EMLSAT00000008891, EMLSAT00000008891-704738 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008891
Unique NameEMLSAT00000008891-704738
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s554supercontigLSalAtl2s554:379767..382888 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008891 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008891EMLSAG00000008891-691657Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039514EMLSAE00000039514-748442Lepeophtheirus salmonisexon
EMLSAE00000039515EMLSAE00000039515-748443Lepeophtheirus salmonisexon
EMLSAE00000039516EMLSAE00000039516-748444Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777071auto777071Lepeophtheirus salmonispolypeptide
EMLSAP00000008891EMLSAP00000008891Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008891

>EMLSAP00000008891 ID=EMLSAP00000008891|Name=EMLSAP00000008891|organism=Lepeophtheirus salmonis|type=polypeptide|length=317bp
MMGSPELSAQQAYDNFWPKAMEEIHNMEVTGLKHQELPLARIKKIMKLDD
DVKMISAEAPVLFAKAAEMFIHELTXRAWIHTEDNKRRTLQRNDIAMAIT
KYDQFDFLIDIVPREEVKAPSTGKSSREDNSVRVVPEQVSYYFQLSQQGD
AAVGSPNANSHPQRNSSQQQQASNQSQQRVVVSSTSGSIQTLTTTSAPTS
VGQAAAAAAXAAQVIHLQPTQMVSTPIPPPGGIQIVQQIVGPNGEIQQIP
IQLTSQQLGLIRAQMTGPSQTPLVIQTAPIXPATLQTSHPQTVSAGPQTI
QLSNTGQVQQVYTLSQE
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mRNA from alignment at LSalAtl2s554:379767..382888+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008891-704738 ID=EMLSAT00000008891-704738|Name=EMLSAT00000008891|organism=Lepeophtheirus salmonis|type=mRNA|length=3122bp|location=Sequence derived from alignment at LSalAtl2s554:379767..382888+ (Lepeophtheirus salmonis)
CTCTATTTATTATATGCTAGAATCAATAATCATCGTAGTGTTATTAATTA
ACACTTTACAATTGCATCAAAATCACAAAATTCCCTGCTAACCTTGCTAA
CGAACGTCTCACGGAGTACCAGAGTTTGAGCGATTTTATTGTTGTCTCAC
CCGGCACGGATTCCAAAGAGGGCTCCGTGTCTTTTTCGAATTTTTGGGAT
AACGAATTCATCAATCGATTCCATTTTTTGAAATCTGGTTCTGAAATTTT
AAAGAACCTATGTACCAAAAAAAATCTTCTAGATAAGTAACCGCGTTTGC
CCAAGAGAGCGCGGTAAATTGGGGCCATAGATAGCTTGCGAACCCTGTAC
TCTCTTTGCTTTTGAATATATTTACCTAGCTATTAGTTTTTCGCTGAGGA
TATATATTTATTTTGAGATAGCTAGCTAATAAATGGCTAGATCTTTTGTT
GTATTATAGTGGTCCCACTGTATTACTACTATGTTAAATCTTTGCAGGGT
TGATTGAGTGTAAATTCAGCTCAGGCGTCGAATTACTGTCTGTAATCTCT
AATTGTGTATTATTGTTATTATTGTCATTTTCATAATTTGACTCTGATTC
ATTTCTGAGTTGTGGTTTGAGTCTCATTCAGACTTAGAAGGAGGAGTTGG
GAAGAGAGGATTCGTAGAAGTATGATGGGATCACCGGAGCTCTCGGCTCA
ACAAGCATATGACAATTTCTGGCCCAAGGCCATGGAAGAAATCCATAACA
TGGAAGTCACGGGTCTCAAGCATCAGGAGCTTCCACTGGCGCGCATTAAA
AAGGTATTTTGTTATCCCTTGGATTTCGAGTTCGACTCTTTCTTGTCTTG
TCTTTTTGGGCGGGAATTTCGTTTTGCCTCAAGAATGAGAGTTTTGTTTT
ACTTTACAGATTATGAAGCTGGATGATGACGTGAAAATGATCTCTGCGGA
GGCTCCTGTTCTCTTTGCAAAGGCTGCAGAAATGTTTATTCACGAATTAA
CCAWGCGCGCCTGGATTCACACTGAGGATAACAAACGAAGAACTCTTCAA
AGAAACGATATTGCCATGGCCATCACTAAGTGAGTCTTCACTCAGGGAGG
ATCATTTATTTCATGCTCTAACCCTTCTTCTTTTTTTCAGATATGATCAG
TTCGACTTCCTTATTGACATTGTTCCGCGAGAGGAAGTGAAGGCTCCTTC
CACGGGCAAATCCTCCCGGGAAGATAACTCTGTTCGCGTCGTACCGGAGC
AAGTCTCTTACTATTTCCAATTATCTCAACAGGGAGATGCCGCGGTCGGG
TCCCCTAATGCTAATAGCCATCCTCAACGTAATTCAAGTCAGCAGCAACA
AGCCTCAAATCAGTCCCAGCAACGTGTGGTCGTTTCTTCTACCTCTGGAA
GTATACAAACTCTTACCACTACATCAGCCCCAACATCTGTTGGACAAGCT
GCTGCAGCAGCRGCTSCCGCCGCTCAAGTGATACAYCTTCAACCCACTCA
AATGGTCAGTACGCCCATTCCACCTCCTGGGGGCATTCAAATTGTACAAC
AAATTGTCGGACCAAATGGAGAGATTCAACAAATACCCATTCAGCTCACG
AGTCAACAATTGGGACTCATTAGAGCACAAATGACTGGTCCCTCTCAGAC
TCCTCTCGTAATCCAAACGGCKCCTATTCAKCCTGCGACTCTTCAAACTT
CGCATCCGCAAACTGTCTCTGCAGGACCTCAGACTATTCAATTAAGCAAT
ACAGGCCAAGTACAACAAGTCTACACTCTATCCCAGGAATGATTAAGAAT
ATAAAAAAATTATATATTTATAAATTATGTCAATAGATATGCTAAATTAA
TTTACTCTATTCCCCTCTCTCCTACCCCCCACATCGATTCTTTCCTATAA
TAATAATAGATATAAATATCATAATGAATTATTTTCTATGNGAAACATTA
GTGTCATAATAAATATGTACTTATACATGAGAAGAAAAAGATAATAATTC
AGTAAATAGTACTAATTTTTAGTATGATTTATTATAAAGCCCATGACGAT
TACGTAGGTGTATCAATGTTATGAATAATGTTAATGATATTTCATCATCA
TTTAATGTTTTTTTGGATTACTTTTTGTAACCGTATAAAAGTCCATCTTA
CAAAGATCTAAAAATCTAAATGAATAAATATGTATATATAATATATATAA
AGCTGCTCCTCCTGAGCATGGAGCAAGAGAGAAATGAGAGATCGAAGTAA
TAAGTAGAAGTGTCCAAGAATTTAATATTGAGGCTAAACATATCAGAGAA
AGGAGAGAAGTAAGTGAAGAAGAAGGGGGAATCCGTGTTATCACGAGTCC
TTAGAGGGCAGAAACGGAAAGGGTTCATCCTCTTCTCCATTTATATTATC
ATATTGATTCAAATCTGGCTCTTGGAACGGAGTCAGGGTAGCATCTCCAT
CCTCTTCCACTTCATCTTCCTCATCAGGCCATTTGGAGGAGGAGAGGGAT
AGGGAGGAAGAGGCTCTAGAGTTGGAGGAACTCCAATCCTTTCTTTTACG
TTTGAGATGATGATTGACTTTATGATCAGGGGGAAGTGGGGTCTCTGTCT
CCGTGTCCAAGGCGTGAACCCGCTTTTTCCAAGCCTTGACGAGTCCATCC
CATTGTCGTCTTGAATATTTGAGATGTTTCTTTGGCGTTACAGGATGATG
CGCTTTTCGTAGGTTCTGAGGAATTTTCTCTATGTATGAATCATACGAGA
GAGTGTTCTTCCCGTACTCGATTTGCTTTTCCCTTCGACTCAAAATCACT
GGATCTGTTTCTTTCTCAAGGGGAGATTTCCGCTCTGGACGAGAACTAGA
GCCGTTCACCTTTGGTCGTTTGTTATCACAGGCTGAACTATCCGCACTCA
TTTTCTCATCCGAGTCTTCTATTTTCATTCTAATTCACTACGAGTGAGAT
ATGGATTCAAGTTCGATTATCCTTAATTTCTCAAATGATACATAGAAAAA
CTAAGCTAACGGTACGTAACAAAGCGTTTCCTTCTCAGTGAGTCGCCAAT
ACACTCAGACAAATCCTACAAACAACTAATCTATTCTAAACAAGAAAAAT
ATTTTCACTGAAAAACCCCGCC
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