EMLSAP00000001042, EMLSAP00000001042 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001042
Unique NameEMLSAP00000001042
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length365
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360RRMcoord: 209..281
e-value: 8.6E-24
score: 95.0
coord: 108..197
e-value: 2.2E-4
score: 30.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 210..279
e-value: 6.5E-18
score: 64.0
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 208..285
score: 18.393
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 107..201
score: 12.833
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 82..202
e-value: 1.4E-14
score: 53.6
coord: 203..286
e-value: 9.0E-27
score: 92.9
NoneNo IPR availablePFAMPF13893RRM_5coord: 168..199
e-value: 6.4E-5
score: 22.6
NoneNo IPR availablePANTHERPTHR24011:SF6SUBFAMILY NOT NAMEDcoord: 76..289
NoneNo IPR availablePANTHERPTHR24011FAMILY NOT NAMEDcoord: 76..289
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 100..205
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 205..291

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001042 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001042EMLSAT00000001042-696889Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001042 ID=EMLSAP00000001042|Name=EMLSAP00000001042|organism=Lepeophtheirus salmonis|type=polypeptide|length=365bp
MGKKTKKDVVESPGYTVGALSQLISGNDDLPFKSLFATSNKQKEASLPCP
LTGSTNKNNHDVMTNEEVKEDDEVLEGEPQPVTPSLKRKAQLEDAKEFEM
DPEKEKRTLFIGNLCIKAKKKDLYRLFKPFGSXECVRFRGAARPDPKTLK
KVTVIRKLHHESRDNFLAYIRFKTPEEAESATKLNGTVYNDKTLRIDIAL
KDKVDQKKAVFVGNLDFSVNEEELRSHFLVCGAVSNIRLVRDKSTGIGKG
FGFINFMDSDGVLNALELNHTELKGRKIRVMRSSNRPKTLVNRKITKNSA
MTGSKSKPKVKSFSLYKKVNKNNDTKSFQGVSVTSDEKVTKKRKTKLEKK
NTLIAKKLINHKSTN
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