EMLSAT00000012347, EMLSAT00000012347-708194 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012347
Unique NameEMLSAT00000012347-708194
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s901supercontigLSalAtl2s901:31947..33380 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012347 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012347EMLSAG00000012347-695113Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055416EMLSAE00000055416-764344Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769999auto769999Lepeophtheirus salmonispolypeptide
EMLSAP00000012347EMLSAP00000012347Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012347

>EMLSAP00000012347 ID=EMLSAP00000012347|Name=EMLSAP00000012347|organism=Lepeophtheirus salmonis|type=polypeptide|length=477bp
MSMNGRLAFAIXAGAFGSSFQHGYNTGVLNAPQVLITNWLRGCEKNMTAV
TEDGXDVLVCEKDMKSATMIWAIIVSIFCVGGMIGGTVVGTIASRVGRKG
GLMWNNILAILGALLLFFSKMSGSAIVLILGRLVIGINSGINAGLSPMYL
SEISPTSMRGAVGTVYQLIITMSILLAXILGMSSVLGNEAGWPYLLGLTV
FPAILQLVTLPLCPESPKYLLLDVDDEQKALSSLNWLRGKVEVHDEIEEM
KNEKEATKNMKTVSFMEIITNSSLRKPLIVAQMMMLAQQLSGINAAMFYS
TSIFESAGLSLSESQYATLAMGAMNVGMTLVSLVLIERAGRKTLMLIGLF
IMFITTILLMLCLLLSKTVAVLSYVSIIMXIGFVIGFATGPGSIPWFFVT
ELFTQNARGMATSIAVVTNWTANTLVGLGFAPFQYILGPYVFLFFIIVQF
LFIIYVKFQVPETKNKTIEEITAVFKN
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mRNA from alignment at LSalAtl2s901:31947..33380+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012347-708194 ID=EMLSAT00000012347-708194|Name=EMLSAT00000012347|organism=Lepeophtheirus salmonis|type=mRNA|length=1434bp|location=Sequence derived from alignment at LSalAtl2s901:31947..33380+ (Lepeophtheirus salmonis)
ATGTCCATGAATGGAAGATTGGCTTTTGCTATASCAGCCGGTGCATTTGG
ATCTTCTTTTCAACATGGATATAATACCGGAGTTTTGAATGCTCCTCAAG
TTCTTATTACGAATTGGTTGAGAGGATGTGAGAAAAATATGACAGCAGTT
ACAGAGGATGGRAGKGACGTTCTTGTCTGTGAGAAAGATATGAAAAGCGC
TACTATGATCTGGGCTATTATTGTTTCCATATTTTGTGTTGGCGGTATGA
TTGGGGGTACTGTTGTGGGCACTATTGCATCACGTGTTGGAAGAAAGGGG
GGCCTCATGTGGAATAATATTCTTGCTATCCTTGGGGCTTTGCTTCTTTT
CTTTTCCAAAATGTCTGGATCAGCTATTGTACTTATTCTGGGTCGTCTCG
TGATCGGAATTAATTCTGGGATTAATGCTGGATTATCTCCTATGTATCTC
TCAGAAATATCCCCTACCAGTATGCGTGGAGCTGTTGGCACAGTATATCA
ACTCATCATCACCATGTCAATTCTCCTCGCTMAAATATTAGGGATGAGCT
CCGTATTGGGCAATGAAGCCGGTTGGCCCTATCTTCTGGGATTAACTGTT
TTCCCAGCAATATTGCAGCTTGTTACACTTCCTCTTTGCCCTGAATCTCC
CAAATATCTTTTACTCGATGTGGATGACGAGCAAAAGGCTCTGTCTTCCC
TCAATTGGCTTCGAGGCAAGGTTGAAGTGCATGATGAGATTGAGGAAATG
AAAAATGAGAAGGAGGCGACCAAAAATATGAAAACCGTGAGCTTTATGGA
AATCATAACAAACTCATCATTGAGGAAGCCTCTTATTGTAGCCCAAATGA
TGATGTTGGCTCAACAGCTCTCTGGTATCAATGCAGCTATGTTCTACTCC
ACTTCAATCTTTGAATCAGCAGGTTTGAGTTTAAGTGAATCTCAATATGC
TACCCTTGCCATGGGAGCAATGAATGTTGGTATGACATTAGTCTCACTTG
TCCTTATTGAGAGAGCGGGAAGAAAGACACTCATGTTGATTGGACTCTTT
ATCATGTTCATCACAACTATTCTACTCATGCTCTGTCTTTTACTCTCAAA
AACAGTTGCAGTACTCTCCTACGTCTCCATAATTATGGYAATTGGATTTG
TCATTGGCTTTGCGACTGGACCAGGATCCATACCCTGGTTCTTTGTTACT
GAATTATTTACACAAAACGCTCGTGGAATGGCCACATCCATTGCAGTAGT
TACCAACTGGACTGCTAACACACTCGTTGGACTTGGTTTCGCCCCCTTCC
AATACATTCTTGGACCCTATGTATTTCTGTTCTTTATTATCGTTCAATTC
CTATTCATTATCTACGTCAAATTCCAAGTTCCAGAAACGAAAAATAAAAC
CATTGAAGAAATCACTGCTGTATTTAAAAATTAG
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