EMLSAT00000010698, EMLSAT00000010698-706545 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010698
Unique NameEMLSAT00000010698-706545
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s709supercontigLSalAtl2s709:489794..491474 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010698 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010698EMLSAG00000010698-693464Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047639EMLSAE00000047639-756567Lepeophtheirus salmonisexon
EMLSAE00000047640EMLSAE00000047640-756568Lepeophtheirus salmonisexon
EMLSAE00000047641EMLSAE00000047641-756569Lepeophtheirus salmonisexon
EMLSAE00000047642EMLSAE00000047642-756570Lepeophtheirus salmonisexon
EMLSAE00000047643EMLSAE00000047643-756571Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778104auto778104Lepeophtheirus salmonispolypeptide
EMLSAP00000010698EMLSAP00000010698Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010698

>EMLSAP00000010698 ID=EMLSAP00000010698|Name=EMLSAP00000010698|organism=Lepeophtheirus salmonis|type=polypeptide|length=257bp
MWIKNFIFVTTYVSLATSFSTVIYDSCGYSTSKGLKGCKPRTSNRIIHGV
GVEEGDIPWQVAIKLKPSSGPSFWCGGTIIRQETGVQYNFSMYIMHPSFK
KIDGKNIHDIGLVQIKDSFDFSSVIQPACLPFYQTEPVMTESSVVVSGWG
RTDPKVDLAASRLMRADLYVKNISSSICKRGKEDVVDPDSLLCIWNPPSS
GCFGDSGGPVTLEESGRXILVGXISQGVQCGATGQGAINVKVSYYLDWIY
SNIMKLC
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mRNA from alignment at LSalAtl2s709:489794..491474+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010698-706545 ID=EMLSAT00000010698-706545|Name=EMLSAT00000010698|organism=Lepeophtheirus salmonis|type=mRNA|length=1681bp|location=Sequence derived from alignment at LSalAtl2s709:489794..491474+ (Lepeophtheirus salmonis)
CACTTCTATAATGTGGATCAAGAACTTTATTTTCGTTACAACATATGTCT CTTTGGCAACTTCTTTCTCGACGGGTAAGTAGTATATAGTGACTCCGTTT TCATATTATTTATACATATTGTACTAAAGTAATCTATGATTCATGTGGAT ACTCAACATCAAAGGGATTAAAGGGATGCAAACCAAGAACATCAAACAGA ATTATTCATGGGGTTGGAGTGGAAGAAGGAGACATTCCATGGCAAGTGGC TATTAAATTGAAACCCTCATCTGGGCCGAGTTTTTGGTGTGGAGGAACAA TCATCAGTGAGTCATTCGTGATAACCGCAGCTCATTGCTTAAAAGACAGA ATAATCTCAGGGATAAATATTAAACTAGATATTTCAAAATGCTACGTATG TATGTAATCTTTAAAAAATGTGACAATGGTCCAAATCCCGGGATTTATTT ATTATTTGTTCCTATTTTGAAATGTTAGGACCTATCAAGAGAGAAAATCT TTCATGGCATTACTTTTATTGAATCTCACAACCTTTCATGTTAAAAGAAA AGGCAAAAATGGGATTAAATCAGTTTCTAGGACTCTTCTCAAATAGGGAA TAATTATTCAACACTTCTGGGGAAGTGTTTATAGCTTAATTACAAGAAAT AATTCAAATTCAACCAATCAATGTACAGAACACTGATTAGTTGATGTTAG TAAGTTATGACCGTGTTCTATTGTCTCTCAAAGTTTTTATATTTTTGATA ACATACTCTCAAAGGCTTTTATGATTACTGGGATTTAGACTTTTTTCACA TATTTTACAATTATTTAAAAAATGTGAGAACAAAATTGATATTAATGGAA TATTGGGATTTGCAGGTGTATGCTGGGGGGAATCTAGGGCAGGAAACTGG TGTTCAATATAATTTTTCAATGTACATAATGCATCCATCATTTAAAAAAA TTGATGGAAAGAATATACACGATATTGGTCTGGTACAAATAAAAGATTCA TTTGATTTTTCTTCGGTTATACAACCAGCATGTTTGCCCTTTTATCAAAC GGAGCCTGTCATGACTGAATCTTCAGTCGTAGGTAATCTTCAGCTATATA TATTTGTTATTCAATTATATTTTTTTATATGCACAATGTACATTTAGTAA GCGGATGGGGGCGTACAGATCCAAAAGTAGATTTGGCTGCTTCCCGTCTC ATGAGAGCGGATTTATATGTGAAAAACATATCATCCAGTATATGTAAACG TGGAAAAGAAGATGTCGTTGATCCTGATTCATTATTGTGTATTTGGAATC CTCCTTCTTCTGGATGTTTTGGAGATTCTGGTGGTCCAGTTACACTTGAA GAAAGTGGTAGGMGCATACTTGTTGGAGMCATCTCACAAGGGGTCCAATG TGGAGCCACTGGTCAAGGTGCAATAAACGTTAAGGTTTCATATTACTTAG ATTGGATATACAGTAATATAATGGTGAGTTGGCTAAAATAATACATATCA ATAACTTTGACTATTCCTATATATATTTTTTAGAAACTTTGTTAAAAAGT ACGATTTTTGATCTCTGCTTTACAAATTATTTTCGTTGATAGCAGGGAGT ATATATAAAGTATTTTTTAAAGGCATATTTACTTGTAAAGCATATGTATG TATACAAATATATAGAAATGTAGAAATGGAG
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