snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1, snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1
Unique Namesnap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold286_size222086supercontigscaffold286_size222086:62731..66191 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
chromobox protein homolog 1snap_masked-scaffold286_size222086-processed-gene-0.3Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:exon:325snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:exon:325Tigriopus kingsejongensisexon
snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:exon:326snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:exon:326Tigriopus kingsejongensisexon
snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:exon:327snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:exon:327Tigriopus kingsejongensisexon
snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:cdssnap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:cdssnap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:cds-1983078Tigriopus kingsejongensisexon
snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:cdssnap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1:cds-1983079Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1983080auto1983080Tigriopus kingsejongensispolypeptide
Tk07251Tk07251Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk07251

>Tk07251 ID=Tk07251|Name=Tk07251|organism=Tigriopus kingsejongensis|type=polypeptide|length=175bp
MPVSLLVWTCQGSTTSSSVTSSSTFNWAACSTKGSTGADILRWFTRPPGL
RSVPNANLIHTLILGLEHGIDTFNQLGTEHDIALVDPSRLLWSGKKKKGD
DDRPRGFDRGLDPERIIGATDSSGELMFLIKWKGSDEADLVAAREANVKC
PQTVIKFYEERLTWHTSSQDDDNDD
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mRNA from alignment at scaffold286_size222086:62731..66191+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1 ID=snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1|Name=snap_masked-scaffold286_size222086-processed-gene-0.3-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3461bp|location=Sequence derived from alignment at scaffold286_size222086:62731..66191+ (Tigriopus kingsejongensis)
ATGCCGGTGTCACTCTTGGTCTGGACTTGCCAAGGATCCACCACGTCGTC
CTCAGTCACCTCATCCTCCACCTTCAATTGGGCCGCTTGCTCGACCAAGG
GATCCACTGGAGCCGACATCCTACGATGGTTCACTCGTCCGCCTGGGTTG
AGATCCGTGCCAAATGCCAATCTTATCCACACGTTGATTTTGGGCCTGGA
ACATGGGATTGACACGTTCAGTGTGACTGATTGTGCAGTCAAAGCAGTAC
AGAAAGTTCGGCGAGTCACGAGCGATATGAACCTATGTGTCGTCCAGTCT
GCTAAGTATGAATGCTCACCATAAGTGTTAGGTATATAATGAATCCAATT
GGAGGTATTTGATAACTTTGATCACATGGTTGCCACTTTTATACTGTTAC
AGTTAGACATTCGGCTTTAGCCCCCTCACTGTGGCGTTTGCTTTTGTATT
TACTGTTTGTAGGCCGGTTTGTTCACAGGTTTACGGTGGGGAACTTTGTT
TTTGATTATATTCATCCATTATGCTCTTATCATCATTGGGGCCAAATATT
TGGATCTTGGTCACTTTATAAAAGTTTCATGTGTCATCAGAAAAACAGTG
TGACTACATGATGCAATTTCAGGGTGAGAACAATGTTCGGATCATTCGGT
TATCCATTATTTTAATATCCTCTCCAATCTCCATGATAAGTCATAGTTGG
ATCAACCTCAGTTCAAATTGAACAAAAAACGCCCCGGATTTCCAGCGGGC
AAATCATATATTCCTTGTAAACTGGCATCGTTTATCCTCACGGTTGCATA
AAGTAGTATGATAGTATGATAGTAGTATAGTATTTATGATCTGTTCAGCT
ATTTTGATCGATCATTGAGCTGCTTTACGAGGGTTGTCCTACAACCAATT
GAACAGAGATCTCAATGAGTATATTTGAGGCAACATGGAGATAATGGCAG
AGTTTGAAAAACCAACCACATCGGCCGCGAACGATGGTCAAATGTGACTG
GACAGAAACAAATGCTAATTCTCATCTCCTCCTTTGGTCAAGATCTTCGA
GGGCTGGGCCACGAGCCCTTGAACATTTTCATTGTATCTCCCAGATCAGC
TGGGCACGGAGCACGACATAGCCCTTGTGGATCCCTCGAGATTGTTGTGG
AGCGGGTAAGTACTTGATAGGATATTATGTGTCTTCCTATCAAGGACTTG
GTAGAGAGACCTGTCTTTTATGTGGCTGATATCTTGACAATATTTAGCAA
TTTGATCTCACGATCTAACACGCCATGCATACCCATGCCTAAAGTGTTAC
TTATGTTAGTCCAACCTAGAATCACTTACCAGGGTCACTAGTCCAACCGA
TATTTCTATCGCAAAATGCAAGTCAATCGATTTTTAAGCGAAATGGTCCA
AACAAAATGTTCATTGACCAAAATGTCATGAGCCTGATCATAGAAATGAC
CGAGTTTTCGTCGCAATTGCGTGATAATTCGATATTGTTGACCCAATATC
GCTGAATTGGGATCGATATTATTTAAGTTTCTGTGGTTGGTTGACCAATT
TGTCGATTGATAACTACTCATAATCATACACCCAAAATGTTGAGATCATG
AATTGTTACGAACCAGTGGCTAACAAATACAATTCAGTTAGTGTTCAGTC
CTTATCCGCTGGCATTAGATAGCCCAATTGAGAGTGCCGACGGTGAAATT
AGGGCACATGAGCGTTGACCTATAAATGTTTGGCATATTCCAGCTCCCAC
GTAAGGAATGTGTTGGCATGTAAAAGTCTCTGACAGATCTAGGCAATCCC
CACCATAAACCCATAAACGAGCCCCCAAATCTCAGGCATTCCAGCCGGAC
GATCGATGGCATCGTCAGGCACAATCCTGGCAAGTCGAGGGAATGCATTC
TGGCGTGAAGCCACGCCACAGGGTCACGAATCAAGCCGGATGAGTGTGCT
GTAGGGCGCCGCCACCTCTGGAACGCCCTAAGCTCAAACGCCCAGCTTGC
CTGGGTTCGCTTCCCGCCTCAGGAAAGCCACAACCACTTTTACGGTTGGC
AATTCACTCCTTCGCCTCCTCTGCCTGCATTCTAGAGTAGCCTCAAGCCA
ACCACCTGGTGGAAAACTAGGGTGACTATTCTGGAATGGGATCGAGGCCG
TCTGCTCGACCCGCCCCCTCTCATAACTGTACAAATTGGGTTTCTCCAAG
TTGAGTTCGTGTAGAATTTAGACGAATGGAACTACTAGGCACTGTCCATC
GTCCTCAGTAATCAGACCTGATGTTATTTGTGGTGCCTGCTTGATGACAG
GCTACGGCACTCCGACTCTACCAGTGTGTCTTGTCAATGGTGAAAGAAAA
AGAACACAATTAGTTCAGCTATAGCGATGACATACGATCGAGGCTTCTGG
TGCGACAAATCTGTAGGTCCTTAATATCATGAATCCCCAACCGCCATGGC
ATTTTTTCAGCACTTGCCGGAGTTTTCGCCACCCTCATCCCATCTGCCGG
TAACAAATGCGCTCGTTGTCGACCGCTGTCTGTGTTCTACTTCTTTCTTC
TTGAAAGGAAGAATTTTCGACCAATCAACACATTGGACGCCATTTCTGAG
TTTCCCGCAAGTGCAGCCGCATTGGGGCCTCGTTGTTCTCGTCGTTGAAT
TGACCGTGGTAAGTACACAGGTCTGGGGTGGAATAAGCTCTCGCCGGGGG
GGTCCGGAATGAGGCGCGTTGAAGAGCGGGTAGAGTTGGGGAAAGCAGTC
GCCGTGAAAAGTGATCGCCGGCCAAAGCTCTAGGTCAGGTCGGGGTATCG
TCGTGACGCTGGTAGTGTGAGCGATGAGCCAGATATCCTCGGATTCTGCA
TGCCTGCCTTCTCTGCCTGGTCGGTTTCTACTTCCTCCTCTTAATGCTCA
ATCGAACCTTTCAGCCCGTGTCGAACTCGCCGCACCTTCGTCATGCCCCG
TGAAAATGACGCCGCCGTAGGAGCGGAGGAAGAGGAGGAGGAGTACCAGG
TGGAGAAGGTCATCGACAAGCGGATTGTCAAGAACGGCAAGATCGAGTAT
CTGCTCAAATGGAAGGGCTACGGTGACGAGGACAACACGTGGGAGCCGAA
GGAGAACCTGGACTGCGAGGACCTCATTGAGACCTTCGAAAAGGCCCGCC
GCGAGAAGGCGGGCAAGCGGAAAGAGGAGAAACGCAAGTCAACCACCGTT
GGGCCCTCTGAAAGCAAGAAGAAGAAGGGCGATGACGATCGACCTCGGGG
CTTTGACCGTGGGCTGGATCCCGAGCGCATCATCGGGGCCACCGACTCCA
GCGGCGAGCTCATGTTCCTCATCAAATGGAAGGGCAGCGACGAGGCGGAT
CTCGTGGCCGCCCGTGAGGCCAACGTCAAATGCCCGCAAACCGTCATCAA
GTTCTACGAAGAGCGACTCACATGGCACACGTCTAGCCAAGACGACGACA
ACGACGATTAG
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