EMLSAT00000007147, EMLSAT00000007147-702994 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007147
Unique NameEMLSAT00000007147-702994
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s402supercontigLSalAtl2s402:755960..758032 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007147 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007147EMLSAG00000007147-689913Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031407EMLSAE00000031407-740335Lepeophtheirus salmonisexon
EMLSAE00000031408EMLSAE00000031408-740336Lepeophtheirus salmonisexon
EMLSAE00000031409EMLSAE00000031409-740337Lepeophtheirus salmonisexon
EMLSAE00000031410EMLSAE00000031410-740338Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779594auto779594Lepeophtheirus salmonispolypeptide
EMLSAP00000007147EMLSAP00000007147Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007147

>EMLSAP00000007147 ID=EMLSAP00000007147|Name=EMLSAP00000007147|organism=Lepeophtheirus salmonis|type=polypeptide|length=472bp
MAEIEARLVPSSSPSIQNAIAHLPYIAPIPTNPNGNVCPTSKSTPPFLSS
KDAFLHPPNMEGKAHSILRGLENLGNKLGSNQERSIVSKIISEVLQVFSQ
IKDSLSPYPSVEPLTFIERYSSTRDWKNSPIRALRWHPQTSKIAVALSDD
SIQIHCLSLIVSPILKYKLQKSVSCLAWRPFSSSELAVGTESGILIWVVD
PSSVVARPSASCVTKLSPGRELPISSLEYDPSGQYLLACSPSEKDITIWN
TWKEDYVILRRFSSGGYHTASWSPCGRFAFTASTSNKIRLWNVNQHWSDE
VWNIQNGYVNSAVWSPCGKYLLFSTSEASQLFCITFGSSGESASAAVPIV
ELTFDEEDFKGQVQSIKWDNIGERLAVGFHNSDLIALFCSSNRPILSLSL
IGLIRGEPEEYPIGMDFHYRLKETDSTILTIGWSSGRIQHFPMIYTSIIS
EGNISLDITSHQFKPELFSSPL
back to top

mRNA from alignment at LSalAtl2s402:755960..758032+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007147-702994 ID=EMLSAT00000007147-702994|Name=EMLSAT00000007147|organism=Lepeophtheirus salmonis|type=mRNA|length=2073bp|location=Sequence derived from alignment at LSalAtl2s402:755960..758032+ (Lepeophtheirus salmonis)
TTTTGGCTGATCCAGCAATATATATATGACTCAATAGTGGCGTGACGGAA TATGAAATTTGTAACTAGCTGCCCTAATTGAATGTCGCAACGAATATTTC TTCTCACTCAACCTTTATTTTAAAAATTGAAAAACAAGGATGGCGGAAAT CGAAGCTCGTCTCGTTCCTTCCTCTTCTCCTTCGATTCAAAATGCAATTG CACACCTTCCATACATTGCACCGATCCCTACAAACCCTAATGGGAATGTT TGTCCAACGAGCAAGTCCACACCTCCGTTTCTCTCCTCCAAAGACGCTTT TCTTCATCCCCCTAATATGGAGGGAAAGGCTCACTCCATTCTTCGAGGGT AATTCAACATTTCAAGTGCTTATCTTTATATTATAACTGAGGTTTTAATC CTATAGACTCGAAAATTTAGGGAACAAACTGGGTTCGAATCAAGAACGGA GTATTGTATCTAAAATTATTTCAGAAGTTCTTCAGGTTTTTTCTCAAATA AAGGATTCTTTGAGTCCCTATCCTTCTGTAAGTCGACGCTCATAGTCCAT TCCAAATATCTAGTAATACTCCTTTTGAATATGCTAGGTTGAACCTCTTA CTTTTATTGAACGCTATTCATCAACACGAGACTGGAAAAATAGCCCCATT CGAGCATTACGTTGGCATCCTCAGACCTCAAAGATTGCAGTTGCTCTCTC TGATGACTCCATACAAATCCATTGTCTTTCATTGATTGTATCGCCTATCT TAAAGTACAAGTTGCAAAAATCTGTTTCTTGTCTTGCATGGAGACCCTTT TCCTCTAGTGAACTCGCTGTTGGTACTGAATCGGGAATATTAATATGGGT TGTAGACCCTTCTAGTGTTGTGGCACGTCCGTCAGCGAGTTGTGTTACAA AGCTTTCTCCTGGAAGGGAGTTGCCCATATCTTCATTAGAGTATGATCCT TCTGGGCAGTATCTTTTAGCTTGTTCGCCGAGTGAAAAGGATATCACAAT TTGGAATACATGGAAGGAAGACTATGTGATCTTAAGACGATTTAGTTCAG GAGGGTATCATACTGCTTCTTGGTCACCGTGTGGAAGATTTGCGTTCACA GCCTCCACTTCCAACAAAATACGTCTTTGGAATGTGAATCAGCATTGGAG TGATGAAGTTTGGAATATTCAAAATGGATATGTAAATTCCGCAGTTTGGT CCCCTTGTGGAAAGTATCTTCTATTTTCAACGAGTGAGGCAAGTCAGCTT TTTTGTATCACCTTTGGATCATCAGGAGAAAGTGCCTCAGCGGCAGTCCC AATTGTAGAGCTCACATTTGACGAAGAGGATTTTAAAGGACAAGTTCAAT CCATCAAATGGGATAACATAGGTGAAAGGCTCGCTGTGGGTTTTCATAAT TCGGATTTAATCGCTTTATTTTGCTCATCAAATCGCCCTATACTTAGTCT GAGTTTAATTGGTTTAATCCGTGGTGAACCTGAGGAATATCCCATCGGAA TGGACTTTCATTATCGATTGAAAGAGACGGATTCAACCATTTTAACAATA GTGAGTGTTTAGTGGCATTGGTTACAGCCCATTTTATTCATTATTACTTC TTTTGTTTCCATGACAGGGATGGTCAAGTGGACGGATTCAGCATTTCCCT ATGATTTACACTTCAATCATTTCTGAAGGAAATATAAGTTTAGATATTAC TTCACATCAATTTAAACCTGAACTTTTTTCGAGTCCATTGTAATGATATA TTGAAGACGTCGCTTATAGTAATATGCTGTGTTTTTTAATTTATTTTTTT TTACTACATCCTAGCTGTACTTTTTAATGCTTATGAACTTGAATCCATTT GATTCAAGGGGTAACTTATACTTTCTAATAAAGAAGAATCTTAACTTCAA GAAAACTTACAACCGATTATATCATTTCCCAATTTAACAGTTAATCTTCT CCATGCAGCTCTATTAAGGTCGTATTTCTTTCGGAAGTCTAAATTTTCAC TATTGTACTTCATTTTTAACTACTTTTTTTTCCATTATATTTTTTTATCA TACTTAATTTATATTTAAAAAAC
back to top
Add to Basket