EMLSAT00000010668, EMLSAT00000010668-706515 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010668
Unique NameEMLSAT00000010668-706515
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s706supercontigLSalAtl2s706:401681..405268 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010668 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010668EMLSAG00000010668-693434Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047540EMLSAE00000047540-756468Lepeophtheirus salmonisexon
EMLSAE00000047541EMLSAE00000047541-756469Lepeophtheirus salmonisexon
EMLSAE00000047542EMLSAE00000047542-756470Lepeophtheirus salmonisexon
EMLSAE00000047543EMLSAE00000047543-756471Lepeophtheirus salmonisexon
EMLSAE00000047544EMLSAE00000047544-756472Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777313auto777313Lepeophtheirus salmonispolypeptide
EMLSAP00000010668EMLSAP00000010668Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010668

>EMLSAP00000010668 ID=EMLSAP00000010668|Name=EMLSAP00000010668|organism=Lepeophtheirus salmonis|type=polypeptide|length=811bp
MAMSTNRRGDDNGGCDEEGDQHPAASFSLGVENSPEMSREIRFAIXHQYA
ASQNKDDNFLFNGDCYMDDEEDDVLRIQRIDSRDIVYEPKRKKCKYLGKY
LMGDLLGEGSYAKVKEVMDTETLFRRAVKIMKRKKLRKIPHGEANVEREI
RLLRGLQHHNVMRLIDVFYNEEKGKIYMILEYCIAVLKDMLESSPSKKFP
PSQAHEYFIQLATGLEYLHSQRVVHKDIKPGNLLLNTSGVLKIADFGVAE
CLDLFEDPCKAQLKQSQGTPAFQSPEIANGLEXLPAYKVDVWSAGVTLFN
FVTGQYPFEGETIFRLFEAIGKGIFEFPLDGAGLDYKLKDLISAMLTKDV
HNRLSVSQILNHDWVKKKHIPLGPHVPISSSAHSRDEDSTVKDPDQSTSL
IPYLVSLHFGDEDEEENNSQINRETPNPSQLPEHESSTKKDDSKTTKCLK
QEGQLCAQHCLNVLLQGPYYTAIVLASLANQLDVEEGIHYEPTNRPNDAS
HNMDDTGFFSVQVLSRALQVWGLDFAQLNSSETRVVNARDYPTIQKGYIC
NFEQHWLTIRRIGNQWFNLNSLLAYPELLSDTYLSEFIAQLQREGYSIFV
VFGEFPHCEADDILRMTPAVQAQPPPLINEAPKRGQETASNDPDLQRAIG
MSVGQDVDLQKVLQLSRESVMAEAMERQRKNPEAPLELPFNFSQSDGDSD
LDLAIKLSEASFAQEVMKEQKDMATCISGSSTVLPSSSKRKSNKGYGPPT
SMYSSKISTSESVPTQTQGPDGQKLGGEDKVEEVTPNMHDIRLRRIAFLE
KQVQEQKGNKS
back to top

mRNA from alignment at LSalAtl2s706:401681..405268-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010668-706515 ID=EMLSAT00000010668-706515|Name=EMLSAT00000010668|organism=Lepeophtheirus salmonis|type=mRNA|length=3588bp|location=Sequence derived from alignment at LSalAtl2s706:401681..405268- (Lepeophtheirus salmonis)
TTTTCTGTGTGTACATCTAATCATTATTTCAAATCTGTGATACATTTAAC GCAATTGATAATTAAAATTAATGAATTACTCATAATGGCGATGTCAACGA ATAGACGAGGTGATGATAATGGAGGATGTGATGAAGAAGGGGATCAGCAT CCTGCTGCCTCCTTTAGTTTGGGGGTTGAAAATTCCCCAGAGATGTCAAG AGAAATTAGATTCGCTATTYCTCATCAATATGCTGCGTCTCAGAATAAGG ACGATAATTTTTTATTTAATGGTGATTGTTACATGGATGATGAAGAGGAT GATGTTCTACGGATTCAACGGATAGATTCTCGTGATATCGTTTATGAGCC TAAACGGAAAAAATGTAAATATTTGGGAAAATATCTGATGGGGGATCTTC TTGGTGAGGGATCCTATGCTAAAGTGAAAGAAGTCATGGACACGGAAACA CTATTTAGGAGAGCAGTTAAAATCATGAAGCGAAAAAAACTAAGGAAAAT TCCTCATGGAGAAGCAAATGTGGAACGAGAAATAAGATTACTCCGAGGTC TTCAGCATCATAACGTTATGAGGCTCATTGATGTATTTTATAATGAAGAA AAAGGAAAAATCTACATGATTTTAGAATACTGCATCGCAGTTCTCAAAGA CATGCTTGAGTCTAGTCCTTCAAAAAAGTTTCCACCATCTCAGGCACACG AATACTTTATACAATTGGCAACTGGGCTGGAGTATCTACACTCTCAAAGA GTGGTTCATAAAGACATTAAACCAGGGAACCTACTATTAAACACATCTGG AGTTTTGAAAATTGCTGATTTCGGAGTTGCAGAATGTTTGGATTTGTTTG AAGACCCATGCAAAGCTCAATTAAAGCAAAGTCAGGGCACACCTGCCTTT CAATCCCCAGAAATAGCCAATGGGTTAGAATKCTTRCCAGCCTATAAGGT GGATGTTTGGAGTGCTGGGGTCACATTATTTAACTTTGTTACTGGACAAT ATCCCTTTGAGGGTGAGACCATTTTCCGTTTGTTTGAAGCTATTGGCAAG GGAATATTTGAGTTTCCCCTAGACGGAGCTGGCCTAGACTATAAACTGAA AGATCTCATTTCTGCTATGCTAACCAAAGATGTGCATAACAGACTAAGCG TTTCTCAGATTTTGAATCACGATTGGGTAAAGAAGAAGCATATTCCATTG GGTCCTCATGTCCCTATCAGTTCTTCTGCTCACTCTCGTGATGAAGATAG TACTGTAAAAGATCCAGATCAATCCACTTCGCTAATACCCTACCTAGTAA GTCTTCATTTTGGGGATGAGGACGAAGAAGAGAATAATAGCCAGATTAAT AGGGAAACGCCTAACCCTTCCCAATTACCGGAGCATGAATCCTCGACAAA AAAGGATGATTCAAAGACAACTAAATGTTTAAAAGTGAAGAAGCTGAGCA GTGGATGTGCCATTACATAGCAGTTAGACAGTATTCGGGAGTATTATATC TAATTAAGAAAGATATTCTTATATTCCTTTATATATTATTAATGTGTCAC TCAATACTGCAGATGTCTTTGGAAATCAGAAGAAAGTATGATAATAATGG TTACGTTCATTATTATTATTATTATTATTTTTTTTGATTGCTGGAAAATA TGTTTTAGAATTTATTAAATTTAATATTATTCAATCTTTCATTAAATACA TGCAGATTAATTTTTTTGACTCTTATCTTCTGTATGACAAATCTATATCA AGACAATGTGTTTTCTCCTTATGCTCGAGTCACATATATCATACAATGAC ATGATTTGCTATCTATTTAAGTGAAATTAAGTCATTTCCTCTTCAGTTTA AAAAAACTTTTTTTTTAATAATATAAAGAAAAAAACGCTAAAAAAATCAT TTTCATTCGATGCCATTTAGTTACTTTATCCTAAATTCTCGGTAAAATAG TAATAATAATCATGTCAAATTTTTAGTTTCGCTCATTGTTTAGTGTGCAA ATTTATTTCGCCCCCTTTCCCCTGCCTATTATATACGCTTAAATATTTTA TTCCTTTAATCAAACTGGTGATGTTAATATTTATATATATTATACAATAT TTTCGTTTGTCGCAAATTTGCTGTTATTGANAATTAAAACTAATTWTTAA AAAAAGCATAATTWTTWTATACCTWTGTTTNGTTAGAACAGATAATATAA TTTAATTTCTAATGAAATTCCCCTTTTTATTTATTTACATAGTTACAACG AACTCTAAATATCTTTTTGTATAACTAATAATTTATTTTTTATGAACTGA CAGCAAGAGGGTCAACTCTGTGCCCAACATTGCTTGAATGTGCTACTTCA AGGACCTTACTATACGGCCATAGTTTTGGCATCTCTAGCTAATCAATTGG ACGTCGAAGAAGGTATACATTATGAGCCAACGAATCGTCCTAATGATGCC TCTCATAATATGGATGACACAGGGTTTTTCTCTGTTCAAGTCTTAAGTCG AGCTCTTCAAGTATGGGGTTTGGATTTTGCACAGTTGAACTCTTCGGAAA CTAGGGTAGTGAATGCAAGGGATTATCCAACGTGAGCATATCCTACTATT TTAAAGGCTGAATTTGATTATTTTTTTCTTATTCAATAATAGAATCCAGA AGGGATATATATGTAACTTTGAGCAGCATTGGTTGACAATTCGTCGAATC GGAAATCAATGGTTTAACTTAAATTCACTTTTGGCCTATCCTGAGCTCCT CTCTGATACTTATTTATCCGAATTCATTGCTCAACTGCAAAGAGAAGGAT ATTCGATATTTGTGGTCTTTGGGGAGTTTCCCCACTGTGAAGCAGATGAT ATTTTAAGAATGACTCCTGCCGTTCAAGCTCAACCTCCTCCTCTAATTAA TGAAGCTCCCAAAAGAGGACAAGAGACAGCGTCTAATGATCCTGATCTAC AAAGAGCGATTGGTATGAGTGTTGGTCAAGATGTTGACTTGCAAAAAGTT CTTCAATTAAGTCGGGAGTCTGTCATGGCTGAGGCGATGGAAAGACAAAG AAAAAACCCAGAAGCGCCTTTAGAAYTACCTTTCAACTTCAGTCAGTCAG ACGGAGATTCTGATCTGGACTTGGCTATTAAATTAAGTGAGGCATCTTTC GCGCAAGAAGTCATGAAAGAACAAAAAGGTAACTTATGAGTTACTGATCC ATGCTGTATTTTCTTACAGTCCTTCTATTTGTCTTCCCTAGATATGGCAA CATGTATCTCAGGAAGCAGTACTGTGTTACCATCTAGTTCAAAAAGGAAG AGCAACAAAGGATATGGACCGCCTACGTCCATGTACTCATCAAAGATATC GACTAGTGGTGAGTTTTCAAATAAATAAGTTTTAAGTTTATTATTTAGTT AATCCTAMCCACCTCTCTCTTTCTTTTCAAAAGAATCCGTTCCAACACAG ACTCAAGGACCAGATGGACAAAAACTTGGCGGAGAGGATAAGGTTGAAGA AGTTACTCCAAATATGCATGATATCCGTTTAAGAAGAATTGCATTTTTAG AGAAACAAGTTCAGGAACAAAAGGGAAATAAATCATAA
back to top
Add to Basket