EMLSAT00000011118, EMLSAT00000011118-706965 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011118
Unique NameEMLSAT00000011118-706965
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s7539supercontigLSalAtl2s7539:315..1161 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011118 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011118EMLSAG00000011118-693884Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049732EMLSAE00000049732-758660Lepeophtheirus salmonisexon
EMLSAE00000049733EMLSAE00000049733-758661Lepeophtheirus salmonisexon
EMLSAE00000049734EMLSAE00000049734-758662Lepeophtheirus salmonisexon
EMLSAE00000049735EMLSAE00000049735-758663Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767861auto767861Lepeophtheirus salmonispolypeptide
EMLSAP00000011118EMLSAP00000011118Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011118

>EMLSAP00000011118 ID=EMLSAP00000011118|Name=EMLSAP00000011118|organism=Lepeophtheirus salmonis|type=polypeptide|length=104bp
MKLIHYIAFVQILVLVVDFCSATXFPXKFVGNWCEDKASRSKVSDVMRXL
GLSDELIKKYEEGNPMKLDIVYNPXKNDYIFNGTDSIXXXIXWTIQXNSK
RKKS
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mRNA from alignment at LSalAtl2s7539:315..1161-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011118-706965 ID=EMLSAT00000011118-706965|Name=EMLSAT00000011118|organism=Lepeophtheirus salmonis|type=mRNA|length=847bp|location=Sequence derived from alignment at LSalAtl2s7539:315..1161- (Lepeophtheirus salmonis)
ATGAAACTGATTCATTACATCGCTTTTGTACAAATCCTTGTACTTGTTGT
TGACTTTTGTTCTGCAACASACTTGTGAGTATATAACTTATAAATAATAG
AATTTGGATTTGTATATCTACCATGGGAGACAATCTATTTATTGGACTGG
CTAAAAAATAAAATTTTATGGAACAATGGAATGGGACTTCTAAACATGTA
GAAAAAATGTTCCAAAAAGTTTTTTACTAATTGTTTCTCAATTTATTCAA
AGAGGGGTCTGTATTTGTGTACTCTTATTATCACGTAGCCCCTTCCAAGC
TTTGCTCTGGCTATATATTACATGCATTCTGGATATTCTGATTTAATCAT
ATGCAGGATCTGGGAAAAAGATAATTCTGTGGGACTTTTTCATTTTCAAG
ACAAATAGCTTCACTATTTCGAATACAAAATTTACTGCATAGAACAACTA
TATATATACTTGTTATAATTTACTTATAATTTCAGTCCATSTAAATTCGT
TGGGAATTGGTGTGAAGATAAAGCTTCGAGAAGTAAAGTTTCAGATGTAA
TGAGAAYACTTGGTGTGATTATTGATAATTTCAATTATTGTTGTATATTT
ATCCAAATTTCTTTATAGGACTATCTGATGAGCTAATCAAAAAGTATGAA
GAAGGCAACCCTATGAAATTGGATATTGTTTATAATCCTAYGAAGAATGA
TTACATCTTCAATGGAACAGGTAAAATATACATCTATTAATACAGATAAT
GAAGTAGTTATATTTTATATTAAATATCTTTTAAGATTCTATTGSACKTC
STATAAMTTGGACTATTCAAANGAACTCAAAGAGAAAGAAAAGTTGA
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