EMLSAP00000001770, EMLSAP00000001770 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001770
Unique NameEMLSAP00000001770
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length648
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000995Muscarinic acetylcholine receptor familyPRINTSPR00243MUSCARINICRcoord: 135..149
score: 79.42
coord: 587..605
score: 43.71
coord: 116..125
score: 86.09
coord: 618..632
score: 49.86
coord: 85..95
score: 50.99
coord: 58..66
score: 52.66
coord: 172..182
score: 59.29
coord: 37..49
score: 46.49
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 597..623
score: 32.15
coord: 37..61
score: 23.12
coord: 70..91
score: 31.38
coord: 151..172
score: 20.85
coord: 555..579
score: 29.58
coord: 200..223
score: 24.26
coord: 115..137
score: 33.68
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 52..615
e-value: 5.7E-68
score: 228.7
IPR000276G protein-coupled receptor, rhodopsin-likePROSITEPS00237G_PROTEIN_RECEP_F1_1coord: 121..137
NoneNo IPR availableGENE3D1.20.1070.10coord: 534..640
e-value: 6.8E-92
score: 307.2
coord: 29..236
e-value: 6.8E-92
score: 307.2
NoneNo IPR availablePANTHERPTHR24249HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTORcoord: 6..641
NoneNo IPR availablePANTHERPTHR24249:SF71MUSCARINIC ACETYLCHOLINE RECEPTORcoord: 6..641
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 544..638
coord: 23..232
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 599..621
NoneNo IPR availableTMHMMTMhelixcoord: 201..223
NoneNo IPR availableTMHMMTMhelixcoord: 152..174
NoneNo IPR availableTMHMMTMhelixcoord: 109..131
NoneNo IPR availableTMHMMTMhelixcoord: 562..584
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 52..615
score: 39.79

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001770 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001770EMLSAT00000001770-697617Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001770 ID=EMLSAP00000001770|Name=EMLSAP00000001770|organism=Lepeophtheirus salmonis|type=polypeptide|length=648bp
MRTTDLPQAFHNFSSSVSLLENVNVSTVPYTPLQATLIGLAGGLLSLLTT
VGNVMVMISFKMDKQLQTISNYFLFSLAIADVIIGMISMPLFTVFIIQKE
WTLGANICDAWLSVDYLASNASVMNLIVISFDRYFSVTRPLTYRARRTTR
KAALMIFSAWAIXAVVWPPSILAWPYIEGKRTIPPNDCYIQYIYSNEFMS
IVTVMIAFFIPVSIMIGLYVRVWWETVKRQRELVHLQAGKKSHSKKSDSS
EEVGTGTEHSVKGIWKTSQPTAGSSRSRESHQEITYVPTSALRRSTSFTN
QPTKISLRTTTYKGNAGFLLGNSCLDPDRHGGNPGGVDDPSSEGYATPRS
NETPLPTTSKCPSLNYIRDPYANVNRYSRGEANRPKSLITTTSVNKDSNT
XGSSXSPVGTTASGGGDNNNIYTILIRFPPKEVSEKRASLRKSDPSLEDK
VVSASIQMLCDKSSSDFYPRSLPISRKTTGSRSPPPPKRGVSATTSDITK
LPLDSGWVGRQMIKRSQSGGSSYSPHNTLQRLTGGGKKNPGKVKKTNEKK
QXRKAAKTLSAILLAFIVTWTPYSVLTVLNAVLGKETADVYIPPTLWDFA
YYLCYINSTVNPVLYALCNAAFRRTYVRILTCRWRARFRQPFNRYYYG
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