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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s80 | supercontig | LSalAtl2s80:906140..911870 - |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011666 >EMLSAP00000011666 ID=EMLSAP00000011666|Name=EMLSAP00000011666|organism=Lepeophtheirus salmonis|type=polypeptide|length=662bp
MLVFGFKDNMKRIHLGATFLLFLFIQFDPGESCLCHVVPNFSCPPPPHCC
ESGQYTFDECGCCLTCAKAELQACGGPNDSSGKCSTDLACLKTCTSCKTI
GFDSKFCVFPFIYEGETFNKCTSKDANEGSVWCATSVNETGHVIEGQWGD
CKEGCPGARRECNDLRFAILVGKCINPDVPGAIPNWFGAPPYRLLDKTKD
LFEAPICKSSSQQRKRKYKNTCRCAEGQDSIEIGNNGLVRGNCTGFDVKK
DNIDTVWCFLENIRDPNDPTXGCYEDTTWSPSDGRFWSAKACGGIPEIGN
DLSTDKSKLPLGPKHPLFMAXLNQXFRRPENVFDAFRTTLPPFTRRPRPS
RRKRPRNRGHRRRTTERPRTTKRTTTTTTXTTTTTTTTTTTTTTTFLPLR
ETFRFTPPIYDDQDLQYDDQEDEDYYLYDDYDYEEEDQEDVMNLPFFNAR
KDSSKLKPFLPTPPPGLPFGNDLRNLNPRLSDDDDGKVRDESLDEDYFTD
PPPRPTKSSATSTTSKSTTNTDPVVPLTTFPTTVSPITEDTLTTTIAQND
DIASSSSRKTLVTKLSGRYTTASPSTTTLAEAITTLISEKSETNNEISTD
STTKPVIENPKTSTISPTTDFYTKTTSLNQFNTTEKLGKVISVSVSFSST
SKEKQESEQKVL back to topmRNA from alignment at LSalAtl2s80:906140..911870- Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011666-707513 ID=EMLSAT00000011666-707513|Name=EMLSAT00000011666|organism=Lepeophtheirus salmonis|type=mRNA|length=5731bp|location=Sequence derived from alignment at LSalAtl2s80:906140..911870- (Lepeophtheirus salmonis)
TATTCCACAGAGCATCTTAGATCAAAGATGTTGGTGTTTGGTTTTAAGGA
TAATATGAAGAGGATTCACCTCGGAGCCACCTTTCTTCTTTTCTTATTCA
TCCAATTTGATCCAGGAGAGAGTTGTCTCTGCCACGTCGTTCCCAATTTC
TCATGTCCTCCACCTCCACATTGCTGTGAAAGCGGTCAATACACCTTTGA
CGAATGTGGATGTTGTCTCACATGTGCAAAAGCGGAACTACAGGCCTGTG
GTGGTCCGAATGATTCCTCTGGAAAATGTTCCACGGATCTCGCATGTCTC
AAAACTTGCAGTAAGGTTCCCTCCTTTTGAATTCTTTGTCCATTTGATTT
ATGGGGTAATATGATGGGTAAAAGCCAAGCCTAGAATTTGTAGGTTAATA
TTCGAGGACTTTATGTCCTCCCAAAAAGGTACTTAATATGCAAAGAAGGG
GTTAGGCTTGGCTCTTGAATGGGTAGTACTTTTTAAGAGTTGTTGTTTTA
TCCACACATACACACCTGAATGAGGACATCCTTGCCGGCCAAAGCAAAAG
AGCAGTTATAATGAGATTAAATGCATACATTATATAATTTGTTGCATTTT
TAAAAATGTTTTTCATTTGTTTTTGTGTTCAGGGAAAAAGGCCACTCCTA
GAGATTATTCTGGTACTCTATCTTTATCAAAGGAATTTACTATTAATAGA
TTCCCATGTCGACGTTAAAAAAATACCTTTTGCATAAGTAATAACCAGGG
GGTAGTCTTATTACGTACACATCCCTTTTTTTCCAGAGGATGCCTTTACT
GAATGGAAACCTCTCCCATTAATCTCTCTAACTTATAAACCTCATACAAT
CACATTCCTAACAAGAAAATTTAGGAATGTAACTATATGAACAACCTCAA
ATAATAATTAATTAACGAAGGTTATTTTGAAGAAGAATTGAGTAGGAGGA
TTTGTAATTACGTCATTCCATGACTATAAAAAAGATGTTACTCAATTGCA
AAAATGGGACTTTGAATTTTTGTGGAAAAGTATTCATAGGGTTGTTAATT
GGGAATCAGAAAAATCAATATTTGATTTATTTTTAATTATTGTCTCTGCA
ACCCATAATTCAAATTTACTTATATGGAGATAAATATCATTATTTTAAGG
TGTGGATACCTATAACAATAATGTAAGAAGATCTGCCTTAATGTTATTCT
CATTTGATCTTGTCTGAATGAGTGTTTGTATCTAATGATTTAGTGTCACC
ACACACTCATGACGTAACGATTTTCCATTTATTTCATATACCTAATTATT
ACTAGCGATCTAAGAATAACGGATAAAGCCTTGATTATTACTCCACCTTT
GAAATAAGTCTTGGAACTGGTTTGCCCTACCCCTTTACTGCAACTTCTTT
TCATATGTAACTTTATGTATCTCATTAAATCCTTTCAGCCTCTTGTAAAA
CCATTGGATTCGATTCCAAGTTCTGCGTATTTCCATTTATTTATGAAGGA
GAGACGTTTAATAAATGTACCTCAAAAGACGCAAATGAAGGCTCTGTGTG
GTGTGCAACATCTGTAAATGAGACTGGACATGTAATTGAGGGACAATGGG
GCGATTGTAAAGAGGGTTGTCCGGGTGCACGTAAGGAATTATAGTTCTTT
CAGAGCTCTTTTTGACTCATACTCCTTACACATTGTCTCTATAGGACGTG
AGTGCAATGATCTAAGATTTGCCATACTTGTTGGGAAATGTATTAACCCT
GATGTTCCGGGAGCCATCCCTAACTGGTTTGGAGCCCCACCCTATCGATT
ATTGGACAAGACCAAGGATTTATTTGAAGCTCCTATTTGCAAATCTTCCT
CCCAACAACGAAAGCGTAAATATAAGAACACGTGTAGATGTGCCGAGGGG
CAGGATTCCATAGAGATCGGAAATAATGGTCTTGTCAGAGGAAATTGCAC
GGGGTAAGCATGACACTTCTTTCCATAAAAATATGAGACTTGCTGAATAC
AAAAGATTATTTTGCTATTTTTTGTGCAACTAAACCAAGCCCATAAGTTA
TAAAGATTTAACAATAGCATATTATAGGATTCCTTTAGTTTCTAAGAGTC
ACACATGGGTAGAGGTGTAGACAAACAAGGATTATTTATTTTTCATACAT
AAAGACTGTATTAGTGCTGTGCCGCGAGATGAATTTTATTACAGTAGTAG
TATTTTCGAGTTTCTAAAAAAAATTCGAGGAATTACGAGCTTTACTCGTT
ACCCGTTATTTCTTGCTCCCTAAAAGACTTTTTTGTAAAAAAAAATCCTA
TTTTTAAATGAATTATTGAAACAATTTAATTAAAAATTTGTGAAGTTCTC
TAGAAGTCTCTATATTTGTAATTGAATATACTATATATTGTACAGATAAA
AGGATCTTAGTATAACAATCGTACTATAGTATAGCAGAACATTTAATAAA
AGGTACTGATGACCAGAGTAAATTGTTTCCGTAACTTATGTTCGACAGAT
GAATCCAAAAATTAGTTTCACTTATTTGGATTAAAGCCATATGCGTTATT
CATCAGTCCATATAGTCAATATTTTACTATAGTCTGGTTATAACTTGTAA
CAAATTATTTTTTTTGGCACTGATGCTGATTAATATGACGTCATATTTTG
CTCATAGCACATCACTAGACTTTATAAAGAAATGGCCTCCATGAAATATG
GTCCNTTATTTCGTTTTATTTTAAAGAGTTTCTGTGATTGCATTACGCAA
CTACCGTGATAAATGGGTAACTTAACTATTTCAATTTTCAAACAAATATC
AATAAACTCCCTCCATTACCAAAAGCAATTAGTACTTCAACTTTGTGCCA
GATGCTAATAATAGCATTGTTATAATTAGACACTAAGGTATGAAATGTTT
TAATTTATGTTTGTCAATAGAACTACCTAATTTAATTTACATTTTTGATA
TTGGACAGGGATAAATTAATGATTTATTTCAATTCTTCTGAACATTTTCA
TCAAGGTAATAAAAAAAATTATATAAGTACATAATTTGACAATTTAACGA
TTTACTTCCATCTAAATACATATTACGTACATGAAATTCAATTATTAGTA
TTTATGTATTAAACACATGATTGATCGTCGGGGTTTACAATAAGTAGGTA
TGTTATATCTTTCTTCCTCCTCATGCCGTGGAGATCTTGCTATTTTAATT
TTGGGATGTGTATTAAACCTTGTAAGATATTCTAAAAAATATCAATGAAT
ATGAATGGTATATTCGGGCAAGTACATAGGTGATGTTGTTAAGAGGTCTT
CGCAACTCTTTCCTAAGAGTAAAGGGTGAGCTTTTGAAGACTTTTTCTTC
AGGTCCTCTCTTAAGTGACTCAAGCTTAATTCAAATAATTTTTACAGCAC
TTATCTTAACCACTTTCCCAGTAAAGGAAGTGAGCTCCATAATTATTTTT
TGGTTAACTTAATAATTAGAAAAATACTGCATATTGGGGCAAATAACAGG
GCCGATGTCATGGAGTTTGTTCACCTTGAAATTTCCATAAAAATCCATAC
AAAAAGGAAGACCATTTTCTTCAAAAAATGTCATTTTAAAAATAGTAAGA
AAATAAAGTCATTAAATGAAATATGAAAACAATTTATTTTTAAATGCTAT
AAAAAGACTTATTTCTTTTCAAAATATAATATAATACTTTTTTCTTTAAA
AAAAAAAATCATTCCAATAAATATTACATAAAATCTTATATGATATTCCT
AAATACTAGTCACAAATGTTCGGACTAAACTTGAACACACCCTTTTGCTC
CTCTGGTCCTATGGTCATGTATTTCTTAGGAGGATTGAACAGTTTATAGA
CATCTTTCCCTAATACAACAATATATTTTTTCTTTAAATGGAACACACCA
TAAATGAAAATGAATTCCTCTCTAGAACATATGTAGTTCTTTCATCTCCG
AATTTATCGAATAAATGTCCAAATAAAAACAAGAGTCTAAAAGCTTTTTT
TTTTCTCTCTCTCTTTCTCCATCTATAGAATTTACGTCTAATTCATCTAA
TCAAACTCCATTATGTTTTCAGATTTGATGTGAAAAAGGATAATATCGAC
ACGGTATGGTGCTTTTTGGAAAACATTCGTGATCCTAATGATCCCACGKC
GGGTTGCTATGAAGATACAACATGGTCACCCTCTGATGGACGATTCTGGT
CAGCAAAAGCATGTGGAGGGATTCCTGAGATTGGAAATGATGTAAAAGCA
AATTAAATTACTTATTTTTAAACATGGATTAGTCTGTTTTTTTTGTATTT
GTTTATTCGTATTGATAAATAGAATTGAAATTYTTTGAAAAARAGAGTTT
AGAAAAAAWAATGRGGGACCTTTAAAAARAMRAAASGGGGGGGGGGGGGG
ATATGGCTTTAAAAAAATAATGATCGTAATAAAAAGGACAATNNNGCTTT
AAAAAATAATGATCGTATAAAAAAGGCAATAGATAGAAAGGAGTTCCTTT
GTGGAAATTGTTTATTTCATAGAAATTAGAAAAATAGATTATAAATAAGT
AAAAAACAAAGTTTACAAAAAATGAATCATAATTACAAAGACATTTAAAA
ATATTATCATGACATTGAATTATCCATTCCATTATGTTTTTCCAGCTCTC
CACGGATAAAAGTAAGCTTCCTCTTGGTCCTAAACACCCTCTATTTATGG
CTGSCTTGAATCAAMCTTTCCGAAGGCCTGAAAACGTATTTGATGCTTTC
AGAACAACACTTCCCCCATTCACACGACGCCCAAGGCCATCTAGGAGAAA
GCGTCCACGTAATAGAGGACATAGAAGACGAACAACAGAGAGACCTCGAA
CAACGAAGAGAACCACAACAACGACGACGMCCACCACTACTACAACGACA
ACAACAACGACAACTACAACCACGACATTTCTCCCACTTCGTGAAACCTT
CCGATTTACCCCACCCATCTATGATGATCAAGATTTGCAGTACGATGATC
AAGAAGACGAGGATTATTACCTCTATGACGACTATGATTACGAGGAAGAG
GATCAAGAGGACGTCATGAATCTTCCTTTCTTCAATGCCCGCAAGGACTC
TTCAAAACTGAAGCCCTTTTTACCCACTCCTCCCCCAGGGCTCCCATTTG
GTAACGATCTACGTAATTTAAATCCACGACTCTCTGATGATGACGACGGT
AAAGTAAGGGATGAGAGTTTGGACGAAGATTATTTCACAGATCCTCCTCC
AAGGCCAACAAAATCCTCTGCCACATCAACTACTTCAAAATCAACTACAA
ATACAGACCCAGTAGTGCCTCTAACAACATTCCCTACAACGGTTTCTCCA
ATAACTGAGGACACCCTCACKACGACGATAGCTCAAAACGATGATATCGC
ATCGTCATCATCACGTAAAACCCTTGTAACGAAACTCTCAGGCAGATACA
CGACGGCGTCYCCTTCCACAACAACATTGGCAGAAGCCATAACCACCCTT
ATTTCAGAGAAATCAGAAACAAACAATGAAATATCAACGGATTCTACGAC
AAAGCCAGTAATAGAAAACCCTAAAACATCCACAATCTCACCAACCACAG
ACTTTTATACGAAAACAACTTCCTTAAATCAATTTAATACAACCGAAAAG
TTAGGAAAAGTGATATCTGTATCAGTTAGTTTCTCATCCACTTCCAAGGA
AAAGCAGGAGTCAGAACAAAAAGTATTGTAA back to top
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