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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s5089 | supercontig | LSalAtl2s5089:517..5671 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000008328 >EMLSAP00000008328 ID=EMLSAP00000008328|Name=EMLSAP00000008328|organism=Lepeophtheirus salmonis|type=polypeptide|length=160bp
MNGKEMITNMSKLGCNVIVDQGNRKKVWQMKRKERITEQTYQMSRWTPMV
KDIMEDCIEDKLDNSHFPFLGGQRTGSQFKQAPTSVRYGQWHKDKAKETS
QKNVPRLIVFIVGGATYSEFRCAYEVTKEKKTWEVIIGGSHISTPSHFLD
DIKNLGADDE back to topmRNA from alignment at LSalAtl2s5089:517..5671+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000008328-704175 ID=EMLSAT00000008328-704175|Name=EMLSAT00000008328|organism=Lepeophtheirus salmonis|type=mRNA|length=5155bp|location=Sequence derived from alignment at LSalAtl2s5089:517..5671+ (Lepeophtheirus salmonis)
ATTCCGATTAATCGTCCCATCAAAAACTTATAAAACTTTTGCTCCAGCCC
CTCGATATAAAGTCATTGATCCTCACATCACTTATTCATCCTTCATTTCC
CNGACTACATTCATAGGTATGAAGCCTCTGAGGGAGTAAAKAATCTTTTG
GATGAGAATGATGATTTATGGGTAGATATGCGACATAAACACATCGCAGT
TGTGTCTCAAGAAGTGACGAATCAGCTTAAAAAGTTTAATCAAGAAAAAA
GAATCAATAGCTCTGACTCAAAGAACATGAGAGACTTGTCACAAATGATT
AAGAAGATGCCTCAACATCAAAAAGAGCTGGCAATGTTCTCAACTCATCT
TCACCTAGCTGAAGAAAATATGAAGTCCTATAGGGTATTCTAAACTACTC
AAACTGATTAAGGGGACTTTTACTCATCATTTTTTAAAATCCTTTTTAGG
GGTACGTGGATAAACTTTGTAAAGTGGAGCAGGATTTNGGCAATGGGTAA
TAATATAATAGAACAACTTATTTTGATGTTAATTTAATTTGTCAAATCCT
AGGTACGGATGCCGAAGGAGAAAGGATTCGTGATCACATGAGAAGCATTG
TTCCAATTCTTTTGGATCAAAATGTGGATAACAAAGATAAGATCCGCATT
ATTCTTCTCTACATTCAATAAAAAAATGGTATCTCTGAGGAAAATTTCAC
TAAACTAATTCAGCATGCTCAGATTCCAATGAATGGAAAAGAAATGATTA
CTAATATGTCCAAACTGGGTTGTAATGTTATTGTAGATGTGAGTATTTTT
TATTTNCATTATAAGTAATGATAAATAAATATAAAAATATTTTATATTTA
TTTAGCAAGGAAATCGCAAAAAGGTTTGGCAAATGAAGAGAAAGGAAAGG
ATCACAGAGCAAACATATCAAATGTCTCGTTGGACACCCATGGTGAAGGA
TATCATGGAGGATTGTATAGAGGACAAATTAGACAACTCTCATTTCCCAT
TCCTTGGAGGCCAAAGAACGGGTTCACAATTCAAACAAGCTCCAACAAGG
TAACACTACGTCCCTTCGTTGTCCAATCAATCCACATACTGCTAGTGTTG
GAACGGTCCTAGAACTGATTTCCTAATCAGTCTCCCCCACCCCTTTAAAT
ATTTTCCTAATACAGGGGCGTCTGCAGGATCCCTTATAATCTCGTCTKTT
TGAAAGAGGTTATTAATTGTCAAGTATGATAAACCTTCAACAGTAACTGC
GTCATTTCAGATTTTATAGTTTCCATAAAAGACTAATAAGTACCGGTCCT
AGGACTGACAAAATTAATCAGGACCAGACTGGTAGGACTACAGTTTATGT
AGACCGATTCAACTCTACCACTACATATTATGTAATATTTAATTATCATT
ACTTCTGAATGTCTCTCACGCAACTACTCCTAATCTGTATTGGTGAAGGG
TTGCCTTGCACACTTTTTTTATATAAAAAATTTGAATTCGTTTTATAGGG
CCTCAACGCACGAAAAAATCCGCATTTTCTTTTACAAAAGTTTCTTCAGA
AGTTAAAAGGTTTTGGGTGCTTTTGATGCCGTTTAATCATTATCATAACT
AAATGAATATACAAAAATTCAACTAACCCATTTAATAATTATTGAGTGCA
TCTTTCTTTCATGTCAATAATAATTAATGTTTGCAAAATATATATATTTT
TTAAAATAATTACTAATAGCCATAAAAATGTATAAATATATTAAACCAGT
TAGATGGGCAATTAATCACTTAATGCTGTTTGCATTTAATTTTCTTTAAT
GAAGCAASATAATGTTTTATACTCTTTGTATGTCTTCTTTCTAACCCAAT
GGTTACTTCATGTTTCAATTAACTCTTTTATCGTGTATATAATATTATAG
GGGATATGTACATTATAATTAATAACCGCTTGAGTGCCACTATCTTTGTA
GTCATGGAGTTGAACCCYAGWTATTAMTYAGMCATTCCATTTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTGTTTTTGTTAATTCCCCATTTACCAAAT
AGGGCCGGTTCACATTAAGATCCGAAAACTAATTTAGGTAATATTTGGAG
AAGTATTGGTAGAGGAAAAATAAATACTGCGATGTGTGATCATTTTTTGA
TGTAGAATTAAAAAACAAATTCCTTCATTTGAATGCCCATAAATGAAGGC
ATTAGCTTCAAAAATTACTATTTCTGTTTCATTGAACGCATCCTCCTCTG
GGTGTTTATATCTCAAAACACCAGTATAACATGATCACACATGGCAGTTT
TTAATTGTTTGTTATTCTACCATTACTTTTCCAGATATTATCTATTATGA
GTTTTCGGATTCTTATGTGAACTGTTTGATATATGGGAAATGGGGCCTTA
AAGAAAACATCAATAACTGGGAAACACCTTATCGAAATGACCTCAAATTT
TGGCAGGGGATTTATTATAAGAGGTGAAACATATCTAAAAAGGTAGAAAA
TCTAAAGACCTTGCTGTAAATTTTGAAAAAAAATTGGCTCATTTTACATG
GAATGACCGTATTTTTTTACTAATGCTCCATGAATTGCTTAAATCTTTTT
TATCTTTTTATATACACCGCTATTCTTATTAATTATCACTTTATCKCATT
AGTGTTCGGTATGGCCAATGGCACAAGGATAAGGCGAAGGAGACGAGCCA
GAAAAATGTTCCTAGACTCATAGTTTTTATTGTTGGTGGAGCTACTTATT
CGGAATTCAGGTGCGCCTATGAAGTTACAAAGGAAAAGAAGACCTGGGAA
GTCATTATAGGTGAGAAAGGAGTTTAATCAGGCTTGCACCATGGATAATA
ACAACTGGGCTAAAAAGTCCGGGGCTTAATAAAGAAAAGTATTGTTGTGT
CGATTCTTATTTATTCAGTTCAGTCCTATCTTAGGATTGGTCCTTTCTGA
ACTGTCGGTCYTTGGAATGTTTCATAAGAGTGTTGTTGGTTTATTAAGAC
AAATAAGATATATGGAATATGTATTAAGATTATTGCACTTATCTTGCTTA
AATATTATTTCTTTCATTCTAATACAATTTAATAAGAACATTTTATATTG
CTTCTTTGTTACATTTATTTATTCAATTATATAACGGAATAATTAATAAA
TTGACGTCACGAGGGACTGATTTTACCTTCTATTAGGACCGAAAAATGGG
ACTGCATTGAATGGGGCCGGACTGGACTGTAGTCCTTGTTCCTAAATAAG
AACCGACACATCACTAAAAACATATTTTTTTTCTGTTCAAAATAGCCTTT
TTTTTTTAATTATAATTTTTTTTATTTGCTTTATGGATCGAGTCCTAAAA
GACTTTTGAAGCCATTTTTTTAGCTGGAATGGTATTTTTTCACATCAAAC
ACCAGTGTAAAATTAAAATACGAAATTGTTTTAGAAATAGCAACAAAAGT
AGGGTATCACTTAGCACAATAACTCACACACTAGACAATTGATTCTCATT
AAATTTTGACAGCTGTCTTTTGAAGGTTGTTACTAACTGAAAAGGAGGTT
TTAAAAAAAGCGCCATCTTTGTGATAAGCCTCTGGATTTTCATTTGTCAT
AAGTATTTTGTTGCATGACTCAATAGCTATCAAATGATCTATTACATGCA
TCTATCGGATAAGTGGTTTACGAACTACAATCCAAAACACAAAAGGTATT
CAATAACTTTTTGATCAAATTCATAATGAAAAGGAGCTCAGAAATCAGAG
ATGGAATTAATTATAGATCTATGGTTTCATTTTTAAGTTATCCTGGGAGA
ACGTGAACTAACGCAACACCAGCGCTATAAAGCAATCTATACTTATTTAA
GGCCTCCCTTTCATTTTTTTAAATGAAACGACAACCATCTGTTCAATTTT
TGTCCAAATTTAGTTGTCTAAGAAAAATGCTTTTATGCGCTAGATASCCA
TTTTGATAGTGTTTTGTCAGTTCAGTCTTAAGACTGGTCCTATCAATCCT
TGGAAACTGTCCTTAAAAATGTCGGTTTTTTAGACTATCAGAACTAATTA
AAAAAGAAAGAAATAAAGTTGAGTGACGTCATCAAGTAYCGAACTTTATC
AGCTTTAGGATTGATRTGTTGAACTGGACGGGACTGCAGTCTTCAGTCCT
AAATAAGAACTAACGCAGTACTACATTTTGAGGTACCACAACAAAGGTGA
CGGACGTCACTTAATCATTTCATGCATGCTAATTTTTCATCATTGGGTGA
ATTTATGGAGGTTGCGTAGTTAATTAGTAATTGAGGATGCCCTCAGCATC
TCCTAGCGGGCAAAAGAGTATTGTTTTAGGCAATTAAATCCAAATTTGAA
ATTGATTATGATCGTTTTGCTATTTGGCTTTGGTCTTGGGGTAAAAGAGA
TTTGTTTGTAGAACAATGAATGACACGAATTTTCTGCCAAGTGGTCCAAG
CCTGAACATAATTAAAGTTAAAGTTAGAATACGAAACTTATTGATATAAT
CCATTTTCTATTTTATTCTAGGTGGCTCACATATTTCCACTCCATCTCAT
TTTTTGGATGACATTAAGAACCTGGGTGCGGATGATGAATAAGCCCTTTC
ATCATCTCCCTTTCAAAAAACAACCGAAGAATATATAAAGAAAAATAAGA
AGAAAACATTATAATTGATGATACACTCTTTAAGACCACAGAATGAAAAT
TTATAAATAAGAGTGTTTTTTTAGGACGAAAATGAATTCGATTTTTTTAT
GGAGATTTACGGCATAGTTGACACTACTAGGATGGTTAAAAGAAAATCCA
TCCCACTGCAACTTACAATTCCCTCTCCCCACATTTGAGAAATTATCTTC
TTTTTGAAGAGCTTTCAGTGAGACGGATTTGTTTCATGATTCATTTCATT
TATAGTAGATGTATTCATTATATATCATTTCCATTACTGCATCATCTGCG
TCATTATCTTTSTTCTTGTTTATTTCATTTTAAATTATAGTGCATCTCAC
TGCATGTATTTTTTGGGGTGAGCAAGTGAGGGCTCCTTTAGGACTGAGCT
GAAGTGCATTATAAATATTATTTTATGAAAGTTTGTAGCATAGTAGAAGC
ATTTATCCAATAATAATAATTCAAAGTGTCCTAAATACATAATATAATAT
AAACT back to top
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