snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1, snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1
Unique Namesnap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2_size2283618supercontigscaffold2_size2283618:41762..43081 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
choline dehydrogenasesnap_masked-scaffold2_size2283618-processed-gene-0.24Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1:exon:935snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1:exon:935Tigriopus kingsejongensisexon
snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1:cdssnap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1:cdssnap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1:cds-1975822Tigriopus kingsejongensisexon
snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1:cdssnap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1:cds-1975828Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1975819auto1975819Tigriopus kingsejongensispolypeptide
polypeptide-auto1975826auto1975826Tigriopus kingsejongensispolypeptide
polypeptide-auto1975829auto1975829Tigriopus kingsejongensispolypeptide
Tk00015Tk00015Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk00015

>Tk00015 ID=Tk00015|Name=Tk00015|organism=Tigriopus kingsejongensis|type=polypeptide|length=439bp
MVYIRGQFEDYDEWRDMGNEGWGYSDVLPWFKHSENNQGANIEPEYHGNS
GPLTVSDRRYTNALSDLFVEAGCAAGLARNHDFNGASQSGVGRYQVTQRE
GRRCSAAVAYLNPAKGRENLSIITQAHVTRVLLEGEKATGVEYICGGKTH
IAKTNQEVILCAGAIVSPQLLMLSGIGAASELEKVGVTAQIELPGVGKNL
YDHLNLSVLASIKEPTSLYSASKGLGSLVTGAKYLLTQNGIGTSNAAESG
GFYESPLSKGRPDIQLHFIPMLVPPPGIKGVDRHGITLHACNLRPTDVGE
IRLASANPLDAPLIDNRFLQTDGNLAVMREGLKIAREIFATSAFAKLIKD
EHAPGNKITTKEELNQYVRRHAETEYHPVGTCKMGSDSESVVDQQLRVRG
VQGLRVIDASIMPKLISGNTNAPTMMIAEKAASMILAGD
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mRNA from alignment at scaffold2_size2283618:41762..43081-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1 ID=snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1|Name=snap_masked-scaffold2_size2283618-processed-gene-0.24-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1320bp|location=Sequence derived from alignment at scaffold2_size2283618:41762..43081- (Tigriopus kingsejongensis)
ATGGTCTACATTCGCGGCCAATTCGAAGACTATGACGAGTGGCGCGACAT
GGGCAACGAGGGCTGGGGCTACAGCGATGTATTGCCCTGGTTTAAACATT
CTGAGAACAATCAAGGCGCCAATATTGAGCCGGAGTATCACGGCAACTCT
GGCCCTCTCACCGTCAGCGATCGCCGCTACACCAACGCGCTGAGCGATCT
ATTTGTAGAGGCCGGCTGCGCAGCTGGTTTAGCGCGGAATCACGATTTCA
ACGGTGCGTCACAAAGTGGCGTGGGCCGTTATCAAGTGACACAGCGCGAA
GGCCGCCGCTGCAGCGCAGCCGTCGCCTACCTCAACCCAGCAAAGGGCCG
TGAGAATCTATCCATCATCACCCAAGCACATGTCACCCGGGTGCTACTGG
AAGGTGAAAAAGCCACTGGCGTTGAATATATTTGTGGTGGGAAAACACAC
ATAGCCAAGACGAACCAAGAAGTCATTCTCTGTGCTGGCGCCATCGTCTC
CCCTCAACTGCTGATGCTCTCAGGTATCGGCGCAGCCAGTGAACTGGAAA
AAGTGGGCGTCACGGCTCAAATCGAATTACCGGGTGTGGGTAAAAATCTC
TACGATCACCTCAACCTATCTGTCTTAGCGAGTATCAAGGAACCCACTAG
CCTTTACAGCGCCAGTAAAGGTCTGGGATCACTGGTCACGGGGGCCAAAT
ATCTGCTCACGCAGAACGGCATAGGCACCTCCAACGCAGCCGAATCCGGC
GGGTTTTATGAATCTCCGCTGAGTAAGGGGCGCCCTGATATTCAGCTGCA
CTTCATCCCAATGCTGGTGCCGCCTCCAGGTATAAAGGGCGTCGACAGGC
ATGGCATTACGCTACACGCCTGCAACCTTCGCCCAACCGATGTCGGGGAG
ATACGGCTCGCCAGTGCCAATCCACTCGATGCGCCGCTGATAGATAACCG
ATTTCTTCAAACCGATGGCAACCTCGCGGTGATGCGAGAGGGCTTGAAGA
TTGCCAGAGAAATATTCGCGACGAGTGCATTCGCTAAGCTGATCAAAGAC
GAACACGCACCGGGCAACAAGATCACGACTAAAGAAGAGCTAAACCAGTA
TGTTCGCCGCCACGCTGAGACCGAATACCACCCCGTCGGGACTTGTAAAA
TGGGCTCAGACAGCGAGTCAGTAGTTGACCAGCAGCTGCGGGTTCGCGGT
GTTCAAGGTCTGCGGGTGATCGATGCTTCTATCATGCCGAAATTGATTAG
CGGCAATACCAATGCTCCGACCATGATGATCGCAGAAAAGGCAGCCAGTA
TGATTCTGGCCGGCGACTAA
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