EMLSAT00000008482, EMLSAT00000008482-704329 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008482
Unique NameEMLSAT00000008482-704329
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s51supercontigLSalAtl2s51:922487..923252 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008482 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008482EMLSAG00000008482-691248Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000037694EMLSAE00000037694-746622Lepeophtheirus salmonisexon
EMLSAE00000037695EMLSAE00000037695-746623Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780080auto780080Lepeophtheirus salmonispolypeptide
EMLSAP00000008482EMLSAP00000008482Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008482

>EMLSAP00000008482 ID=EMLSAP00000008482|Name=EMLSAP00000008482|organism=Lepeophtheirus salmonis|type=polypeptide|length=229bp
MYNGEVRIKPHELDQFLSIAQELKVNGLMQDQSTNGVNKFETTAPKRSIS
TTDDLSLHEVKRESSPPLHLQNKRIALSTTEEDEDSEIEDITPMGNSTMM
GEPSNLEYQETDNDQGAYESSFQPEFQEEDSNFKKESEDGTIKANELLDA
KIFELVSPKDPNGKYKCRKCSYSSSIKRDIKNHVEARHFVTNGFACDKCG
GRYKTRHSLAMHKRSTHKKDMEFFNTDDL
back to top

mRNA from alignment at LSalAtl2s51:922487..923252-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008482-704329 ID=EMLSAT00000008482-704329|Name=EMLSAT00000008482|organism=Lepeophtheirus salmonis|type=mRNA|length=766bp|location=Sequence derived from alignment at LSalAtl2s51:922487..923252- (Lepeophtheirus salmonis)
ATGTACAATGGAGAAGTACGCATCAAACCCCATGAATTGGATCAATTCTT
ATCCATTGCTCAAGAGCTTAAAGTCAATGGGCTCATGCAGGATCAATCCA
CTAATGGAGTGAACAAGTTTGAGACCACGGCGCCGAAAAGATCCATCTCT
ACTACGGATGATCTTTCCCTCCACGAAGTGAAAAGGGAATCATCTCCGCC
CCTTCATTTGCAAAACAAAAGGATTGCTCTGAGTACAACAGAGGAAGATG
AGGATTCCGAAATAGAGGATATTACTCCTATGGGAAATAGTACAATGATG
GGAGAACCTTCCAATTTAGAGTATCAAGAGACTGACAATGATCAAGGAGC
ATATGAATCTTCCTTTCAACCTGAATTTCAAGAGGAGGATTCTAATTTCA
AAAAAGAATCTGAAGATGGGACAATTAAAGCTAATGGTATATCAATTATT
CATAAGAGGAAGTAACAGAATAATTTATTTTCATGCTCCCTAAATGATGT
TATTAATTTCAGAATTGTTGGATGCAAAAATTTTTGAACTTGTTTCTCCT
AAGGACCCGAATGGTAAATATAAATGCCGTAAATGCTCTTACAGCTCATC
AATCAAACGTGACATAAAAAATCATGTTGAAGCTAGACATTTTGTAACAA
ATGGGTTTGCTTGTGATAAATGTGGAGGCAGATACAAAACAAGGCACTCT
TTAGCCATGCATAAAAGGAGTACTCACAAAAAGGATATGGAATTCTTCAA
TACAGATGATTTATAA
back to top
Add to Basket