EMLSAT00000012083, EMLSAT00000012083-707930 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012083
Unique NameEMLSAT00000012083-707930
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s864supercontigLSalAtl2s864:105123..106860 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012083 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012083EMLSAG00000012083-694849Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054074EMLSAE00000054074-763002Lepeophtheirus salmonisexon
EMLSAE00000054075EMLSAE00000054075-763003Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772278auto772278Lepeophtheirus salmonispolypeptide
EMLSAP00000012083EMLSAP00000012083Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012083

>EMLSAP00000012083 ID=EMLSAP00000012083|Name=EMLSAP00000012083|organism=Lepeophtheirus salmonis|type=polypeptide|length=189bp
MHQWVSHFLWIYSTDLYYFNMNGFILTGAILASCLILSEATVFVVPAVAX
AATLSIGGGALAGLALLKXAAIKGLVAGAIIGRGKRSAIDLESLLLSASQ
RDFSDCAKKLVCEVNGLSRAEIESEXAMIAALFNADSLDLSKATVEFDLA
AQIGKRVGKEQCAVIYERCPHNRQKLMKIFRDPNLVSQS
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mRNA from alignment at LSalAtl2s864:105123..106860+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012083-707930 ID=EMLSAT00000012083-707930|Name=EMLSAT00000012083|organism=Lepeophtheirus salmonis|type=mRNA|length=1738bp|location=Sequence derived from alignment at LSalAtl2s864:105123..106860+ (Lepeophtheirus salmonis)
GTTGCAACTAGTACAACATTATTTAGATACCATTAGCGCGTCATTGCTGA
GCCTGGATATTGACCTCTCCTCAACCATACGATACAATGCAAACTCAAGG
GGATTTATATCAAGTGAAGAGGAAGGATCCAAATGGTTTAGTTACACAAG
TCCTCTAAGTTGTATTTGCACCCTTCTTTTACTTCATTTGCATTGGGAAC
TCGGCACAAAAAATGTATTCAATACTCTAAATTTGATTATGTTAAAGTTA
ATGGTACTTTAATTTCGGAGAAGCCTGTATATGCTTAAGGGAGGACACCT
ATACACATACTTTGAGATGAATCATTTATCAAAGAGACACATGACTTTTA
TTCAAGAATACCTCCACCCATTTCGGATAGGGAATAAAAGATACAGAATG
TTTGATTTTGTTTTTGCTCAGTAACCCTACCTAAAATGATTTTTTCGAGT
AGCATTAATTGAATAAATTACTTCATATCGGTTATTTCATGTTATCACCT
TAATGTACCTATGTTTGAGTGTCTTTGGTTTTACAATTTTATTTGTCATC
CCATCTTTAAATGATATCAACATCCTTGTGTGGACTGGTTTCAGTCTACG
CATTTTTAATACAAGTAACGGAAAAAGAGTGCGTAAGTTGTGTACGTACA
CTGAAGGGATTCATTAAGTATTTAAAAAAATCATGAAGTATAAATACGGC
TGAGATGCATCAATGGGTATCACACTTTCTTTGGATTTATTCAACTGGTA
AGAACATTAAGAGTTCATCCAAAAAATACTTAATATCATTTGTTTATCTA
ACTATACTAAACTTACTTTTCCAGATCTATACTACTTCAATATGAACGGA
TTTATCTTGACTGGAGCCATTTTGGCTAGCTGCTTGATTCTTTCCGAAGC
AACCGTCTTCGTTGTTCCTGCTGTCGCTKCCGCCGCAACCCTGAGTATTG
GAGGTGGTGCTCTGGCTGGACTCGCTCTCTTGAAGGMTGCTGCCATCAAG
GGGCTTGTTGCTGGAGCAATCATTGGMCGTGGAAAGAGATCTGCCATTGA
CTTGGAATCTCTTCTTTTGTCTGCTTCTCAACGGGACTTTTCTGACTGCG
CCAAGAAATTGGTCTGTGAAGTGAATGGTTTGTCCCGAGCTGAAATTGAA
TCTGAAYAAGCCATGATCGCTGCCTTGTTTAATGCTGATTCCTTGGACCT
CTCCAAGGCTACCGTTGAATTTGATCTTGCTGCTCAAATCGGCAAGCGTG
TAGGAAAGGAACAATGTGCTGTCATCTACGAACGTTGCCCTCATAATAGA
CAAAAGTTGATGAAGATCTTCAGAGATCCCAACTTGGTCAGTCAATCTTA
AATGATTCTTCAAGTTACCTCTTCAACTTTTGTTTAAAAAAGTATGATCC
AAATCCAAAGAAAAACATCTTAATAATCAAAAAATTATATTTTAGTACAG
ATTTTATATAAAGAAATAAATAAAAAAAAAATCTTTTTGACACGAATTCA
AAATATTATTTTATTTAGTAAAAAAAACAAAATGTCTAACCTAATCTTAA
TCTCACTATCTACTAAAAGTTCAGTTCGACTTTATATTTACTCATATTTT
AGTAAATGATAAGGTAGAGGATTAGCTCATCTTCTACGATCAAAGTCATT
CAAAATAGAATTTAATTGTAAATTTACCCTGTGGGCTCCTCACAATGATG
AAATAGATGCGTCGATCACTTTAATACCTTACTCACAA
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