EMLSAP00000001261, EMLSAP00000001261 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000001261
Unique NameEMLSAP00000001261
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length571
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017061DNA polymerase etaPIRSFPIRSF036603DNA_pol_etacoord: 1..569
e-value: 2.4E-113
score: 385.7
IPR017961DNA polymerase, Y-family, little finger domainPFAMPF11799IMS_Ccoord: 282..408
e-value: 1.7E-13
score: 50.4
IPR017961DNA polymerase, Y-family, little finger domainGENE3D3.30.1490.100coord: 292..408
e-value: 6.9E-18
score: 64.7
IPR017961DNA polymerase, Y-family, little finger domainSUPERFAMILY100879Lesion bypass DNA polymerase (Y-family), little finger domaincoord: 290..406
IPR001126DNA-repair protein, UmuC-likePFAMPF00817IMScoord: 9..202
e-value: 4.2E-46
score: 156.3
NoneNo IPR availableGENE3D1.10.150.20coord: 216..286
e-value: 2.6E-8
score: 33.4
NoneNo IPR availableGENE3D3.30.70.270coord: 83..213
e-value: 1.6E-31
score: 108.5
NoneNo IPR availablePANTHERPTHR11076:SF11DNA POLYMERASE ETAcoord: 3..499
NoneNo IPR availablePANTHERPTHR11076DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBERcoord: 3..499
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 3..285
IPR017963DNA-repair protein, UmuC-like, N-terminalPROSITEPS50173UMUCcoord: 6..234
score: 38.866

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000001261 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000001261EMLSAT00000001261-697108Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000001261 ID=EMLSAP00000001261|Name=EMLSAP00000001261|organism=Lepeophtheirus salmonis|type=polypeptide|length=571bp
MTDRIVVLLDMDCFYCQVEAKDDPSLAGVPSAVVQHNDWRGGGIIAVNYE
ARAFGVTRNMRGADAKLKCPEIQLVRVPMIREKADLSKYREAGKAVISAI
TQFDSKFIVERASVDEAYLDITPAVEAMESTPISSQTLPNTNVVGFEKNQ
VHKWLEDLNADDTRLSIGAYIMEQVREAVFEKTGFRCSAGIAHNKILAKI
SCGLHKPNQQTVLPHSSVPILYSKLKLTKLRGLGGKFGDQVLNLLNIETA
MELSTINLKTLHKYFDEKTSLWLYRLGQGLDDEPVNGRELPKSIGCSKNF
RGPQKRLDTMEKVIRWMKSLAEELSDRLIKDKEVNARVPKTLNINVGLEG
SKSSVSRGGAFNTFDVDGITDRGLQLIQKLNNATDKEKYWKPPITLLSLN
ASKFEELNGNGTTSISAFFNSKLNVQTQQSEPTCSDSLKHEQKFIKTQLV
SKDNENVEPCSITSDYTNVDPSVLEMLPADIKQEIESQIKRQKNDTEKET
CPKCGITISPFDLPEHLDFHVAKELQKNYQCVVESIPSSKRKSSDSDSKE
SKTANHSISFFYFYEDSKTVF
back to top
Add to Basket