EMLSAT00000008178, EMLSAT00000008178-704025 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008178
Unique NameEMLSAT00000008178-704025
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s490supercontigLSalAtl2s490:385888..388883 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008178 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008178EMLSAG00000008178-690944Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000036116EMLSAE00000036116-745044Lepeophtheirus salmonisexon
EMLSAE00000036117EMLSAE00000036117-745045Lepeophtheirus salmonisexon
EMLSAE00000036118EMLSAE00000036118-745046Lepeophtheirus salmonisexon
EMLSAE00000036119EMLSAE00000036119-745047Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777138auto777138Lepeophtheirus salmonispolypeptide
EMLSAP00000008178EMLSAP00000008178Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008178

>EMLSAP00000008178 ID=EMLSAP00000008178|Name=EMLSAP00000008178|organism=Lepeophtheirus salmonis|type=polypeptide|length=666bp
MGPNRFKREKRESTPFNDEPIVREEVPPEWRDIEAPINFTWVAQDELAGM
GWPKSRDQVRFCVEQGIDHLISLSPEKLPPSYAFPNLKWTLIPVEDFTGP
TIADIKKFITIMDEARKEGEAIGVHCAEGRGRTGVLCACYLIYYHEMKPW
DAIRIMRRQRPGSVERKTQEETVVRFWTLIQDYGKSKLEELEERDKELRR
KQKLMSLNNSLTTCTTENPLLGHTAKFFGPNSDARSERRCQRAKSMPKFN
QEEEEEVNFRQHMQSFFQSRQHRSHRHERRSRSQPHGKRSEKNQNSNRNE
RATTPGRSLVENLKPVHQRTRKLIEEPASNQNSNDLTKHFKDFMNSSSSI
NKQKARKPPRHPNKSVRGVDENDANIDNICIQEKPMRSQSSSKERKYIRG
MTETETNTHRSEKETSCPPSRSSSRSESPSMSEDSCSSDSCSNSSSRCSS
RRNSTCSSIQGSSSRSSSPYTSSSSSSEFSSSKKVPNSPPSFKPTYTVEN
ISSTTYDYYTRIRSRAAANRTESKKPMECYPSITNIPSQSTTSDSRFRRA
QTELSDRPYTSAYSTRNYSSVLNNYDIDQKYLSNRNINSNSPYNSSSSRS
ITANSIVVDRALSSLRCGNSSNILNRRFRTDKTLEYPTPLVRDSWKRTNQ
RFNYSRFVSTSPETFV
back to top

mRNA from alignment at LSalAtl2s490:385888..388883+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008178-704025 ID=EMLSAT00000008178-704025|Name=EMLSAT00000008178|organism=Lepeophtheirus salmonis|type=mRNA|length=2996bp|location=Sequence derived from alignment at LSalAtl2s490:385888..388883+ (Lepeophtheirus salmonis)
GTTTATTTGCCAATGTACATACAACAAGAGGGTTACTGAGGAAATAATTT
TTAGTAACATACTATTGTGCTCTTTCCTATAATTTCATATTTGTGTCAGC
GTTTGTTTGACTACAAGATTACTGCTTAGGATACCTTTGTGTGAGCTGTG
AATCCTATCAAATCCTGATAAAAATATATAACGCCTGAGGTCAGTATTCT
TGAAAAGAAGAAAAAGGAAAAAAAGGAACATTTAATGATTGAGTTGAATG
TCCTCATTTGTTATTATCTATGTAGATCGTTATTCGTTATAAGTCGTCAT
GGGACCTAATCGATTTAAACGAGAGAAAAGAGAATCCACTCCCTTTAATG
ATGAGCCCATTGTTCGAGAGGAAGTTCCTCCTGAGTGGAGGGATATAGAA
GCACCCATCAATTTTACCTGGGTGGCACAAGATGAACTTGCTGGAATGGG
ATGGCCCAAGTCTAGAGATCAAGTCCGTTTTTGTGTGGAACAAGGAATTG
ATCATCTAATTTCTCTTTCTCCTGAAAAACTTCCTCCTTCCTATGCCTTT
CCAAATTTAAAATGGACACTCATTCCTGTAGAAGATTTTACAGGACCAAC
CATTGCAGATATAAAGAAATTTATTACCATAATGGATGAAGCACGGAAAG
AAGGAGAGGTATTTATTCTTGTTCATTCTATAATAGGAGGTGTAGATGAG
TGTAGATATGTTTATTTTACAAAGGCCATTGGAGTCCATTGTGCAGAAGG
AAGAGGAAGAACGGGAGTCCTGTGCGCCTGTTACTTGATTTACTATCATG
AGATGAAGCCATGGGATGCCATACGTATTATGAGAAGGCAGCGCCCAGGA
TCCGTCGAAAGGAAAACGCAAGAAGAGACCGTGGTTCGTTTTTGGACGCT
TATCCAAGACTACGGGAAATCCAAATTGGAAGAGTTAGAAGAAAGGGACA
AGGAATTGCGGAGAAAACAAAAGCTCATGAGTTTGAATAATAGCTTGACT
ACTTGTACGACCGAAAACCCCTTATTGGGCCACACAGCAAAGTTCTTTGG
TCCAAATAGCGACGCTCGATCCGAGCGACGATGTCAAAGAGCTAAATCAA
TGCCCAAATTTAATCAAGAAGAGGTAAGAATTATTAGACTCTTTAAGGAA
TCAATATATATGTATATTTATGATACTCATTTCTAATCAAATCTCTGATG
AATTAATATACAAAATCAATATATCTTTAATACTCGTATATACATTGCAA
TGGAAAAATACTCAAACGTCGTAATTTTAATCGAGTTATTGCCTTTCTAA
AAAAGGAAACAAGTTGTCCAACGCGACTACTACGTGTATGTACTCGTACA
TACAAGTCTAAAAAAGATAGATCGAAAGATATGTAAAATAAATGTTACGG
TATCAATTAAAAAGTTGGAAGGTTTCCCAGCTTCTTATGAACCCGCCCAT
AGTGTCCAAGCAAAGGACAAGCGGAACAATTTTTATTATAAATGTAGTAA
AATGACTTTTTATTCCATAATGATGATACATTTATACGAATAATATCTGT
TATATGCTAGTTAATTATGTCATGAGATTCTGAAACCTATTTTTACGTTG
CTATTGCAGGAAGAAGAAGTTAATTTTCGCCAGCATATGCAGAGTTTCTT
TCAATCGCGTCAACACCGTTCTCATCGTCACGAAAGACGATCCCGCTCTC
AACCACACGGAAAAAGATCCGAAAAGAACCAAAATTCAAATCGAAATGAG
CGTGCGACGACACCTGGTCGATCCTTGGTGGAGAATCTCAAACCTGTTCA
TCAACGAACACGAAAACTGATCGAAGAGCCGGCATCAAATCAAAATTCAA
ATGACTTAACCAAACATTTTAAAGACTTTATGAACTCAAGCTCCTCCATC
AATAAGCAAAAGGCTCGGAAACCTCCGAGACACCCCAACAAATCAGTTAG
AGGGGTAGACGAGAATGATGCGAATATTGATAATATTTGTATCCAAGAAA
AACCTATGAGATCTCAATCCTCTTCAAAAGAGAGAAAATATATTAGAGGC
ATGACAGAAACGGAGACAAACACACACAGGAGTGAGAAAGAAACTTCTTG
TCCTCCCTCTAGATCCTCCTCTAGATCTGAGTCCCCCTCAATGTCTGAGG
ATTCTTGTTCATCAGATTCATGTTCCAATTCAAGCTCAAGGTGCTCTTCA
AGAAGAAACTCAACTTGCTCATCCATCCAAGGCTCTTCATCTCGTTCATC
CTCACCCTATACGTCAAGCTCTTCTTCAAGTGAATTCTCAAGTTCCAAGA
AAGTGCCAAACAGTCCTCCTTCATTTAAACCTACCTATACCGTAGAGAAC
ATTTCCTCCACCACCTACGACTACTACACGAGGATTCGCTCACGTGCTGC
AGCTAATCGAACGGAAAGCAAAAAACCAATGGAATGTTATCCCTCTATAA
CCAATATACCGTCCCAAAGCACCACTTCCGACTCCAGATTCAGGAGGGCT
CAAACAGAGTTGTCTGATAGACCTTACACTAGTGCTTACAGTACTCGAAA
CTATTCAAGTGTCTTAAACAATTACGATATTGATCAAAAATATCTGAGTA
ACAGAAACATTAATAGCAATAGCCCATACAACTCCTCTTCATCTCGTTCA
ATTACTGCAAATTCAATCGTTGTTGATCGAGCTTTATCCAGTCTACGATG
TGGGAATAGTTCAAATATACTTAATCGTAGATTCAGAACAGACAAAACAT
TAGAATATCCTACTCCACTTGTTCGAGATTCATGGAAAAGAACCAATCAA
CGGTTTAATTACTCCAGATTTGTGTCTACCTCTCCAGAAACCTTTGTTTA
AAACACTATTTATAGTATAAATCTGCCTACTCCATTTGTCTTTTCATATA
TTAACAAATCATTAGTATTTTGCCAACTATGTTTTTTTGACTCTTTGTGT
TTTTTTAACAATAAATTATTCCATTTTGATATTATAAAGAGAAAAA
back to top
Add to Basket