EMLSAT00000009545, EMLSAT00000009545-705392 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009545
Unique NameEMLSAT00000009545-705392
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s614supercontigLSalAtl2s614:271573..273373 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009545 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009545EMLSAG00000009545-692311Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042383EMLSAE00000042383-751311Lepeophtheirus salmonisexon
EMLSAE00000042384EMLSAE00000042384-751312Lepeophtheirus salmonisexon
EMLSAE00000042385EMLSAE00000042385-751313Lepeophtheirus salmonisexon
EMLSAE00000042386EMLSAE00000042386-751314Lepeophtheirus salmonisexon
EMLSAE00000042387EMLSAE00000042387-751315Lepeophtheirus salmonisexon
EMLSAE00000042388EMLSAE00000042388-751316Lepeophtheirus salmonisexon
EMLSAE00000042389EMLSAE00000042389-751317Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775633auto775633Lepeophtheirus salmonispolypeptide
EMLSAP00000009545EMLSAP00000009545Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009545

>EMLSAP00000009545 ID=EMLSAP00000009545|Name=EMLSAP00000009545|organism=Lepeophtheirus salmonis|type=polypeptide|length=365bp
MYTNQIIQRKSTAEHCEMMLLTIIATLLLTFHDVYSSVKHAECRIVYDKF
HRQEMASRNFIAGAKWPNNEVPYEISSGYSSSDLDVIKSAMREIESKTCV
KWVPRSGQKSFVLINPREDGCFAVLGYNPNRGMHVLNLQRSNGRSTCMIM
GIAAHEMLHILGFAHEQTRPDRDQFVQIYWSRIKRDSISNYFRAIDINAR
ERPPVCDPRSTQTSFDNCYSGFKTRTFGLEYDYGSIMHYGLDDFTTTGQD
TMRVLRPVPTGIVIGNRKGMTNLDALKVKMRYDCNEDPEKKTTRKPSVEC
KDIYRECPLYKNQCKTNQFIKDGCKVSCGECTECYDMYRNCPDMKHLCGE
LDAITKGCKLTCRLC
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mRNA from alignment at LSalAtl2s614:271573..273373+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009545-705392 ID=EMLSAT00000009545-705392|Name=EMLSAT00000009545|organism=Lepeophtheirus salmonis|type=mRNA|length=1801bp|location=Sequence derived from alignment at LSalAtl2s614:271573..273373+ (Lepeophtheirus salmonis)
CTCGTGCACGACATAATTTTTTTTAGCATGAATAATCCTAAAACAAACAA AACCTAAAAAAAAAAATCCACTCGTCTTTTACAAACCACATGTGATACAA AAAAACGAATATAAATAAATGTATACAAATCAGATTATACAGCGCAAGTC CACAGCTGAGCATTGCGAAATGATGTTACTAACAATCATTGCTACTCTAC TCCTCACTTTCCATGATGTCTATTCAAGCGGTAAGTAAATGAAATAAGTA TAAATCCATTCTAGTATAACCTATTTGTCTTCAGTCAAGCATGCTGAATG TCGCATCGTTTACGATAAATTTCACAGACAGGAAATGGCTTCAAGGAATT TTATAGCAGGGGCAAAGTGGCCCAACAACGAAGTTCCTTACGAAATCAGT TCTGGGTACAGCAGTTCCGACTTGGATGTGATTAAATCCGCAATGAGAGA AATAGAGAGTAAAACGTGCGTGAAATGGGTCCCACGCTCAGGACAAAAGA GTTTTGTCCTTATCAACCCCAGAGAAGATGGATGCTTTGCAGTCTTGGGC TATAACCCTAACCGTGGAATGCATGTTTTGAATTTACAAAGGAGTAACGG ACGTAGCACATGCATGGTGAGTTAGCATTTTATTAGAAAGGCAGTTTTCT GCACTTACATACGTATCCTTCTTTTCAGATCATGGGTATTGCTGCCCACG AAATGCTCCATATTTTAGGATTTGCTCACGAACAAACAAGACCTGATCGA GATCAATTTGTTCAAATTTATTGGTCAAGAATTAAACGGGATTCTATCTC TAATTATTTTAGAGCCATTGATATTAATGCAAGAGAACGTCCTCCAGTAT GTGATCCCAGGTCGACACAAACTTCATTTGATAATTGCTACTCGGGGTTC AAGACGCGTACGTTTGGATTGGAGTATGACTATGGATCTATTATGCACTA TGGATTAGATGAGTAATTATTTAAATTATAGCAAATCCTTTAGTATAAAG TTATATTTGTTGAATTTTTAGTTTTACAACCACCGGCCAAGATACAATGA GGGTCCTTAGACCTGTACCCACTGGTATTGTTATCGGTAATAGAAAAGGG ATGACAAACTTAGATGCACTTAAAGTAAAAATGCGTTATGACTGTAACGA GGACCCAGAAAAAAAAACGACGAGAAAGCCAAGTGTTGGTAGGTAGTTAT TTTGTAGTCATTGAACGAAAAAACTAAATTCATTATATCAAATAGAATGT AAGGATATTTATAGAGAGTGTCCATTATACAAAAATCAATGCAAGACTAA CCAATTTATCAAAGATGGCTGTAAAGTTTCTTGCGGCGAATGCACTGGTT GGTTATTTTTATTTATTTGAAACTATTCACTTTTTATTATAATTTTTGAA TCCCTTTCTTGTCTTTAGAATGCTATGACATGTATAGAAATTGTCCTGAC ATGAAACATCTTTGTGGAGAGCTTGATGCCATTACAAAAGGATGTAAATT AACTTGTAGACTATGTAAGTAAAATTATCTTTAATTACCTTACAATCTTT AATTATTTTAATTYATATTTTCANNNNNNNNNNNNNNGGCTAACTTACTA TGGATATGTCTATTTGATTATTTACTCCTTATTATTAGAATATTTAATTA TTCATACTACAATTTATGTGTAAATCATTGTAATTTATATGAGTAATATT TTCAAACTATATCSTTGAGCAATGTTAAAAATAATATGTACTATGAATCC GCCATTTGATGAACTTTTTAATATTAAGGCTTACAATAAAGGAATCTGCA C
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