EMLSAT00000006946, EMLSAT00000006946-702793 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000006946
Unique NameEMLSAT00000006946-702793
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s393supercontigLSalAtl2s393:601207..603901 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000006946 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000006946EMLSAG00000006946-689712Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000030514EMLSAE00000030514-739442Lepeophtheirus salmonisexon
EMLSAE00000030515EMLSAE00000030515-739443Lepeophtheirus salmonisexon
EMLSAE00000030516EMLSAE00000030516-739444Lepeophtheirus salmonisexon
EMLSAE00000030517EMLSAE00000030517-739445Lepeophtheirus salmonisexon
EMLSAE00000030518EMLSAE00000030518-739446Lepeophtheirus salmonisexon
EMLSAE00000030519EMLSAE00000030519-739447Lepeophtheirus salmonisexon
EMLSAE00000030520EMLSAE00000030520-739448Lepeophtheirus salmonisexon
EMLSAE00000030521EMLSAE00000030521-739449Lepeophtheirus salmonisexon
EMLSAE00000030522EMLSAE00000030522-739450Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778831auto778831Lepeophtheirus salmonispolypeptide
EMLSAP00000006946EMLSAP00000006946Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000006946

>EMLSAP00000006946 ID=EMLSAP00000006946|Name=EMLSAP00000006946|organism=Lepeophtheirus salmonis|type=polypeptide|length=644bp
MILQKLNFIQRSIIGRCASQRLSSTTPYPDVYEKEFQKSIKDPEEYWGNI
AQNTIWHKPWTRVLDNSNPPFSKWFVDAELSLVYNAVDRHVDEGFGSQTA
LVWDSPITNSKRSLTYSDLKKEVSQFAKVLRDTYDVKKGDRVIIYMPMIL
ETIIAMLAVARLGAIHSVVFGGFSAKELSLRIKHIEAKLVITASCGIEPN
RLIKYKPIVDEALIRAEVPELPVIVYQRENICQAELKPGRDSEWQDLIEG
ASVGDLDCVPVLSNDPLYVLYTSGTTGRHPGDAWFTYSDMGWAVGHGYVC
YSPLLHRNTSIVFEGKPAGTPDAGQFSRVIAENQVKGFFLAPTGLRFLKR
EDPNFEQGSKYPSNSLKAIFVGGERCDNSTKEWASHHFKVPILDHWWQTE
TAHPMTGHCIGLGNTLNPPKDSTGRPVPGFDIRVVDENGKNVANGEMGRI
VCKLPIAPGCLSTLYGNDEGFVGTYFSRFPGFYDTMDAGXIESNGYVKXL
ARDDDVINVAGHRLSISRLEEVLISHPDVVDCAVVGVRDELKGQIPIGLI
VLKKHFHQEDLSSLKEELVQQVRSNVGAVAXLKILLSVNNLPRTRSGKIT
RKCIADMAMGLSIKIPATIEDATVFDEIRQVLVENLNLDIPSPQ
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mRNA from alignment at LSalAtl2s393:601207..603901-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000006946-702793 ID=EMLSAT00000006946-702793|Name=EMLSAT00000006946|organism=Lepeophtheirus salmonis|type=mRNA|length=2695bp|location=Sequence derived from alignment at LSalAtl2s393:601207..603901- (Lepeophtheirus salmonis)
ATGATTCTTCAAAAGCTGAATTTCATCCAAAGGTCCATTATTGGGAGATG
TGCATCTCAGCGACTTTCATCGACTACTCCATATCCGGATGTTTATGAGA
AAGAATTTCAAAAATCCATAAAGGATCCAGAAGAATATTGGGGAAATATC
GCTCAAAATACGATCTGGCATAAACCTTGGACTCGTGTTTTGGATAATTC
TAACCCCCCTTTTTCCAAATGGTTCGTTGATGCTGAATTGAGTCTTGTTT
ACAATGCAGTGGATCGACATGTCGATGAAGGATTTGGTTCTCAGACAGCT
TTAGTATGGGATAGCCCCATTACCAATTCCAAAAGATCATTGACATACTC
TGATCTCAAAAAAGAGGTAATTATTTTCAAAAAGAGAATATCCAAGTTGG
TATTTGACTATTTATTTTTACAATCGGAATATTTAGGTGTCCCAATTTGC
CAAAGTATTGAGAGATACGTACGACGTTAAGAAAGGGGATCGAGTCATTA
TTTATATGCCTATGATACTAGAAACCATTATTGCTATGTTAGCTGTGGCA
CGGTTAGGAGCTATTCATTCTGTTGTTTTTGGAGGTGATGAACAAAACAG
ATTGAATTAAACCATTAATAACATATAATTTGTTTTAAATTGATTTCCAG
GTTTTTCAGCGAAGGAGCTATCTTTGAGGATCAAACATATTGAAGCAAAG
CTTGTTATCACAGCCAGCTGTGGAATAGAACCCAATAGATTAATTAAGTA
ATGTCAATGTTTTTGTAGAGGAGGATCCGTGATTAATTCTCTTTCTTTAA
AGATATAAACCGATCGTAGATGAGGCTTTGATAAGAGCAGAAGTGCCAGA
GTTACCTGTTATTGTGTATCAACGAGAGAATATCTGCCAGGCAGAATTAA
AACCTGGGAGGGATTCAGAGTGGCAAGATTTGATTGAAGGAGCTTCAGTT
GGGGACTTGGACTGTGTTCCCGTTTTATCCAATGATCCCTTATATGTTCT
ATATACAAGTGGAACCACAGGTAGACAGTATTATAGATGAAAAAAGTACA
TATTATTTAATTTTGTAGTGAAATAAAATCCTAAATACTCATTTAAGGAT
CCCCAAAGGGTGTTCAAATTCCCGTCGGACCTCATGCAGTTGTTAATAAA
TGGACGATGAAAGCTGTTTATGGGATGAAGAAAGTGGTTTTAATTCATAT
TTTATTAATTTTAAAAACAATTTAATTTTAATGACGCTCATTTATAAATG
AATGGATCTTTGGGGATCTAATTATAGTCATTTTATTTTTTATTACTCAA
CTCATTAAATTAAATCAAGCTATAACAATAATCATCATTAATGTAAATTC
TCCTTATAGTCCTGGAGACGCATGGTTTACATACTCTGACATGGGATGGG
CAGTTGGACATGGCTATGTCTGCTACTCACCACTTTTACATAGAAACACT
TCTATAGTTTTCGAAGGTATGTTGAATGGTGTACGAACGAAATTTCGTGA
CTCTAACTTATACATAAATATCCTCCTATTTATAGGTAAACCAGCTGGAA
CTCCTGATGCTGGGCAATTTTCAAGGTAAGTCTTTAATAGATAAAATCTC
AATTGATTAATAATCTTTGATTTCAGGGTAATTGCTGAAAATCAAGTTAA
AGGATTTTTCCTTGCACCCACTGGTTTACGTTTTTTGAAACGGGAAGATC
CTAATTTTGAGCAAGGCTCTAAATATCCTTCAAATTCATTGAAAGCCATT
TTTGTTGGTGGGGAAAGATGTGACAATAGCACCAAAGAATGGGCATCGCA
TCATTTTAAAGTTCCAATTTTGGATCATTGGTGGCAAACTGAGACTGCTC
ATCCCATGACTGGACATTGTATTGGTCTGGGTAATACTTTGAATCCACCA
AAGGATAGCACTGGAAGACCTGTCCCCGGTTTTGATAGTAACTGCTTAAA
GATAGATTGTGAATCCATTTCTTTATATAAGTTTTATTTTAGTTCGTGTT
GTAGACGAGAATGGAAAAAATGTTGCCAATGGGGAAATGGGTCGGATTGT
CTGTAAGTTACCTATAGCACCTGGATGTCTTTCAACACTTTATGGAAACG
ATGAAGGTTTTGTCGGTACTTATTTTTCTCGATTTCCTGGTTTCTATGAC
ACAATGGATGCGGGAGKCATTGAATCCAATGGCTATGTCAAGGKGTTAGC
CAGAGATGATGATGTTATTAACGTTGCAGGTCATCGATTATCAATCTCTC
GTTTAGAAGAGGTTCTTATTTCTCATCCTGACGTAGTCGACTGTGCCGTT
GTGGGTGTGAGGGATGAACTCAAGGGTCAAATACCAATTGGACTCATTGT
CCTTAAGAAACACTTCCATCAAGAGGACTTGTCTTCATTGAAGGAAGAAC
TTGTCCAACAAGTGAGGAGTAATGTTGGAGCAGTGGCAGSTCTTAAAATT
CTTCTTTCAGTAAATAATTTACCCAGAACTCGTTCTGGAAAAATCACGAG
AAAATGTATCGCCGACATGGCCATGGGCCTTTCAATTAAGGTATTTTTTT
TTCTCCCTAGCTTAAGTAAAAAAAAAGTTAAACAACATAATTTAAATTTT
AGATCCCTGCAACAATTGAAGATGCAACTGTGTTTGATGAAATAAGACAA
GTTTTAGTTGAAAATCTTAACCTTGATATTCCCTCACCACAATAA
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