EMLSAT00000009570, EMLSAT00000009570-705417 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009570
Unique NameEMLSAT00000009570-705417
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s615supercontigLSalAtl2s615:659104..661746 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009570 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009570EMLSAG00000009570-692336Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000042488EMLSAE00000042488-751416Lepeophtheirus salmonisexon
EMLSAE00000042489EMLSAE00000042489-751417Lepeophtheirus salmonisexon
EMLSAE00000042490EMLSAE00000042490-751418Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779172auto779172Lepeophtheirus salmonispolypeptide
EMLSAP00000009570EMLSAP00000009570Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009570

>EMLSAP00000009570 ID=EMLSAP00000009570|Name=EMLSAP00000009570|organism=Lepeophtheirus salmonis|type=polypeptide|length=213bp
MNDSYPKTLRVPGNSINVEAQITINSSYDAILPLFRASSADWRHANFVTI
LLSRSLHLGGKHFVKKDIYQECKSSCTKHSQGKRNVVELCDDTKTCKGRK
KDIGDYAIEKCNEWSKKVGGIVPGYGRREKHEPTKGTWLACAIFCKNEAG
VWYTPRTELEQLGELPFFPDGVWCHRDGKIDYYCQNSLCLPSSYDFSFLR
KTLFDDEEEDYDE
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mRNA from alignment at LSalAtl2s615:659104..661746-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009570-705417 ID=EMLSAT00000009570-705417|Name=EMLSAT00000009570|organism=Lepeophtheirus salmonis|type=mRNA|length=2643bp|location=Sequence derived from alignment at LSalAtl2s615:659104..661746- (Lepeophtheirus salmonis)
ATGAATGATTCCTATCCTAAGACCCTTCGTGTACCTGGGAACTCCATCAA
CGTGGAAGCTCAGATAACTATTAACAGCAGTTACGATGCTATACTTCCAT
TGTTCCGTGCATCTTCCGCTGACTGGCGGCACGCAAACTTTGTCACCGTT
TTTGAACTCCCTTCTTTCCARCCTTGGNNNNNATGAGAGGGGGGGGGGGG
YTCTWTWTYGGYWCAAYAAAGGGATTTCTCGATGTACCTCTGYGTATTTT
CACGTAAAAACACGGGGCATCCAATTTCCTTTTTTTAAATTTAAAGTTGA
TTTTATTTGGGGGTTTGGAAAACTTTGACAATTATTTTTCGAATCACTTA
TTTTTTGAAAATACAAATTACAAAATGACTTAAAAAGACAAATTAAAAAA
TGATAACAATGATTTTTGTTAATTTTAAATCGTCACAATTTTTTTTTGTA
CCAAAAAAATGTGTTGTTTGGACATATTTGAAATTAACAATCATTATTAT
AATCATCATTTTTTTTTGTCTGGAGGTTATGCTTTTGCTTCCGTTTGTTT
GTGTGTAAGCCACCAGGATTACGGCAAAAGTTACCGATCGATTTTGATCA
AACTTGGTACAAATATTATATGTGGTCACAGTAAGAGACCATTAAATTTT
GAGAGGTCAAGGTAACACAAAACTTACAAAATGCATAATTGATCATAAAT
TTAATACAAATTGAGATACATCACTCAGTTTGATTATAAGTGAAGGTTTT
GCAGTCTACTAAGTGCCCATTTTGATTTCCTCTATTTGTTTGCTAGTCAC
CAGGATTATGTTAAAGTTACAAATCGATTTTAAACAAACTTGGCATGAAA
ATTATATATGGTCACTGTAAGAGGCAATTAAATTTTTAAAGGTCAAAGCA
TAAAAAAGTTCTGAATGAAGCATATCTTAAAAAAAATTGAAATACATGAA
TCAATTTGATTTCCACTTTACCGAGTGCACATCCTTAAATGTTTCAGTAA
ATATCAATGNAAAATTTATTATGTATTTTTTTACATGTGAAATTTTTTTA
CTTACTTACTTTTTGTTATATCTTGCGACCTTTCTTCGGAAAAGAAACAG
AAAAAAAGGCCAAAATACAGTTGGTACTTGGCCAATTCTTCCCAACTCAT
TAATTATTATTCAATTTTTTGGGGAAATTATACACAGCTTAACAAGAGGT
AATTCAAATTCAACCAATCAGAACACTGATTAGTAGAAATATTGACAGGT
GACAACAAAACAGGTTGTAATTTTTTGTTTTAGTGAGGTAAGGTAACACT
GTGTTAGGGTTCTCATAGTTGATTGGTTGAACATGAGTTAACTGTTGATA
AGCTCTGAATAATAGCATTTTGTTATTATTATTTTATAATAATTATACAG
TTGCTAAGGTTGGATCAATAACAAACTGATTTTGGGCCTATTTTCGTTTT
GAAGGAGAGATTGCAATATACTATAAAAATAATGGGGTATTATGTGTAAA
GATTGGAAGATTTTTCTGCTCCTTAAGTGAAATATGTACCTAATTCCTAA
ATTGTAATTTAATTTTTATATTTTGAACCATCCTAATGGAGATCTTCACA
TAATAAATTATTTTTCATTTACCCATTAAATTTCTTTTTTCATCTATGAC
AAAGAAAACAATGAAATTAATTATGATAATGTTGATTTTTTTCTCCTATG
CAACTTATGTTTTCGTATAAAAAAGAGGTTAATGAGGATTATGTTATTAT
ATGGGGCTATTGGTTAGTCTAGACAAATTTAGTTTATTATTTGCTTWTAC
AAGAACTTTGTTTTAAAAAAATCTCTCAATGAGGATCGTACTAAATATGA
AAAATTATGTTTCTGAATGTTTGAATAATCAATAAATACAAAGATAATTT
GAAATGCGGTTATAAAATCCTTTTTTCTCCGTTCTTGTTTAGATTTCACC
ACCCCCTAATTTTTTTATGAGGTATATAAGTAGACATTAAGGGGTCTAGG
GCTTCACACACAAGAAAAACATATTTGCAGCATGCAACCACTTTTAGTTC
TTGTATTCTGTGGAATCATAGTTTTTACTATGAGTCAAGATTCTCCTCTC
GAGAAGTCTGCACCTTGGTGGGAAGCACTTCGTGAAAAAAGATATATATC
AAGAATGTAAGAGCTCATGCACGAAACATTCTCAAGGGAAAAGAAATGTT
GTTGAGCTGTGTGATGATACAAAAACTTGCAAAGGAAGGAAAAAAGATAT
TGGAGACTATGCCATTGAAAAGTGTAACGAGTGGTCCAAGAAAGTAGGAG
GAATTGTTCCTGGATATGGGCGAAGGGAAAAACATGAGCCAACAAAAGGA
ACATGGTTAGCATGTGCTATATTTTGTAAAAATGAAGCTGGGGTCTGGTA
TACACCTCGAACTGAACTTGAGGTAAGATATACATGAAATATTATAGATG
TGCATACCTTATTCATCGTTTAAAATTGTAGCAACTTGGAGAGTTGCCCT
TCTTTCCCGATGGGGTCTGGTGTCATCGTGATGGAAAAATTGACTATTAC
TGTCAAAATAGCCTGTGCTTACCTTCTAGTTATGATTTTTCTTTTCTTCG
AAAGACATTATTCGATGATGAAGAAGAAGATTATGACGAATAA
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