EMLSAT00000010596, EMLSAT00000010596-706443 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010596
Unique NameEMLSAT00000010596-706443
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s705supercontigLSalAtl2s705:104304..106756 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010596 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010596EMLSAG00000010596-693362Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047221EMLSAE00000047221-756149Lepeophtheirus salmonisexon
EMLSAE00000047222EMLSAE00000047222-756150Lepeophtheirus salmonisexon
EMLSAE00000047223EMLSAE00000047223-756151Lepeophtheirus salmonisexon
EMLSAE00000047224EMLSAE00000047224-756152Lepeophtheirus salmonisexon
EMLSAE00000047225EMLSAE00000047225-756153Lepeophtheirus salmonisexon
EMLSAE00000047226EMLSAE00000047226-756154Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772250auto772250Lepeophtheirus salmonispolypeptide
EMLSAP00000010596EMLSAP00000010596Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010596

>EMLSAP00000010596 ID=EMLSAP00000010596|Name=EMLSAP00000010596|organism=Lepeophtheirus salmonis|type=polypeptide|length=465bp
MNGCTRIKAWLLICAGSMYLSTSLALEIQDSGPSSKDTSTYETENRQLDI
LAFPVGLFLGSVAGSVIFTTSTTTTTTTTTKKPFNIFGSGSSSSSDSSNS
QIILIQPTQSTTRRTTRTTRRTTRTTKRTTRTTKRTTRTTRRTTSSSSTT
TPSLIPDKVLRNFPFCGEKGVSTRIIGGKDIRENEYPWLCSLRFRGSHIC
GITLISGPPSETILVGAAHCYDKSIMHDAGPRDYSIVCGEHNLRRKDKYE
VSLKVVEVIVHPLYRRASTTGNDIAIYKVEKESLQGKMRRKKLYPICLPN
LQESFMDQSVIVSGWGVTQTRIIRGTPIKVRSIPNVAKHVKVDVISCQDR
DEFKFPKGLVCAAASGRDSCQGDSGGPLMAQQRNSDIYSWIGIVSFGVGC
AQPGYPGAYTRTSCFLDWIASQFDMKGISTSLGSSSSWSTSCPIGENNLS
GVFLSDEDVIIVEDE
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mRNA from alignment at LSalAtl2s705:104304..106756+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010596-706443 ID=EMLSAT00000010596-706443|Name=EMLSAT00000010596|organism=Lepeophtheirus salmonis|type=mRNA|length=2453bp|location=Sequence derived from alignment at LSalAtl2s705:104304..106756+ (Lepeophtheirus salmonis)
TACATTAAATATATCAACGTACGTACGTATGTCAATTTGAATTATGATGG
TATTGGGCAAGGTCTTGCAAATTCCTTCAACAGGACTCGAGGGAAAAGAG
AAGGAGGATATAATGTGAACTGTTAAGGAAGAAGCATGCCTATGTTTTTG
TCATGTTGCCCACCTCTCTATCTGTAGACAAGGCCCACATCAATGACCAT
GAATACATAATATCTACATGTTTGCATTATGTAGACAAAAATCTATACCT
GGACATGTACTACCATAGACCATAGTACATATTATATGTGTATATGACTG
AGTAAATGTCCATCCCATGAATAATACTGATACAGACCTCAGGATCTACC
GTGACATTAAGGGAAAAAGTGAAATCAAGAAGGGAAAAAAAAGGATGTTA
TTTTTGAAGTCAAGTTCACAGCATGAATGGTTGCACGAGAATAAAGGCAT
GGCTCCTGATTTGTGCCGGATCCATGTATCTATCAACCTCTTTAGCACTA
GAAATTCAAGACAGTGGCCCTTCTTCCAAAGACACTTCAACTTATGAAAC
GGAGAACAGACAGTTGGATATCTTAGCCTTTCCTGTTGGACTCTTTTTGG
GCTCTGTGGCTGGYTCCGTCATATTTACAACGTCTACCACGACAACGACC
ACAACAACCACCAAAAAACCATTTAATATTTTTGGATCTGGGAGTAGTAG
TAGTAGTGATTCCAGTAACAGCCAAATCATTTTAATTCAACCAACTCGTG
AGTGGTACTTTTCTTCAACTGTACTTAAATCAAATGATAAATTAACTAAT
TTAATTAGAGTCTACTACTCGAAGGACCACTAGGACCACAAGAAGAACCA
CTAGGACTACAAAAAGAACCACTAGAACTACGAAAAGAACCACTAGGACC
ACACGCAGAACAACTTCGTCCTCGTCCACAACCACTCCTTCATTGATACC
CGATAAAGTATTAAGAAACTTTCCTTTTTGTGGAGAGAAAGGAGTGTCCA
CGCGGATCATCGGTGGGAAGGACATTCGGGAAAATGAATACCCCTGGCTC
TGTTCTCTGAGATTCAGAGGATCTCATATTTGTGGAATTACATTGATTTC
CGGACCCCCCTCCGAAACCATACTCGTGGGAGCGGCTCATTGCTACGATA
AAAGTATAATGCATGGTATGGTACATTTATCCTAGATAATTTTTTTCTTC
TTTTCAATTACATAGATGCCGGTCCACGAGACTATTCCATTGTCTGTGGA
GAGCATAATTTGAGACGGAAAGATAAATATGAGGTCTCTCTCAAAGTCGT
TGAAGTAATTGTACATCCTTTATATCGAAGAGCTTCTACGACAGGCAATG
ACATTGCCATTTATAAAGTACATATATTACAAAATATATTTAAATCTACG
TAGGTCTCACACAAGGGGAAGCTAATTTTCAAATACTTTTGTAGGTTGAG
AAGGAGTCCCTTCAAGGGAAAATGAGGCGCAAGAAATTGTATCCCATTTG
CCTACCAAACCTGCAAGAGTCATTTATGGATCAAAGTGTCATTGTCAGTG
GATGGGGGGTAACACAAACCAGGATTATACGAGTGAGATCAATATTACTA
TTTTTTATCATCTTTAATGCATTCATTGATTGTTTACTCATTTTCTTGTA
ACAGGGAACACCAATCAAAGTTCGATCCATTCCCAATGTGGCAAAGCATG
TCAAAGTGGATGTTATTTCATGTCAAGATCGAGATGAATTCAAATTTCCA
AAAGGACTCGTTTGTGCTGCAGCATCTGGTCGTGACTCATGTCAAGGAGA
CTCGGGAGGTCCTCTCATGGCACAACAAAGAAACAGCGATATATACTCAT
GGATTGGTAATATCCTATTTTCTTCATATTCATGATAATAAATCATGTTA
ATTTTTTATCATTTTTAACCGAAGGCATTGTTTCTTTTGGTGTTGGGTGT
GCACAACCAGGATATCCTGGAGCATATACTCGCACTAGTTGCTTTTTGGA
CTGGATTGCCTCTCAGTTTGACATGAAGGGGATTTCAACGTCCTTAGGAA
GTAGTTCAAGTTGGAGTACAAGTTGTCCTATTGGAGAAAATAATCTGAGT
GGAGTATTTTTGAGTGACGAAGATGTTATCATTGTTGAAGATGAGTAATT
TATTTATTCGTTCAGCCCTAGATGAACCANGTTAATGATATATATATATA
CACATACAAATCAGTTAAGATAGGTTAAACCTTTAATAAATGAAACTGTG
TTGAAAAGTGAATAAATATAAAGACAGAGGTTACGTGATACTAAATAAAT
TGRAAAAAATAAGGTTATTCTATAGGTGGAATGAACACTGTTTACCTAAA
TAAGAAAGGTAGAGACTTGAAACTTTCAGAAATACGGCCCTCTGTTCCGT
TGGGAATGGGCCACCCCTCGCCTGATAGGTGGATTTCGGTTATGAATTTT
TTG
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