|
|
Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold2_size2283618 | supercontig | scaffold2_size2283618:500928..502325 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| maker | 2018-02-12 .496401 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1:exon:946 | snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1:exon:946 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1:exon:947 | snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1:exon:947 | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1:cds | snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1:cds | Tigriopus kingsejongensis | exon |
| snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1:cds | snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1:cds-2020033 | Tigriopus kingsejongensis | exon |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of Tk00022 >Tk00022 ID=Tk00022|Name=Tk00022|organism=Tigriopus kingsejongensis|type=polypeptide|length=437bp
MSSASAELFTGSPFGSKITPDDIVDTLGFFDDWEDRYRYVIDLGKQLVAL
PAEARTEDRLIHGCQSHVWVDHYRDEAASKEYFLLDSDAHIVRGLAAIVL
AAMNGRSSDEIAAFDVDAYFEKLDLISHLSPTRGNGLRAMVHRHEMGAGH
PECPERLSAITAALEAAGLSVRLDQREAPQADHETISLAHPAAYVRQVYD
ASPAEGREQLDGDTSMNPYSLEAARRAAGAAVAAVDAVMAGEVRNAFCQT
RPPGHHAEKEQAMGFCLFGNVAIAAKHALEHHGLERVAIVDFDVHHGNGT
EDLVKGDQRILFCSSFMHPHYPGYFGKDVPGMRINSPLNGGADSAAFRQV
IEERWLPALREQKPQLVFISAGFDAHRDDPLGGLALTEDDFHWATRQFMQ
VAAESAEGRVVSVLEGGYNLDALGRSAVAHVQALLGD back to topmRNA from alignment at scaffold2_size2283618:500928..502325+ Legend: polypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1 ID=snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1|Name=snap_masked-scaffold2_size2283618-processed-gene-5.4-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1398bp|location=Sequence derived from alignment at scaffold2_size2283618:500928..502325+ (Tigriopus kingsejongensis)
ATGTCTTCGGCCTCAGCTGAGCTGTTCACCGGCAGCCCTTTCGGCAGCAA
AATCACGCCCGACGATATCGTCGATACACTCGGATTCTTTGACGACTGGG
AAGATCGATACCGTTACGTCATCGATCTTGGCAAGCAGCTAGTCGCGCTA
CCAGCAGAGGCGCGCACCGAGGATCGTCTGATCCACGGTTGTCAAAGCCA
TGTGTGGGTAGATCACTACCGTGACGAGGCGGCATCGAAAGAGTACTTTC
TACTCGATTCCGATGCGCACATTGTTCGTGGATTAGCCGCAATAGTTTTG
GCTGCGATGAACGGGCGCAGCTCAGATGAAATCGCCGCATTTGATGTCGA
TGCCTACTTTGAAAAACTGGACTTGATCTCGCACCTCAGTCCGACACGAG
GCAATGGCTTGCGCGCCATGGTGCATCGTGTAAAAGCACTGGCGGCATCT
TAAAAATACATCGAGGGTTTTATCTTGGCCACCGCACTATATACACACTC
AGTTTGTGAGCAGCACGAGATGGGTGCCGGACATCCCGAGTGCCCTGAAC
GGTTGAGCGCAATCACAGCGGCATTAGAAGCTGCAGGGTTGAGTGTGCGA
CTTGATCAGAGAGAAGCTCCTCAAGCCGATCACGAGACGATCTCGTTGGC
GCACCCAGCGGCTTATGTTCGGCAGGTCTATGATGCGTCGCCGGCCGAAG
GGCGTGAGCAGTTGGACGGCGATACTTCCATGAACCCCTACTCGCTAGAG
GCGGCCCGACGTGCGGCAGGCGCAGCAGTGGCGGCCGTGGATGCGGTAAT
GGCGGGTGAGGTGCGTAATGCCTTTTGCCAGACACGGCCACCAGGGCATC
ACGCTGAAAAAGAGCAGGCCATGGGCTTTTGTTTGTTCGGCAATGTCGCG
ATAGCCGCCAAACATGCCTTGGAGCATCATGGCTTAGAACGCGTAGCGAT
AGTCGACTTTGATGTGCACCACGGCAATGGCACTGAGGATTTGGTCAAGG
GTGATCAGCGCATACTCTTTTGTTCAAGCTTTATGCATCCGCACTATCCT
GGCTACTTCGGCAAAGATGTGCCAGGCATGCGTATCAATTCCCCGTTGAA
TGGTGGTGCGGATAGCGCCGCATTTAGGCAGGTGATTGAAGAGCGCTGGC
TTCCGGCATTACGTGAGCAGAAGCCGCAGTTGGTTTTTATCTCGGCGGGC
TTTGATGCGCACCGAGATGATCCCTTAGGTGGCTTGGCGTTGACAGAAGA
TGATTTCCATTGGGCTACTCGGCAGTTTATGCAGGTCGCGGCGGAAAGCG
CAGAAGGGCGTGTGGTGTCTGTGCTGGAAGGAGGTTACAACCTTGACGCT
CTGGGTCGTAGCGCGGTTGCGCACGTGCAAGCGTTGTTAGGGGATTAG back to top
|
