EMLSAT00000011202, EMLSAT00000011202-707049 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011202
Unique NameEMLSAT00000011202-707049
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s761supercontigLSalAtl2s761:62305..66131 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011202 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011202EMLSAG00000011202-693968Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050040EMLSAE00000050040-758968Lepeophtheirus salmonisexon
EMLSAE00000050041EMLSAE00000050041-758969Lepeophtheirus salmonisexon
EMLSAE00000050042EMLSAE00000050042-758970Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771089auto771089Lepeophtheirus salmonispolypeptide
EMLSAP00000011202EMLSAP00000011202Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011202

>EMLSAP00000011202 ID=EMLSAP00000011202|Name=EMLSAP00000011202|organism=Lepeophtheirus salmonis|type=polypeptide|length=810bp
MVIGDEELRRRLKEQNYPIPPITDTTRHVLLKKLQQLENEESCEGAEESL
GGRGXLLSKPLFDYSSAEDEEGGGGGSLSRNEPQPFKKKSSTLRRRVIHT
NGGSIPPVAGPVSKSYKTLANGYHSKRKSLLSHSETEEDDDDDDDSEEDQ
HSVGLYGKHAQHEEEEEEDEEEEEEEEEEEEEEEEENSPMNPSGNRSSSS
SYLKGTPMMRDRFASSTPLNSVRSTASYLVDTDSSSPRLKPEFSSLSSPT
LRKQIASNKESFGSLGEALSSLPQNSGSNSLLTNMRPMLFSNGGTNSVLT
QAAPPVSHLQKEFKTKRSSFCNSHTISKIIVVLAGIFFSGIAFKYSNLRP
NPNIQNRIVICEKPSFPENCVNVEDAEKFTHMHRDVVDILEKKGXEIMXG
GDEDVSSPPLSSHEDQVSFQGNATFSYSIQELYTDLKSIPENKALDDGCF
SRFIHLLAQNPQWGVLVSSNKDEISLYNPPINWSCWLSLKIGLTYSFLCS
VLSWILKGIIVLSICYGLYRWRLWSQDRKLREHQDVFELVEHVLSILATQ
NTLVLREGRGSTSXPCIAINHIRDQLISPQDRDKKKKLWDKVVNYIRKSE
SRVREDAQKIYGEEVKVWQWIPDIRWGNSSLNQHGPNPYVPGVAAXXXPP
PPQHSPPSMPSSSAHLTSSPQWQGSAFSSLNKNVAAPQVAPTSCLKVRHM
FDRTIMQSSPTQWVWKVKEEILRRCSGSANIIHIAVDKQSPEGCVYIKTS
NTEGAGAVFRCLHGQWYRGNLVTVKYLREERYQERFPESPLAKNQLLSQK
XYNXYYRSIN
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mRNA from alignment at LSalAtl2s761:62305..66131+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011202-707049 ID=EMLSAT00000011202-707049|Name=EMLSAT00000011202|organism=Lepeophtheirus salmonis|type=mRNA|length=3827bp|location=Sequence derived from alignment at LSalAtl2s761:62305..66131+ (Lepeophtheirus salmonis)
ATGGTAATAGGTGATGAAGAACTACGTCGTCGATTGAAGGAGCAGAATTA CCCAATTCCTCCTATCACTGACACGACGCGCCATGTTTTACTCAAGAAGC TCCAACAATTGGAGAATGAAGAGAGCTGCGAAGGGGCGGAGGAGTCCTTG GGGGGCAGGGGAASCCTCCTGAGYAAGCCACTCTTCGACTACAGCTCCGC AGAGGATGAAGAAGGAGGAGGCGGGGGYTCTCTTTCTCGCAATGAGCCAC AGCCCTTTAAGAAGAAGAGCTCCACGCTTCGGAGGCGAGTCATCCACACG AATGGGGGCTCCATCCCTCCTGTCGCGGGGCCCGTCTCCAAATCATACAA AACACTCGCCAACGGATATCACTCCAAGAGGAAATCCCTTCTCTCACACT CGGAAACGGAAGAAGATGACGACGACGACGACGACTCTGAAGAGGATCAA CACTCCGTAGGTCTCTACGGGAAACATGCTCAACATGAGGAGGAAGAAGA AGAAGACGAGGAGGAAGAAGAAGAAGAAGAGGAGGAAGAAGAGGAGGAGG AAGAAGAGAATTCTCCCATGAACCCTAGTGGAAACAGATCCTCTTCATCC TCATACCTTAAAGGAACTCCCATGATGCGAGATCGATTTGCGAGCTCCAC TCCTCTCAATTCCGTACGATCCACTGCTTCCTACTTGGTGGACACGGACT CATCATCTCCTCGCCTCAAACCAGAGTTCTCTTCTCTCTCCTCGCCCACT CTGAGGAAACAAATTGCATCGAATAAAGAGTCCTTCGGTTCGTTAGGTAT TATATCACACTTGATCAACTTATACCTTTACAATTATTTTACTACATCTA TGCTGCCCTCTCATAAGTGACCCAAACTCAAAGACACTCCTTGTTTTTAA GTTGCATCAAAAAATAGGCTCAAAATAATTATGTACTTTTATTTATTCTC TTGAGTGCATAGATTCGATACTTGGTTGTTTCTAGAGAAGGAAAAATACT CAATCTATAATAACTTCAAATACCATTCCTAGGCCAAATGACGGTATTGT AATACTATAATGTTTACATAAATGTACTTGATCAGTGCGACTCCATCTGA CCAATGGAAGGAAAAGCTATGTGGCATATAAGTCAATTATCCATACACTA ACATTTCGAAAGACAGAGTTGTGTCGATCTTGAGGACTGCAGTCCGGCCT GGTCCGTCTCGGTATGGTCCAGTTCAGTCTTGCATATCAGTCTTAAAACT AATAAAGTTCCGTCCTTGACGACGTCACTCAACTATATTTCTTCTTTTTT AAATCAGTTCCAAAGGACTGGTCCTAAGATTGGGCTGGACCAAATAAATA AGGAATGACACAACACGTACTTAAAAATGCTTATAAATGCCCTAAGTAGC GTTGATGGAGTCAAATATAATTGGTAAATGACCTATGCAACGCAAATTCC TCACTTACCAAAGATGTGATACATTGTATTAATTTTGTTTCAGAAGACCC ATAAAAAACTAATATTCCATACAAATTTATAGATGGTTAGCAAGTTTCAA ACTTATAACCAACTATTTACATAAAGCAAGATACTGTCCACATAGGGCAG TTGTTTTATATGAGAGGGCAGTATGTACTTCAATTATTATTTGTTATATT TTTATATTCTATGAAGACAAAAACAAGAACTCAGAAACGTCATTGATAAG TTGATCATTCCCTAACTTCTAACTCTTAATCCATTATGAACACGAAAATT TAATCTCCTTTTTCTCATCACATTTGTAGGCGAGGCTCTGTCATCATTAC CCCAGAACTCTGGATCAAATTCCCTACTCACAAATATGCGGCCCATGTTA TTTTCAAATGGTGGTACAAATAGCGTCTTAACCCAAGCAGCTCCACCCGT ATCCCATTTACAAAAAGAGTTTAAAACCAAGCGCTCTTCTTTTTGTAATT CTCATACAATATCCAAAATTATAGTCGTTCTAGCAGGAATATTCTTCTCA GGAATCGCATTTAAGTATTCTAATCTCCGTCCAAACCCCAACATACAGAA TCGTATTGTTATTTGTGAGAAACCCTCCTTCCCGGAGAACTGCGTTAATG TAGAAGATGCTGAGAAGTTCACTCATATGCATAGGGATGTGGTTGATATA TTGGAGAAGAAGGGAGMGGAAATTATGTGMGGMGGAGATGAGGATGTCTC TTCRCCGCCATTATCATCACATGAGGACCAAGTTTCCTTCCAAGGGAATG CCACCTTTTCATACTCTATTCAAGAGCTGTACACGGATTTAAAGTCAATT CCCGAGAACAAAGCTTTGGACGATGGTTGTTTTTCTAGGTTCATTCATTT ATTGGCTCAAAATCCACAATGGGGAGTGTTAGTCAGCTCAAATAAAGATG AAATCAGTTTGTACAATCCTCCAATTAATTGGAGTTGTTGGTTGTCTCTC AAAATTGGGTTGACATACTCTTTCTTATGTTCTGTTCTGAGTTGGATTCT GAAGGGAATCATTGTTTTAAGTATTTGTTATGGACTGTATCGTTGGAGAC TCTGGTCTCAAGATAGAAAACTCCGTGAACATCAAGATGTTTTTGAACTC GTGGAGCATGTTCTTTCTATTCTTGCTACTCAAAACACTCTAGTTCTTCG AGAAGGACGTGGCTCAACCTCARCTCCCTGTATTGCTATCAATCATATTC GGGATCAACTCATTTCTCCACAAGACAGAGACAAAAAGAAAAAACTCTGG GATAAAGTAGTCAATTACATACGTAAGTCCGAATCTCGAGTACGTGAGGA TGCTCAAAAAATATATGGGGAAGAAGTCAAAGTATGGCAATGGATCCCTG ATATTCGATGGGGAAATTCCTCATTGAACCAACATGGTCCAAATCCTTAT GTACCCGGAGTAGCTGCCKCTKCTKCKCCGCCGCCACCCCAGCATTCTCC TCCATCGATGCCATCTTCGTCAGCTCATCTAACTTCCAGTCCTCAATGGC AAGGCTCAGCTTTTAGCTCATTGAACAAAAATGTAGCTGCCCCTCAAGTT GCTCCCACATCTTGCCTCAAAGTGAGACATATGTTTGACCGAACCATCAT GCAAAGTTCACCCACACAATGGGTCTGGAAAGTAAAAGAGGAGATTCTAC GTCGATGTTCAGGATCTGCGAACATTATTCATATAGCTGTAGACAAACAA AGCCCAGAGGGTTGCGTCTACATTAAAACTTCTAACACGGAAGGGGCCGG AGCTGTTTTCCGATGTCTTCATGGCCAGTGGTACAGAGGTAACCTTGTTA CCGTTAAATATCTGCGAGAAGAAAGATATCAGGAGCGGTTCCCTGAATCG CCCCTTGCAAAGAATCAACTTCTTTCCCAAAAATAWTATAATNCGTATAT ATATATATATATTTAGAAAGTTAACTCTTCAAAGAAAAAAGAAAGATTAA AAACTAACTCAAGTTTTGGAATAAATAAAAGTTATTAATATTTTTAAAAT TTTGTATTCTCGTGTATGTATATATATATATATATAAATTATATTTAACT TGTTTTATCATATTTGACATATAATGGTATCACTCAAGTTCAGGGTGGGG ACAAAGGTGGTGGAGAAGAAACGAGAGGATTTAAAATTAAGAAATATATA TTATATTAATTGTACTATTATTGAATGAGTAATTAATTAACTTTATTATT TTTATAAGTCAAAAAATCCTTCACAGAAAAAAATATGAATTCATTAATAA ATTGTACCTGAGAGATGTAAATTATAATTTATTAATATTATTATTGCTGC TACAGATATTATAGATCAATTAATTAA
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