EMLSAT00000011356, EMLSAT00000011356-707203 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011356
Unique NameEMLSAT00000011356-707203
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s784supercontigLSalAtl2s784:329234..333047 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011356 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011356EMLSAG00000011356-694122Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050765EMLSAE00000050765-759693Lepeophtheirus salmonisexon
EMLSAE00000050766EMLSAE00000050766-759694Lepeophtheirus salmonisexon
EMLSAE00000050767EMLSAE00000050767-759695Lepeophtheirus salmonisexon
EMLSAE00000050768EMLSAE00000050768-759696Lepeophtheirus salmonisexon
EMLSAE00000050769EMLSAE00000050769-759697Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776449auto776449Lepeophtheirus salmonispolypeptide
EMLSAP00000011356EMLSAP00000011356Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011356

>EMLSAP00000011356 ID=EMLSAP00000011356|Name=EMLSAP00000011356|organism=Lepeophtheirus salmonis|type=polypeptide|length=625bp
MTALVEGATNGHKEEEEEEEEWDENEEWQWETESEEEEAPHTPSSIPGAK
KPQPNIQIEGSLVKIDRKQPVDWSEDEFDDDDDKSYIPPPPPPPPPSDCI
ISHPETTKKRSEALDNLKKKPAKTPDWSDLMKEIGGFKYGHKHLLNKVIC
NDRSKPYLSKTKVEGQFVFDSEKTKEKKSILKDIKKGVRXKTRIRNFRRQ
ITKEDEQMAEMDALDENEEFIKLRDDLESTKQLLELEVRSKSLLEKDNKR
MQSEMERLRMDLKRSKNEDINGDTENEAPSRRSSIQMKRRSIIRMISENE
ALAEEDESKEDKEEEAEDELLRQEAEEARLLAEEWENKYKEMQRQMKEIE
GGSGKHHKKSSTVSEPGNLYTRTQEDDGNESEGSLEGENSDDEDWMSKRE
VHTLKQKLKTVHDKREILNRERNLLNERIGNLIGSISSEVKSRQNLKKEI
KDMNEAFKREIAEMCSDEFTTAELEDCYFSDEDTLVSSKLPVSKEKVQPD
WEDEEVVSEEEEEEEETLSEIIQLAEDELEEEEIKQFQELFDLQKESDEM
KKVKERLESLTQNKEETTEFLNAQIESQTANVHNMRKCNFSIKSKIDRLH
DVLQYEKERHQDLKQELTRMLADIQ
back to top

mRNA from alignment at LSalAtl2s784:329234..333047+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011356-707203 ID=EMLSAT00000011356-707203|Name=EMLSAT00000011356|organism=Lepeophtheirus salmonis|type=mRNA|length=3814bp|location=Sequence derived from alignment at LSalAtl2s784:329234..333047+ (Lepeophtheirus salmonis)
AGAGAGGGTTGGCTGCCGATTTGCACGCTTTACGCAAGTTGGCAAGATTT TGTAATTTTTTTTTTTGTTTCGAAAGCAAGCGCTCCTTGAGTGAGTACTT AACTTATATTTGTATAATTTACTACAAACAATTCCTCGTCCTTCCTGCAA TTCAAAATAGTTTCTGTCTTATTTTTTCAGATCATAAAAAGTCCTTGAGT GATTTCTTTCCTTCCTATTCAAATACATAGAAAAGTATAGCTTGCTATGA TGACCTGTATTCAATTACAATTAGTTGAATAACAATTAATCATGATTTAA GTGAGTTACAAAATCATTATTAAGTTGAGGAGTATATATAAATAAGAAAG GAAGTGAAGTGTGCAAAAATGACAGCATTAGTTGAGGGCGCCACCAATGG ACACAAAGAAGGTAAGATGTCCCATAAGTACTAAAAACTCAACTATCTAA TCACTGAATCCTTTTCTTCAAAGAAGAGGAAGAAGAAGAGGAATGGGATG AAAATGAGGAATGGCAATGGGAAACCGAGAGTGAGGAAGAAGAGGCTCCT CATACACCATCCTCCATACCAGGAGCCAAAAAACCACAGCCCAATATTCA AATAGAAGGAAGTTTAGTTAAAATAGATCGTAAGCAACCAGTGGACTGGT CAGAGGATGAATTTGACGATGATGACGACAAATCCTACATTCCGCCTCCC CCACCCCCGCCACCTCCAAGTGACTGCATTATTTCACACCCAGAAACAAC CAAAAAGAGAAGTGAGGCTCTTGATAACCTGAAGAAAAAACCAGCAAAAA CCCCAGATTGGAGTGATCTTATGAAGGAGATTGGAGGTTTTAAATACGGT CATAAGCATTTATTGAATAAAGTAATTTGCAATGATCGGAGTAAACCCTA TTTAAGTAAAACAAAGGTTGAAGGACAGGTACTTTGAACAAACCAACATT TGTTCATAGTTCATACTCAACTTTTATCTTTCAATATTTTTTCACAGTTT GTTTTTGACTCAGAAAAGACAAAAGAAAAGAAAAGCATTCTCAAAGATAT CAAAAAGGGAGTTCGTNCTAAAACACGTAAAAACAAATGATAGAAGCAAG CCAAATCTTCGAGGTAGGTGCTCAATTCCCTTTTAAAACTGTYATCAACT TTTCTTATTTTATTTTAAAGGCATTCGCAACTTTAGACGTCAAATCACAA AGGAAGATGAGCAAATGGCTGAAATGGATGCTTTGGATGAAAACGAGGAG TTCATAAAGTTACGCGATGATCTCGAATCCACCAAACAGCTCTTAGAGCT GGAAGTTCGATCCAAGTCTCTTTTAGAAAAGGATAATAAACGAATGCAGT CGGAAATGGAAAGGCTTCGTATGGATCTAAAGAGGTCCAAAAACGAAGAC ATAAATGGAGATACTGAAAACGAGGCTCCATCGCGAAGATCCTCTATTCA AATGAAACGTAGATCCATAATTCGAATGATAAGCGAAAATGAGGCCTTGG CAGAGGAGGATGAATCGAAAGAGGATAAAGAAGAAGAAGCTGAAGATGAG TTGCTGCGACAAGAGGCGGAAGAAGCTCGACTTCTGGCAGAGGAGTGGGA GAACAAGTATAAAGAAATGCAAAGGCAAATGAAGGAAATCGAAGGTGGGA GTGGAAAGCATCATAAAAAGTCATCAACTGTCTCTGAGCCCGGCAACTTG TACACTAGAACGCAAGAAGACGATGGCAATGAGTCTGAGGGATCCTTGGA AGGAGAGAACAGTGATGATGAGGACTGGATGTCGAAAAGAGAGGTTCATA CGCTTAAACAGAAACTCAAGACAGTTCATGATAAGAGGGAAATATTAAAC CGAGAAAGGAATTTATTGAACGAACGAATTGGTAATCTTATTGGAAGTAT TTCCTCCGAGGTTAAATCCAGACAGAACCTCAAAAAGGAAATCAAGGATA TGAACGAGGCATTTAAGCGTGAAATTGCAGAGATGTGTTCAGACGAATTC ACTACTGCAGAGCTGGAGGACTGCTACTTCTCGGATGAAGATACTCTTGT CAGTTCAAAACTTCCTGTGAGTAAGGAGAAGGTCCAGCCAGACTGGGAGG ACGAAGAAGTAGTGTCTGAAGAAGAAGAGGAGGAAGAAGAAACACTAAGT GAGATCATCCAATTGGCAGAGGATGAATTAGAAGAGGAAGAAATTAAGCA ATTCCAGGAATTATTTGATCTACAAAAAGAGTCTGATGAGATGAAGAAAG TAAAAGAGAGACTGGAGTCTCTGACTCAAAACAAGGAGGAAACGACTGAG TTCCTAAATGCTCAAATAGAGTCCCAAACTGCAAACGTTCACAATATGAG GAAATGTAACTTTTCAATAAAGTCTAAAATTGATAGGCTCCATGATGTTC TTCAATACGAGAAGGAGAGGCATCAAGATCTTAAGCAAGAGCTAACACGG ATGTTGGCAGATATCCAATAAGTGAAAACAAAACACTACTGAACAAAATA TTAATATTATTTATTTTCTAAAAACAAATGTTACGACTTATATATATATA TATACATAATTTATATTTCACTCCATATCGCTCAAAGATAGCTACGATAA AGAGTTCTTTGATGGAAAACAACTAATTACATAATTAGAACAGAAATTGA CACAACATTTAAAAATATTATATTACTCTTTTTTTTTTTTTTGCTAATTA TAAATTATATGAGATAGGCTGAAATTTACTCTATGAAATATGTTTAAATC CTAAAAATACATCCAGAATAGTACGTTAAGTATACGAATCATTTCAGCTA AATTTAGTTCAAATAAATTTGCTTTCCTCAATGAGTCAAAAAAGCATGAA CTTATTTAAAAGAAAAATCAAAATCCGCCCTAATGCTTCGTACTACTCGC ATTGCGTCATGATCTTACTAGCAAAAACGAGGAGGATCAAAGACACTCTG TAGAAGCAATAGTTCATTCTTCCAACTCCACTTTTCTCATCCTCTGGTTT CAAATAACTTGTACGGAAAAGATTGTTTTCAGGAAGACGGGGATCAACAA TCTCGTTAAAATATTTATCATGTCCTTCCTTGATGTCGTCCTCACTATGA ATATGATCATTCCCAAAAATTTCCAAATCATTTTCAATGATGTCATAGTC ATATTCCAAGGACATGGTCACACTAGTTGCTGTTGATAATGACTGAAGAA TGTTTGAATATGGCGTAGTCAAAGAAGAAAGGTTGTGAGTCGTGAGGAAG AGATTCTCTGTGGCCTTTAAGGGTCGTTTGCTGACTTTCTTTCCGATTAC TCTGTAGTCTTCCTTCCATGATTTACGAGACTCTGCTGGGAGGAAAAATA ATATTTTACTCAGATTGTATACTACTTATATCTAGTGTTTTGACTGTCCT TATTTAGAACTGAAGACTGCAGTCCCGTCCAGTTTCATTCTAAGCCTTGT TTTTAGGGTTATCGGAGCCAGAACAGAGTACCATTTAAATTATTTCCGCC AAGTTCATAAAATGCACTTTCATTCATATATTAAACATGCCCTTTTAGTT GAGCATAATACAATCAAAAATACTTTTTGATTGTATTATAAGATAACAAG TAATATTTATAATGATAACGTTTATCTGTACTGTACTGATTCAGGACTGT ACTTGAGAGAGGTCATATAATTTCATTTAAACTTTCTTTTCATACTTGAT TTGCTACCGTATTACGAAAATATTTTTTAATTTGGATGATTACTTCTTAC AGAAGCGCCTGCAAAATTCAAGGTATTGAACCTTAATTTATAATGACATC ATCTTATTCTTCAA
back to top
Add to Basket