTAC ATTTATTCTCCGTTTCCAAAAGGACAAGCCTATTTTATTATTTATATGAA TAAATCTTAGCTATCATATACAAATAGAAATGTATAGCTTCGCTTTTACT AAAATATTTGTAAGCAATATCATAATATAGCATCGAAATAATTATGTATT TTAAAAATAGTGAATAAGTAATATGATAATGATTTACTCGGAGTACTTAA GATATAAATACCAGTTGGTAGGATTAACTTATTTGGCTATCTTGCAGATT ATTTAGGACCCTTTTCTTTTTATTTTAGAGAAAAGGTTGCGTCATACAAT AAAGGTAATGAGATGTAGGTTTGCAATAAAATAATTACATTTTATTGTCT AAAGCAAAAACAATATACATACATAAGCTTTTATGCGTGACATTTTTTGC TTAAATTATTTAACAAAGAAATTAATAATTTCAATTTGGCACACCATTCT TTCTAAAAATAATTCAGGGGTAAGAGATTGCAAAAAACGTCGTTATCTTG ATGTACATAGGTGTACATGGATATTTATGTAATAGTTAACACAGTTATAT AGACTCTGCGAAAGGGCGTTTTTCTTGATACAGTTATATATATATTGTAT ATACCATGTACATATGTATCTTTCTCAAAGAAAGGGCTCAGGCCTGAAAA ACAACCTGGATCAGGTTCCATGCTTGTAATTATTATTTTTATTGTTAATA CTACTGGTTAAAGAGTGATCTGTCTAAGAGTCAAAAAGACTCCGCCCTTT AGAGTAGACATGATAGGTACTTGTAACCTACACTCAAGTCACTTGTTGTA GAGGTTACATTCAATGAAGGGTCATTTTGAAGTAGGAGATCAAGTTATAA CGCCTACAGACATATTTCAAAAAATAAATACTAATACAATTTATGACTCT AGGTCATAAATTGTATCATAGTTGATATTTTTACTAAATCAAATGAACAA ATTTACACTAAGTCGACATGAAACATAGCTCTCAGAATAATCATCAAAGA CTTAATACGCACCTGCATTGAATAGTACTACTAGATGCTCATGATATTTG ATTTGAATCAAATCAAAGACTAATGAGCAAAAGGACAAATGGTTTCAGGC AAAATATCCTGGTCCAAATGACTGTACTCCCATTTTAGTGTCCCCCAGAA GTTGCAGCATTTTTAGGGGCCTTGTACGGCCCCTCACCCAGTTATAAAAT CATACATCTATGTACACTTGCAAAATCCTGTTCTCCAAAGGTTTTTGTTT ATTTTTTTCAAATTCTCCGATTTCATTTTTTCAAACACCATTATAAGGAA CTTTTTTTGTTAAATAAAATATGGGCCTTTTTTAAAGAAAGATCTAGTTT CATTTTTGAATGGGATGAAATATTATTTAATATTTGGAGGATTTTTTAGA GGTAAACTTTTTTCCCGTCTCTATAAACTTTGTAATTTAACTACGTTTTA TTCACACTCCCGTGGGCCTGCTTACAATGAAACTCCATATAATTTGCTGT AAATTGGCCAAACTTTAGCATTGAACTTTTATACCTATATTCTGGATTCA CTGATAAGACAAAAATGTCAATGGCAATGCAAATTTAACACCCGGATCTT AAACTTTATGGGATATTACTAAGGGGCCCTTACTTATGCATTGTGGGTAG AAATGAGAGCAAATTCTTCATGTATCATAAATTTTTGAAATAACGGGTTT TAATAAAAAATACATTTTAGTCTATTTATTTTTTATTTTTTTAGGATTGC AAGACGACATTTGAAGGTCAAAAATCATTTTACTCCGTGGAAGATAAGCC CATATGCGGTGCTTGTGCTGGAATGGAAGGAAAGTGA
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