EMLSAT00000012504, EMLSAT00000012504-708351 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012504
Unique NameEMLSAT00000012504-708351
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s921supercontigLSalAtl2s921:126459..127335 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012504 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012504EMLSAG00000012504-695270Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056171EMLSAE00000056171-765099Lepeophtheirus salmonisexon
EMLSAE00000056172EMLSAE00000056172-765100Lepeophtheirus salmonisexon
EMLSAE00000056173EMLSAE00000056173-765101Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772804auto772804Lepeophtheirus salmonispolypeptide
EMLSAP00000012504EMLSAP00000012504Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012504

>EMLSAP00000012504 ID=EMLSAP00000012504|Name=EMLSAP00000012504|organism=Lepeophtheirus salmonis|type=polypeptide|length=240bp
SSCDAEGKQKFESLEEEGPCSSSGVYLSKISSSSSSYERNSESLFGSNRS
EGAKNSIGIKSKNPIQGRKKRPLLSAKEKNVRRIESNERERLRMHGLNEA
FQGLREVIPHVHHSRKLSKIETLSLAKNYIMALTNVICEMRGEKQPYDLM
PFDEEENEELQQVIEKTDFDGLGGCSKNPCSSFTFLLSSSNHLHPERHMM
SKLSPCLINSVENSEINSLIIPPRGGGTDEEPLEPWIQTV
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mRNA from alignment at LSalAtl2s921:126459..127335-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012504-708351 ID=EMLSAT00000012504-708351|Name=EMLSAT00000012504|organism=Lepeophtheirus salmonis|type=mRNA|length=877bp|location=Sequence derived from alignment at LSalAtl2s921:126459..127335- (Lepeophtheirus salmonis)
TCTAGCTGTGACGCGGAAGGTAAACAAAAATTTGAGTCTCTCGAGGAAGA
GGGACCCTGTAGCAGTTCTGGAGTATATTTGAGCAAAATATCTTCTTCCT
CCTCCTCCTATGAAAGGAATAGCGAATCTTTGTTTGGGAGTAATCGCTCT
GAAGGAGCTAAAAACAGTATTGGGATTAAATCAAAAAATCCTATTCAGGG
ACGAAAAAAGCGGCCTTTACTCTCAGCCAAAGAGAAAAATGTGAGACGGA
TTGAGAGCAATGAGCGGGAACGACTTCGAATGCATGGCTTAAATGAAGCT
TTTCAAGTAAGTGTCATCATATATTATGAACATAGGTATTTTAGGAAAAT
GTAATTTTCAGGGACTGAGAGAGGTTATACCTCATGTACATCACTCAAGG
AAATTATCCAAAATCGAAACGCTTTCCCTTGCCAAAAACTACATCATGGC
TCTTACAAACGTCATATGTAAGATATATATTTTCCCTTTTTACTTATTAC
ATAGATCCTTTTAAGGGATTTTATACTGTTTGCTTTTTATTTTTATTTTC
CCTTTCTCGTCATCAGGTGAAATGAGAGGAGAGAAACAGCCTTATGATTT
GATGCCCTTTGATGAAGAAGAAAATGAGGAACTGCAACAGGTGATAGAGA
AAACAGATTTTGATGGATTAGGAGGTTGTTCAAAAAACCCATGCTCCTCC
TTCACGTTCCTCTTGTCATCATCCAATCATCTGCATCCTGAAAGGCACAT
GATGTCGAAATTATCCCCTTGCCTTATAAATAGTGTAGAAAATAGTGAAA
TTAATTCTCTAATCATACCTCCGCGAGGAGGAGGTACGGATGAGGAGCCT
TTGGAACCATGGATTCAAACTGTATAG
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