EMLSAT00000012878, EMLSAT00000012878-708725 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012878
Unique NameEMLSAT00000012878-708725
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s97supercontigLSalAtl2s97:435595..437812 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012878 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012878EMLSAG00000012878-695644Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057811EMLSAE00000057811-766739Lepeophtheirus salmonisexon
EMLSAE00000057812EMLSAE00000057812-766740Lepeophtheirus salmonisexon
EMLSAE00000057813EMLSAE00000057813-766741Lepeophtheirus salmonisexon
EMLSAE00000057814EMLSAE00000057814-766742Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto777658auto777658Lepeophtheirus salmonispolypeptide
EMLSAP00000012878EMLSAP00000012878Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012878

>EMLSAP00000012878 ID=EMLSAP00000012878|Name=EMLSAP00000012878|organism=Lepeophtheirus salmonis|type=polypeptide|length=484bp
MMKDRRILALVAIFLLLLLTFQFLRSPQKVIHLDIHRSTIKSIREEISSY
HPPPYRIFHLDLKGAPPKISYLREIFPLVREAGGNALLVEYEDMFPYTGM
LSNASALNAFTPSQIKEIVSIAEENELKVIPLIQTFGHMEHVLKLSEFVA
LREIPSYPQSLCPSKWESFQLVVMMIDQLLSLHPNVEYLHIGXDEVYHMG
ICSKCSDRIRRSKTSSLFIDHLLRISSYILTKHPHVKPIVWDDMLRNLPE
NELKVLKNAVEPMVWVYVEDIYHFVGKSTWRKYSNVFPHIWAASAFKGAY
GERLFLPNISRHFKNHLSWRRVLQREGSYYMGRKLQFRGIALTGWXRYDH
FAVLCELLPPSIPSLILNLVLMSFSGPEEVILKKVQSIIKCNQLETSNLE
PESFEDCSFPGVDILLAMLSFQVIKAKVESLDTDSRYKQGWLTSYNVLEW
TEQNVSPLQDKLDNLIRTVRELSYRNTWQRRPFC
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mRNA from alignment at LSalAtl2s97:435595..437812-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012878-708725 ID=EMLSAT00000012878-708725|Name=EMLSAT00000012878|organism=Lepeophtheirus salmonis|type=mRNA|length=2218bp|location=Sequence derived from alignment at LSalAtl2s97:435595..437812- (Lepeophtheirus salmonis)
ATGATGAAAGATCGCCGGATATTGGCCCTTGTGGCCATATTCCTCCTCCT
TCTCCTCACCTTTCAATTTCTTCGTTCTCCTCAAAAAGTGATCCACTTGG
ATATTCACAGATCGACCATCAAAAGTATAAGGGAAGAGATCTCCTCATAT
CATCCTCCACCTTATCGTATTTTTCATTTGGATTTGAAAGGTGCTCCTCC
TAAAATATCATATCTGAGGGAAATATTTCCCCTCGTCCGAGAAGCGGGAG
GAAATGCTCTTCTTGTGGAATATGAAGACATGTTTCCCTACACTGGGATG
CTATCAAATGCTTCTGCACTCAATGCCTTTACTCCATCGCAAATTAAGGA
AATTGTATCCATTGCAGAAGAGAATGAATTGAAAGTAATTCCTTTGATAC
AAACGTTTGGGCATATGGAACATGTTTTGAAACTAAGCGAGTTTGTTGCC
TTAAGAGAAATCCCTTCATATCCTCAGTCACTGTGTCCATCTAAATGGGA
GTCATTTCAGCTTGTAGTGATGATGATTGATCAGGTGAGATGAATGACTT
AACTTCTTTCCTAGGGGTTGAGTTTCCTACTTTATTGAACAGTTCATTTT
GTTTTGATATAATTGGATTGATTGATTTTTACCTCTCTTTCTAAAAAAAT
GTACCTTACTTATTCATACCAATATTTTGATGTAAGCCACATCATTTTTT
GTTCATTGAAAAAAATACAAACAAAACAAAAATCTATTTTAATCCAAAAT
AGCTATTGTCCCTTCATCCTAATGTGGAGTATCTACACATTGGCTGMGAT
GAAGTCTACCACATGGGAATATGCTCTAAGTGCTCTGACAGAATACGAAG
ATCTAAAACTTCCTCACTTTTCATAGATCATCTTCTCCGGATTTCCTCAT
ACATTTTAACAAAACATCCCCATGTCAAGCCCATTGTTTGGGACGACATG
CTCCGAAATCTTCCAGAAAATGAGCTCAAAGTCCTAAAAAATGCTGTTGA
ACCCATGGTATGGGTCTATGTTGAAGATATTTATCACTTTGTGGGGAAAA
GTACTTGGCGTAAGTACTCCAACGTATTTCCCCATATTTGGGCTGCATCT
GCATTCAAGGGGGCTTATGGTGAAAGGTGAGACTGTACATAATGAATTTT
TTTATTCAAATAACTGCATTTTTTTATCATTACATCCAGACTCTTTTTGC
CTAACATAAGTCGACATTTTAAGAACCATTTAAGCTGGAGAAGAGTCCTG
CAAAGGGAAGGATCTTACTACATGGGTCGTAAATTGCAATTTCGTGGCAT
TGCTCTAACAGGATGGTSTCGCTATGACCATTTTGCAGTTCTCTGTGAAC
TTCTTCCTCCTTCGATACCATCACTAATTCTCAATCTCGTTTTAATGAGC
TTCTCTGGACCAGAAGAGGTCATCCTCAAAAAAGTACAAAGTATTATTAA
ATGTAATCAACTAGAGACCTCAAATTTGGAACCAGAGTCCTTTGAGGACT
GCTCATTTCCAGGCGTAGATATATTACTCGCAATGCTTTCCTTTCAAGTT
ATTAAGGCCAAAGTGGAATCCTTGGACACAGACTCACGCTATAAACAAGG
ATGGCTTACGTCATATAATGTAAAGTATAACTTTACAAGTCCTTGGAGAA
TCTCAGAAACAATGAGGAATCATATAAGTTTACCTAATCAAGTTAAAGAC
TTCAAACTCAATATGGAATCTAACCTCAAGAAAATTTATGAGGAGTCCAC
GGTAACTTTTATTCCATGCTTAAAATTGTTTATTTTTAAAACCTATTTGA
AATAATTTAAATTGACCGAGGCAAGTATACCCTAAAAATTAAAGTTGTCA
TAAATTTACCTGTTTTCTCCGCTTTAATCTATTTAAACTTTTTTTCAAGT
CATACATAAAAAACTTATTCAATATCTTGAAGGTAAAATAAAGTTATGGC
CTTAATTTAAAAGCTTTTATCTTCTTTGTTATGATGCTCCTATCAAAATC
TCATTTATCCACAAAAATATATATATGACGTAATTTACCTATGTCTAAAA
TAAGCTTTGAATATGTATATAACTTACTAATCATTATAATTCATTTGTCA
GGTTCTAGAATGGACAGAACAGAATGTTTCACCCCTTCAAGATAAACTAG
ATAACCTCATACGGACTGTTCGCGAACTCTCATATCGTAACACTTGGCAA
AGGAGGCCATTTTGTTAA
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