EMLSAT00000007199, EMLSAT00000007199-703046 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000007199
Unique NameEMLSAT00000007199-703046
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s404supercontigLSalAtl2s404:395612..398302 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000007199 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000007199EMLSAG00000007199-689965Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000031619EMLSAE00000031619-740547Lepeophtheirus salmonisexon
EMLSAE00000031620EMLSAE00000031620-740548Lepeophtheirus salmonisexon
EMLSAE00000031621EMLSAE00000031621-740549Lepeophtheirus salmonisexon
EMLSAE00000031622EMLSAE00000031622-740550Lepeophtheirus salmonisexon
EMLSAE00000031623EMLSAE00000031623-740551Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777242auto777242Lepeophtheirus salmonispolypeptide
EMLSAP00000007199EMLSAP00000007199Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000007199

>EMLSAP00000007199 ID=EMLSAP00000007199|Name=EMLSAP00000007199|organism=Lepeophtheirus salmonis|type=polypeptide|length=222bp
MLLESILMSFFVLVPGHRLTPGSNYTYISPWNGQEYTSNMRPLVSLNIKE
LRENGPELGFDEEFLSRECVKSASHCMIEMKIKIRRQGEDDENIGFDFSK
PLGQRIIPGFKHSDYRTFENSAFEEEARIRKLENDRGLAFVHDAINEGME
SIKDSKSTVAYTVTVILSIIGAIAAVCVCIAVSVGCYIGCQADSNDDNTN
AEENVRLNEVKPHNDKTEENKS
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mRNA from alignment at LSalAtl2s404:395612..398302+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000007199-703046 ID=EMLSAT00000007199-703046|Name=EMLSAT00000007199|organism=Lepeophtheirus salmonis|type=mRNA|length=2691bp|location=Sequence derived from alignment at LSalAtl2s404:395612..398302+ (Lepeophtheirus salmonis)
CCAGCCGGCCATCTTTCTAGAAAATATCTATAGAATTAAAGAAGGAAAGA
ATGAAGAAAGGCTCAACTTTCTCTACTTCTTTTTCTATTATATGTTTGTG
TTTTGCCTATTTATTGGGATGGCAAAATGGTGGGTGACGAGCTTTTGAGA
TTGATCAACATCAGTCTAGTATAGGGAGAAAATCTAATGCTGTGAACATT
AAATTAATGATGAATATCATTGAATACATTAAATCAAATAAAAATTAATA
TCAAAAGCCCAAAGTATGCTACTAGAAAGTATTTTAATGAGTTTCTTCGT
GCTTGTTCCGGGACATCGTCTCACTCCAGGCTCAAATTATACATATATTT
CTCCATGGAACGGACAAGAGTACACAAGCAACATGAGACCCCTTGTGAGT
CTCAATATCAAAGAACTTAGAGAAAATGGACCAGAGCTTGGCTTTGATGA
AGAGTTCCTTAGTCGAGAGTGTGTTAAATCCGCCTCACATTGCATGATAG
GTCCTGTCATTCTACAATTTCATTTATACCTCATGATACATTAATTAATT
ATTTAAACTGTTATTTCTGTCGTTTTTATATTAAAATGGGATATCTATGA
GATAGACAGTCGCAATTCTACTGCGTTCATTTATATTGAGTACTTAAAAT
CCTTTTAATTGAATAATAATAGTGCAATTAAACATTGATGAATTTGTTTC
CTTGTCATAGTATCCCTTCCAGATTAAATTAAAGTCATATGGAAATGATA
AATACTATGTAAATACGTTTAAACGACAGGCAAAAATTAGATTGTACTCA
ATTCAAGTGACTTAATTTTTTTATATAAACTGAAAATAAATGATTTTGAA
GTCAAGTACTTGAAATTCAAAATTGTTTGGAATTCGAAAATTCTAATCCA
ATGTCAATTGCATAATTTATATACATATATTCACAGAAATGAAAATCAAG
ATTCGTCGACAAGGAGAGGATGATGAAAACATTGGTTTTGATTTCTCTAA
ACCTCTTGGACAGCGAATTATTCCCGGCTTTAAACACTCCGACTATAGGA
CCTTTGAGAATTCAGCTTTTGAAGAAGAGGCCAGAATAAGAAAATTAGAA
AATGATAGAGGTTTGGCCTTTGTTCATGATGCAATAAATGAAGGAAGTAA
GGAGAGTTGCGTATATATCGTATTCGTGTTTTTTAATCGATTATTTTTAT
ATTTATAAAAAAAAGTGGAGTCTATTAAAGATTCAAAAAGTACTGTTGCA
TATACAGTTACGGTTATTCTTTCTATCATTGGGGCAATTGCCGCAGTATG
TGTTTGTATTGCTGTATCAGTTGGATGCTATATTGGATGCCAAGCTGATA
GTAATGACGATAATACAAATGCTGAAGAAAATGTTCGTCTGAATGAAGTC
GTGAGTTATACTCCTTACTTTTAATATAATTAAAAAAAACAAAAACATTA
TGTATTTTCTAATTACAGAAGCCTCACAATGATAAAACTGAAGAAAACAA
GTCCTGATCGATTAATTAAAATTAAATGATAAATATCAAATCAACAAATT
GTGGCAATGAACTTACCTGATGAAATGGGATATTTCCAATATGAGATCTG
AGTGTATACATCCATTGAGGTCTCGTTTTAAGACAATTGACTCGTATGAT
CTTTGTTTTTCTCACATAAGCTATCCAAAAATTAAAACATCTATGTTCAT
CACTAGATAAATTCTTTAGCGATTCGTAGGGTAAAGAAACATTGGTCTCA
AATCTTCCCCGATTATCCGTTTGCTTATTTGTGATGGTATACGACGCAAG
TGCGTTTTTTTCTAAATTGAGTGAGATGTACATAATTATTAGTGTGAATT
CTAGTACTCATTAACCTCCAATCCTTGAATATTCAAGAAACAAATTGGAG
CGAGTCTCTCTAATTATAATAATAGATACACAAATTATGTTCATCTTTAA
AATCATTTMCGTGATGTCTCATTCCCTATCCGATCATGAGAGAATAGTCC
AATCCAGTCATCTGTAATCATTATGTTCTTAGGAGACTTCCAGTTTAGCA
CCAATCGCCTCTTGTCTGTGTATCCTAGCAAAGATACAGATGCCAATGGA
CTTAACGTTAAAAATACTTTTGCTTCATCATTGGAACTATTCCTATAGCA
GGATGTGTCTGTCAAATTTTAATGAGCCATTGTTACTATTATGTTATTAA
TTGATTTTAAGTGTTGTTGATAAGTAATTCTAATTGTAGTATCAATTAAT
TCTCCCCTCCCTCCTCATGGACCAAATTTTTTATTCAAGAATCAGATTTT
TTATATACATATAAATTTCCAATACTACTCAGATGAAAGGGCCACATTTT
GTTCTATAATTAATTAATTCTTCAACTCGTCTCGTTAATATTTTGCGAGT
GACATAGATACTAATTAGTATCCTTTTTGAATACACTCTCAGTATTGAAC
AACACACCTAAGTAAAATAATTAATATCTACCCCTCACTATAATTGTTTC
ATAATACATTATAAGATTCTAACCACAACTGAAAACGCTTATTTTTTATG
TCAGTTTCTTTGTTATCTTTAGATAGTTTAAAAAGTTTTCTCTAGCTTAT
AAATTTTTATTATTGGATAATTTAATTATTTCTAATTGTTTATTTCTCAG
AATAAATGTGCTTTATTAATAATTTGGTACTTACAATTTAT
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