Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 1550..1571 |
None | No IPR available | COILS | Coil | Coil | coord: 561..582 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 1265..1304 e-value: 6.8E-9 score: 34.7 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 883..951 e-value: 3.2E-23 score: 81.1 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 952..1092 e-value: 2.0E-28 score: 98.6 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 848..882 e-value: 2.3E-8 score: 33.3 coord: 253..287 e-value: 1.0E-8 score: 34.4 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 288..362 e-value: 1.8E-22 score: 78.8 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 363..500 e-value: 7.5E-31 score: 106.5 |
None | No IPR available | GENE3D | 2.40.10.10 | | coord: 1305..1496 e-value: 3.5E-41 score: 140.6 |
None | No IPR available | PANTHER | PTHR24268:SF68 | SUBFAMILY NOT NAMED | coord: 163..500 |
None | No IPR available | PANTHER | PTHR24268 | FAMILY NOT NAMED | coord: 163..500 |
None | No IPR available | SIGNALP_GRAM_NEGATIVE | SignalP-noTM | SignalP-noTM | coord: 1..16 score: 0.614 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..18 score: 0.727 |
None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..3 score: 0.505 |
IPR001314 | Peptidase S1A, chymotrypsin-type | PRINTS | PR00722 | CHYMOTRYPSIN | coord: 937..951 score: 30.61 coord: 877..892 score: 50.75 coord: 1038..1050 score: 61.85 |
IPR001254 | Peptidase S1 | SMART | SM00020 | Tryp_SPc | coord: 838..1096 e-value: 6.8E-42 score: 155.2 coord: 1255..1495 e-value: 1.6E-38 score: 144.0 coord: 243..506 e-value: 1.4E-49 score: 180.7 |
IPR001254 | Peptidase S1 | PFAM | PF00089 | Trypsin | coord: 254..500 e-value: 6.2E-41 score: 140.2 coord: 1267..1489 e-value: 2.5E-33 score: 115.4 coord: 849..1092 e-value: 2.2E-38 score: 131.9 |
IPR001254 | Peptidase S1 | PROSITE | PS50240 | TRYPSIN_DOM | coord: 1248..1503 score: 24.737 |
IPR001254 | Peptidase S1 | PROSITE | PS50240 | TRYPSIN_DOM | coord: 831..1112 score: 24.093 |
IPR001254 | Peptidase S1 | PROSITE | PS50240 | TRYPSIN_DOM | coord: 236..514 score: 26.919 |
IPR009003 | Trypsin-like cysteine/serine peptidase domain | SUPERFAMILY | 50494 | Trypsin-like serine proteases | coord: 1254..1497 |
IPR009003 | Trypsin-like cysteine/serine peptidase domain | SUPERFAMILY | 50494 | Trypsin-like serine proteases | coord: 224..508 |
IPR009003 | Trypsin-like cysteine/serine peptidase domain | SUPERFAMILY | 50494 | Trypsin-like serine proteases | coord: 818..1091 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000011018 ID=EMLSAP00000011018|Name=EMLSAP00000011018|organism=Lepeophtheirus salmonis|type=polypeptide|length=1620bp MKIASCFLLLSLGLLANSKPQGYGGGSYPGPVVEADPNLIDDVVGGSGGK GITDGGFIENNDPVEPEPSYGDGGXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXTCEDGEIVTDGGGLIDIRSSFAAVLDPASSKCPGYLEVC CRHPDFSTNSPQTTTPEPVTQPPKPRSYVPECGRRNVGGVGVRIQNDKYK GSTQFGEWPHMCALLEIQGVAYGENINKYVCGASLIAPGVVLTGAHCVDK IPKENIKIRCGEWDTQKEIEPSEHQDRFVEDLRIHPQFNPKNLKNDFALL FTEDDFKLAPHVDTICLPDNLAGIDSYDQNDCFATGWGKDKFGKLGEYQV IMKQVQMDIVNTTECERKLRRTRLGEDFELDKSFVCAGGEKDRDTCKGDG GGPLVCPLHREGNNDGYGVIHETKYVQAGIIAWGIDCGVEGNPGVYANVA DGLCFIHWATQCQTGIPKYFNITGCENWAPQQIESLKYDIHEHQKKLDYI SKDGSGTPSNLRNLNRRIKQAESILKSFEEKHSICIAASGYGDISQVTVE EVGRNEGNVVVDGFGXSNGIHSXQDGSFQDSQILDQDHFVGGYESIYLKM YLNMRNFFFLLTIAPLTYAKPQGYGVVNAEINVAKEDPNLINDIFRGSGG KGFRDSGLNENNSSIEPEPHYGDGGSHVNEVVDTSSEECAYYADQDYKCV PYYTCEDGEIVTXGGGLIDIRSSFAAVLDPASSKCPGYLEVCCRHPNFNT NAPVVTQTTTPEPVTQPPKPRTYKPECGRRNIGGVGVRIQNDKFKGSTQF GEWPHMCAVLKVQAVAYGEDINKYVCGASLIAPGVVLTGAHCVFNTLKES IKIRCGEWDSQNEVEPMIHQDREIKDIRIHPQFDSKNIKNDIALLFMEED FELAPHVDTICLPDNLAGINSYDQIDCFATGWGKDKFGKLGEYQVIMKQV NMDMVNSSECERRLRRTRLGEDFKLDNSFVCAGGEKDRDTCEGDGGGPLV CPLHREGNKNGYGVVQEPIYVQAGIIAWGIDCGLEAKPQGYSTENIEGSS YADLNLIDDIFGGIKPINDVYGGIEEPQPSYGDGGSHIKTTNVFPTTXXX XXXXXXXXXXXXXXXXXXXXXXXXCEDGEIVTDGGGLIDIRSSFAAVLDP ASSKCPGYLEVCCRHPDFSTNSPQTTTPEPVTQPPKPRSYVPECGRRNVG GVGVRIQNDKYKGSTQFGEWPHMCAVLEVQAVAYGDDINKYVCGASLIAP GVVLTGAHCVDEHQDRFVEYVKIHPQFDHKNLMNDFALLFTEEDFKLAPH VDTICLPDNLAGIYSYDQNDCFATGWGKDKYGKHGEYQVIMKQVKMDMVN ATECERRLRRTRLGVDFELDKSFVCAGGEKDRDTCEGDGGGPLVCPLNRG RSNNDFGVVQEPKYVQAGIIAWGIDCGVEGNPGVYANVADGLCFIDWATQ CQTGIPQYYKIKGCENWALQQIQSLKYNIYDYQKRIDYITRNGSGTSFNL RNLHRRIKKSERVLKNFEDEHSICIAVSGYGEINQENIIDISGLGRTDGE GENFLDLTSINNKFIEVSYQ back to top
|