EMLSAT00000008228, EMLSAT00000008228-704075 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008228
Unique NameEMLSAT00000008228-704075
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s496supercontigLSalAtl2s496:349997..351002 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008228 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008228EMLSAG00000008228-690994Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000036493EMLSAE00000036493-745421Lepeophtheirus salmonisexon
EMLSAE00000036494EMLSAE00000036494-745422Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776715auto776715Lepeophtheirus salmonispolypeptide
EMLSAP00000008228EMLSAP00000008228Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008228

>EMLSAP00000008228 ID=EMLSAP00000008228|Name=EMLSAP00000008228|organism=Lepeophtheirus salmonis|type=polypeptide|length=288bp
MGEVKSSWASEIEIEEDDAPSETIDGNTKVVTDFFVNEDEKKVKWIRTYK
IEKKIVXKAIARRKGLAKFGDCLKDRPGPDPATTQLHEEXTMQYISSKEE
NEKDSNDTELDKLKKMNKGMIKCRICKEDHWTTNCPYKDTLGPLRESLSA
GKEDEDPEKSESPTPAPNAGSSAASSRAYVPPSRREGARDRIIGDSMSDR
RRNEDNAAIRVSNLSENTQESDVQELFKPFGAIARIFLAKDKQTGQXKGF
AFIHYYKKEEAXKAIATLNGYGYDYLILSVEWAKPTGT
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mRNA from alignment at LSalAtl2s496:349997..351002-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008228-704075 ID=EMLSAT00000008228-704075|Name=EMLSAT00000008228|organism=Lepeophtheirus salmonis|type=mRNA|length=1006bp|location=Sequence derived from alignment at LSalAtl2s496:349997..351002- (Lepeophtheirus salmonis)
ATGGGGGAAGTGAAATCATCTTGGGCCAGTGAGATTGAGATTGAGGAGGA
CGATGCCCCTTCTGAGACCATCGATGGTAATACCAAGGTCGTGACGGACT
TCTTCGTAAACGAGGACGAGAAGAAGGTGAGAGCTGAGGGTTCTAAGGGA
AGGGTTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAATTTGTGACTCG
TGTGTGTTTCTGCAGGTGAAATGGATCCGAACCTACAAGATTGAGAAGAA
GATTGTGKCCAAGGCCATAGCGCGAAGGAAGGGTCTTGCCAAGTTTGGAG
ATTGTTTAAAGGACCGTCCGGGTCCGGACCCGGCCACGACCCAACTGCAC
GAAGAGGKGACGATGCAATACATTTCCTCCAAGGAAGAGAACGAAAAGGA
CTCGAACGACACGGAGTTGGACAAACTCAAGAAAATGAACAAGGGAATGA
TCAAATGTCGTATCTGCAAAGAGGACCATTGGACCACCAACTGTCCCTAC
AAGGACACTCTGGGTCCCCTCAGAGAATCCCTCTCCGCTGGAAAGGAGGA
TGAAGACCCCGAAAAGTCGGAATCCCCAACACCTGCTCCTAATGCTGGGT
CTTCAGCAGCTAGTAGCAGAGCCTATGTTCCACCAAGTCGTCGCGAAGGT
GCTCGAGATAGGATCATTGGGGATTCCATGTCTGATCGTCGTAGAAACGA
AGATAACGCCGCCATTCGTGTTTCCAATCTTAGCGAAAATACACAAGAAA
GTGACGTTCAAGAATTGTTCAAGCCCTTCGGAGCTATTGCACGTATCTTT
TTGGCTAAGGATAAGCAAACAGGTCAATRTAAAGGGTTTGCCTTCATTCA
TTATTATAAGAAGGAAGAGGCTGNTAAAGCCATTGCGACTCTTAATGGAT
ATGGCTATGACTATCTCATTCTTAGTGTTGAGTGGGCTAAGCCCACTGGC
ACATAA
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