EMLSAT00000008937, EMLSAT00000008937-704784 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008937
Unique NameEMLSAT00000008937-704784
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s556supercontigLSalAtl2s556:194619..195346 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008937 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008937EMLSAG00000008937-691703Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039697EMLSAE00000039697-748625Lepeophtheirus salmonisexon
EMLSAE00000039698EMLSAE00000039698-748626Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774269auto774269Lepeophtheirus salmonispolypeptide
EMLSAP00000008937EMLSAP00000008937Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008937

>EMLSAP00000008937 ID=EMLSAP00000008937|Name=EMLSAP00000008937|organism=Lepeophtheirus salmonis|type=polypeptide|length=180bp
MLHNLLFGLALISVVSGAIRSYDGGPPPPPYAYSYDSPPKYNFRWNVNDP
YSGNNFQHNEQRENDVTSGSYSVQLPDGRLQKVTYSVSGEGGYQAEVTYE
GIASNEYYTSESTNPKPIKVIKTIPDSSSSYSQRATISNKPSASSSSFSS
PSSFPQRATISNQPSPTFSSFXSPSSSGSI
back to top

mRNA from alignment at LSalAtl2s556:194619..195346+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008937-704784 ID=EMLSAT00000008937-704784|Name=EMLSAT00000008937|organism=Lepeophtheirus salmonis|type=mRNA|length=728bp|location=Sequence derived from alignment at LSalAtl2s556:194619..195346+ (Lepeophtheirus salmonis)
AAACTATGATCCTATAAATAGACAATCTCTTGTGGTTTTGAACATCAGTG
TTGTTTGATTCTTATTCGTGAATTCGATTATATCTATCCCTCTATCTATA
TATCTAAGGTCCTTAATTTCTCATCATGCTTCACAATGTAAGTTCTTGTT
TTTGAGTCTCCTACTTTTCTAATCCTTAATCAACTCCATGATTTTTCCAG
TTGTTATTTGGATTAGCCCTCATTTCTGTTGTTTCTGGAGCTATTCGCTC
ATACGATGGCGGACCACCCCCACCTCCCTATGCCTACTCCTACGATTCTC
CACCCAAATACAACTTTCGATGGAATGTCAACGACCCCTATTCTGGAAAT
AATTTCCAACATAATGAACAACGAGAAAATGACGTCACATCTGGATCTTA
CTCCGTTCAACTCCCTGATGGACGACTTCAAAAAGTGACTTATTCTGTAA
GTGGAGAAGGGGGCTATCAAGCAGAGGTGACCTATGAAGGAATTGCAAGC
AATGAATACTACACCTCTGAGTCAACGAATCCGAAACCCATCAAAGTGAT
CAAAACCATACCCGATTCCTCTTCCTCCTATTCTCAGAGGGCTACAATTT
CAAATAAGCCCTCTGCTTCTTCATCATCATTCTCAAGTCCATCCTCCTTT
CCTCAGAGGGCTACGATTTCTAATCAACCCTCACCTACTTTTTCATCATT
CRCAAGTCCATCCTCCTCCGGGTCCATT
back to top
Add to Basket