EMLSAT00000008770, EMLSAT00000008770-704617 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008770
Unique NameEMLSAT00000008770-704617
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s543supercontigLSalAtl2s543:274592..275849 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008770 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008770EMLSAG00000008770-691536Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039028EMLSAE00000039028-747956Lepeophtheirus salmonisexon
EMLSAE00000039029EMLSAE00000039029-747957Lepeophtheirus salmonisexon
EMLSAE00000039030EMLSAE00000039030-747958Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775676auto775676Lepeophtheirus salmonispolypeptide
EMLSAP00000008770EMLSAP00000008770Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008770

>EMLSAP00000008770 ID=EMLSAP00000008770|Name=EMLSAP00000008770|organism=Lepeophtheirus salmonis|type=polypeptide|length=302bp
MGSLERLCLRWNEYESNFKQGFSDLRENEELFDVTLISGSKIIKAHKVIL
SACSPIFRSIIASAPIQTHPLIYLRGINFDHLELLLSFMYHGEVKVIQEE
LDDFISIAEEFQIKGLSNDPPPPKKRRESQPSTSTASAYPTQSYSSHDSP
DLSIVKNDINDSLSKSLSNTEDEECYILDEGNDSEFTQNYSQNESEHMET
NNDVLDISSVKNKEYFQALNNEIDRYYCKNTLQRNFQCKKCNYSTVDRCT
MRSHVEAKHIITDGFVCSTCGKTYKTRNSLKVHNHQVHKNESVVFKGPKA
SL
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mRNA from alignment at LSalAtl2s543:274592..275849+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008770-704617 ID=EMLSAT00000008770-704617|Name=EMLSAT00000008770|organism=Lepeophtheirus salmonis|type=mRNA|length=1258bp|location=Sequence derived from alignment at LSalAtl2s543:274592..275849+ (Lepeophtheirus salmonis)
TAAAGATATGTGACAATGACGTCATCCTGTGGTGCAATATATATATATAA
GCAAAGTATTTATAAGCGTACTTTTGTTTTGTAATTATTTATTAAAATAT
TATAGCAAGCTAAAATCAAGAATGGGATCCCTAGAACGCCTTTGTCTTCG
ATGGAATGAGTATGAATCCAATTTCAAACAAGGTTTTTCCGATCTCCGTG
AAAACGAGGAACTCTTTGATGTGACGCTCATTTCTGGCTCAAAGATCATC
AAGGCTCATAAAGTGATTCTGAGTGCTTGCTCCCCTATTTTTCGTTCTAT
TATTGCATCTGCACCCATCCAGACACATCCACTGATTTATTTGAGAGGGA
TCAACTTTGATCATTTGGAATTACTCCTTTCCTTCATGTATCATGGAGAA
GTGAAAGTGATTCAAGAGGAACTCGATGATTTTATTTCCATTGCAGAAGA
GTTTCAAATCAAGGGTCTCTCCAATGATCCTCCTCCTCCTAAAAAAAGAC
GTGAATCTCAGCCTTCCACCTCTACTGCTTCCGCTTATCCCACTCAATCT
TATTCATCTCATGACTCCCCCGATCTTTCCATTGTAAAGAATGATATAAA
CGATTCCCTCTCCAAATCTTTATCTAATACCGAAGATGAAGAATGTTATA
TCCTTGATGAGGGCAATGACTCAGAATTTACTCAAAATTATAGTCAAAAC
GAATCTGAGCATATGGAAACTAATAATGATGTCTTAGATATTTCGTCGGT
TAAAAACAAGGGTTCGTACCAATATTAGTAGTTCAAACATTATTTAATAT
ATTATATAATTTTTAATTTCAGAGTATTTTCAAGCGTTAAATAATGAGAT
CGATCGGTACTATTGTAAGAATACATTGCAACGAAATTTCCAATGTAAAA
AATGTAACTACTCTACAGTGGATAGATGTACAATGCGTAGTCATGTTGAA
GCTAAACACATAATTACAGACGGTTTTGTTTGCTCTACCTGCGGTAAAAC
TTATAAAACTAGAAATTCTCTCAAAGTTCATAATCATCAAGTCCATAAAA
ATGAAAGTGTTGTCTTTAAAGGTCCAAAGGCTAGTTTATGAAGCAGATTC
TCAATTCAAATCTATTCTAAATTAAGGCATTTAATCTAGAAACTTATTAA
TTAAAAAACTATTGTTTTCTTGATTCATAACTCATATATACATATTTTAC
ACATATAATGTGTTTTCACTCACTAATATTTTCGCAAATTTCATTTCCTT
ATATTGAT
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