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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s58 | supercontig | LSalAtl2s58:680408..685072 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000009267 >EMLSAP00000009267 ID=EMLSAP00000009267|Name=EMLSAP00000009267|organism=Lepeophtheirus salmonis|type=polypeptide|length=946bp
MSSDNTETKKTRFSVAPSSANLAEQDTEGDPETSNVPDHDKAGGEETNSF
HPTYSTQYFKSFRQYLTRDALPSESHYRNLLSISNHPRKFSRPTLEELQE
EQAENGRLLDKKDMDDVEKNEEEQSKGKVVRFGWIEGVFMRCLLNIWGVM
LFLRLTWVVGQGGLIQGLGVIALGNLVTVITTLSMSAVSTNGQIRGGGIY
YMISRSLGPEFGGAIGIMFTLANSIAVSMYIIGFCQSLLDMCKQYFELEH
LIFSDTTNDVRIIGAISLVAVLALAIVGMEWVTRVQMILLFLLIGSQIDF
VVGSFLPTKEDAAYGFVGYNGTLFVDNLSPTYHDYKDPGNPPSFFSVFGV
FFPAVTGIVAGANLSGDLKDPGVAIPKGTLLAIIVTFITYIGYGTIITGV
MHTEASGNQTEYENWINGVEGALYFNNCSGRPADDFCQYGSSNDQQAMER
ISYTGYLIYAGCFAATLSSAIASLVGAPRVLQALAKDKLYPFIHIFAPGF
GANNDPIRGYFLVFIISMGCILIATESQRLTGVVQLKXQQFVTTLKSIQS
LNDTPEHVKNYRPKVLVFTGLPAHRPPLVDFANLITKKLSLLMCAHVNIG
DAPFKNIELLRNTVQMWFRDHKIKSFYSLTQNKNFEEGAIACMNLAGIGK
MRPNMVLFGYKGDWLEDPKGLDEYISVLHHAFDLHLGVGILRLESGCDFS
KVIGEEEQQQHEIELDEENEDEKNGKQGKSLELQQKKVRXRKVSTAVYTG
IDGNPLPKNTVQDITQFQIKKRKGNIDVWWLYDDGGLTLLLPYILTTRAQ
FAECQLRVFALANRKDELDRETRNMAXLLAKFRIXYXXVTVIPDVTKKAL
DPTKEEFKKILDEIKPPLEESEIISQKEKTNRHLRLTELLREHSKRSEMI
IMTLSIPRRGTAVAQLYMSWLEMMTKNMPPFLLIRGNQSSVLTFYS back to topmRNA from alignment at LSalAtl2s58:680408..685072+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000009267-705114 ID=EMLSAT00000009267-705114|Name=EMLSAT00000009267|organism=Lepeophtheirus salmonis|type=mRNA|length=4665bp|location=Sequence derived from alignment at LSalAtl2s58:680408..685072+ (Lepeophtheirus salmonis)
AATAGATTAAACCTCTTCTAACTAATCAGTTATTATTTGTATATAGATGA
ATCTTTCTTTGGCCATAATTACACTACACCACTCTGTACCTATCTTTATT
TGCTAGCACTACAATATTGCTTATTATTTATTAGGTATATTTTTCATAGG
TTTAACAGTGTCGGCGTGTGTGTTGAGAATGAGTTGTTTTTGGGGTTGGA
TAATGTAGGAGACGGAGCCGCCTGATATTTTTCTTTCAAATTCAGAGTGT
GTGTGGCTATATGTGTAATTTGTTGTATATGATATTGGAAGGTGATCTTC
GGGTTTCTAGTAGTAATATATTTTAAGAGTAGTAGTAGTCTCTCTAGTAC
GTTATTTTCAATTTAAATACATATTATTATTGTAGATGAGAGAAAGAACA
AATACCTTTAATTGGTTAGAAGATGTTGAAGCCGGCCGGGGGGAGGTTGT
TGTAAGAAAAAAGATTCCCTCGTACAACATATTAGTATGTGAAGTAGTAG
ATTTCATGGTTGATACTCAAATCTGTTCATTACAGTTTTTCTCTCAAAGT
GAGAAGGATCCAGGATCGGACTACTCTTGTACTAGATAACTAAATATACA
ATCATTATTTAAGAAATGAGTAGCTAGTGCTGTTGTGATCATTAATTATA
AAGAAGGATTTTCTGTACTTGCCCTCTGTGTGTGTTGACTTGACTTGTGA
TCCGCCTTAACTAAGAACGGTGAAAATGAGTAGTGATAATACGGAAACGA
AAAAGACCCGGTTCTCTGTGGCTCCTTCTTCTGCAAATTTAGCGGAACAA
GATACTGAGGGAGATCCTGAAACAAGCAATGTTCCCGACCATGATAAAGC
TGGAGGTGAAGAAACTAATAGTTTTCATCCAACGTATAGTACCCAATATT
TCAAATCCTTTCGGCAATATTTAACCCGGGATGCTCTTCCCTCGGAGTCT
CATTATAGAAATCTATTATCGATATCTAATCATCCTCGTAAATTTTCGCG
TCCCACTCTTGAGGAGCTACAAGAGGAGCAAGCGGAGAATGGGCGGCTTT
TAGATAAAAAGGATATGGTTAATAATTTTAATCCATCTATATAATATTAA
AGATTTTAGTAGCATGMTTATTTATATCTTTTATAGGATGATGTGGAGAA
AAATGAGGAGGAACAATCCAAGGGTAAAGTGGTCAGATTTGGATGGATTG
AAGGTGTTTTCGTAAGTTAATACTAATAGAAATGGAATGAGATGAATAAT
TACATGTATTTTTTAGATGCGATGTTTGCTCAACATTTGGGGTGTTATGC
TTTTTCTTCGTCTTACTTGGGTTGTAGGCCAAGGGGGATTGAGTAAGATA
TTTTTTTCTTCCATTTTTAACCATTGTATTAATAAAGTCGGTCTTTTCAG
TTCAAGGATTGGGAGTGATTGCCCTTGGAAATCTTGTAACAGTGATCACA
ACATTGTCCATGTCAGCAGTTTCCACAAATGGACAGATACGAGGAGGAGG
GATCTATTATATGATATCTCGCTCCTTAGGACCGGAATTTGGTGGAGCCA
TTGGCATTATGTTTACATTAGCCAACTCTATTGCAGTATCTATGTACATC
ATTGGTTTTTGTCAATCCCTATTGGATATGTGTAAACAATACTTTGAATT
AGAACACCTGATATTCTCGGATACGACAAATGACGTCCGTATTATTGGAG
CAATCTCATTAGTCGCTGTTTTGGCGCTTGCTATCGTTGGAATGGAGTGG
GTGACTCGCGTTCAGATGATTTTATTGTTTCTGTTAATTGGATCACAAAT
TGATTTCGTAGTTGGTTCATTTTTACCAACAAAAGAGGACGCCGCATATG
GGTTTGTTGGGTATAATGGAACGCTGTTTGTAGATAATTTGAGCCCAACT
TATCATGATTACAAGGACCCAGGTAACCCACCATCTTTCTTTTCTGTCTT
CGGTGTTTTTTTCCCTGCTGTAACTGGTATTGTTGCTGGTGCTAATTTAT
CTGGAGATTTAAAAGATCCTGGTGTAGCTATTCCTAAAGGTAAATTATAA
AAGTAATTCAATGATATCCTTTGATGGTTAATTACATTAATTTTAGGCAC
TTTACTTGCCATTATTGTGACTTTTATTACTTATATTGGTTATGGAACGA
TTATTACTGGAGTAATGCATACTGAAGCATCAGGTAATCAAACAGAATAT
GAAAATTGGATTAATGGAGTAGAAGGTGCTCTCTATTTCAATAACTGCTC
TGGTAGACCGGCTGATGATTTTTGTCAATATGGTTCATCAAATGATCAAC
AAGCTATGGAGAGAATATCATACACTGGCTACTTGATTTATGCCGGTTGT
TTTGCTGCAACTTTATCTTCAGCCATTGCATCTCTTGTTGGAGCACCCAG
AGTACTTCAAGCCTTAGCCAAAGACAAACTTTATCCCTTCATTCATATTT
TTGCTCCTGGTTTTGGTGCTAATAACGATCCTATTAGAGGGTATTTTCTT
GTCTTCATCATTTCTATGGGTTGCATCCTAATTGGTAAGCTCAATACTTT
TGATGCATCTAAACATAAACTGATATTATCATTAATTGTTCATATTAATC
TAGCTGAACTCGACGCCGTTTCAACTTTGTTGTCAAACTTTTTCGTAGCA
GCTTATGCTCTAATCAACTTTTCTGTCTTCCACGCTTCTATAACAAAGTC
TCCAGGATGGAGACCCTCTTTTAAATATTATAACCAATGGGTTTCTCTTT
TTGGAACCTTCTTATGTTTTGTCGTTATGTTCTTAATGGACTGGAAAACT
GCCCTTGTGACATTCATGGTAATTATTGCCCTTTACCTCTATATTAGCTA
CCGAAAGCCAGAGGCTAACTGGGGTAGTTCAACTCAAGNCTCAACAATTT
GTCACAACTCTAAAAAGCATTCAATCCCTCAACGATACTCCAGAACACGT
TAAAAATTACAGACCTAAAGTCCTAGTGTTTACAGGTCTTCCTGCTCATA
GGCCTCCACTTGTAGATTTTGCCAATCTTATAACCAAAAAATTATCTCTC
CTAATGTGTGCTCATGTTAATATTGTGAGTTCATGTAGTTTTTAGGACTA
GATTGTTTTAGTAATACACATCTCTTTTAAATATTTTTTAGGGTGATGCA
CCATTTAAGAATATAGAACTTTTGAGGAACACGGTTCAAATGTGGTTTAG
AGACCATAAAATAAAATCATTTTATTCTCTTACTCAAAATAAAAATTTTG
AAGAAGGTGCAATTGCTTGTATGAACCTTGCAGGGATTGGAAAAATGAGA
CCAAATATGGTACTTTTTGGCTACAAGGGGGATTGGTTAGAGGATCCAAA
GGGATTAGATGAATACATTTCTGTTCTTCATCATGCTTTCGATTTACATC
TTGGAGTAGGGATTTTACGTCTTGAATCGGGTTGTGATTTTTCGAAAGTT
ATTGGGGAGGAGGAGCAACAGCAACATGAAATCGAGTTGGATGAAGAAAA
TGAAGATGAGAAGAATGGTAAACAAGGAAAATCTTTAGAACTCCAACAAA
AGAAAGTACGTMCTCGCAAAGTATCCACTGCTGTATATACAGGCATCGAT
GGGAATCCTCTCCCCAAAAATACTGTTCAGGACATCACTCAGTTTCAGGT
TTGTTAAAGATACACTTTTAAGAGTTATAATAGAATAAAATCATTTTATC
AATATATTATATACCTATATAGATTAAGAAAAGAAAAGGTAATATCGATG
TTTGGTGGCTCTATGATGACGGTGGCCTCACTCTCCTCTTACCTTATATT
TTAACGACACGGGCTCAATTTGCAGAGTGTCAGCTAAGAGTTTTCGCCTT
AGCTAATAGAAAAGACGAACTTGACCGCGAAACAAGGAAGTAAGTTATAA
CTATAAAATCTTATCAAATGATAATCTATGGATTATTTCAGTATGGCAGS
TCTATTAGCGAAATTCCGAATTGAMTATTYTKATGTAACAGTCATCCCTG
ATGTCACAAAAAAAGCCTTAGATCCTACGAAGGAAGAGTTCAAGAAAATT
TTGGATGAAATAAAACCACCTCTAGAAGAATCAGAGATAATCAGTCAAAA
GGAAAAAACGAATAGGCACTTGAGGCTCACAGAATTACTAAGAGAACATT
CTAAAAGATCCGAAATGATTATAATGTAAGTTATTCTTACATTTATTCAT
TATTGAGTAATTCATTATTCCCTATTTTCAGGACTTTGTCAATTCCTAGA
CGTGGGACAGCTGTTGCCCAACTATATATGAGTTGGTTGGAAATGATGAC
CAAGAACATGCCTCCTTTCTTATTGATTCGTGGAAATCAATCCTCCGTTT
TAACATTTTATTCTTAATCTCTATATTTTCGTGGAGTAGAGATCTATTTC
AGTTTATTTATTTATGCTCTGTTTTAATTATTTACTTTGTTACAACATAA
TGGTTTCTTATTCAAGTTAGAAAAGTTCCAGAGTTCATTGTAGTTCCGTC
ATTTCAGAATGATATGTTTTTTTTTTTTTGTTTGTTCATTTCATACGTAA
ATTATATGTAGGTTCTTCTGAGTATTTGTTACAATTAACTTACAGATAAT
TAATTAATTTACTCAATAAATTATTTGAAGATCCTAAAAAACAAATGAAT
AAAAGTTAACTCACG back to top
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