maker-scaffold781_size98004-snap-gene-0.17-mRNA-1, maker-scaffold781_size98004-snap-gene-0.17-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1
Unique Name	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold781_size98004	supercontig	scaffold781_size98004:25923..38495 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
hypothetical protein CAPTEDRAFT_149451	maker-scaffold781_size98004-snap-gene-0.17	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:930	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:930	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:931	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:931	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:932	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:932	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:933	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:933	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:934	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:934	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:935	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:935	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:936	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:exon:936	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds-1968378	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds-1968379	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds-1968380	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds-1968381	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds-1968382	Tigriopus kingsejongensis	exon
maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds	maker-scaffold781_size98004-snap-gene-0.17-mRNA-1:cds-1968383	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1968384	auto1968384	Tigriopus kingsejongensis	polypeptide
Tk03284	Tk03284	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold781_size98004:25923..38495-

protein sequence of Tk03284

>Tk03284 ID=Tk03284|Name=Tk03284|organism=Tigriopus kingsejongensis|type=polypeptide|length=477bp
LETIMSGDWKSLLLSQVVCIPFLRRPGQSLSDPSYYGVEQAQNLKLLVTN
DQFIGAWYMVPYTYDNDEVEDPGEIAYQEDFSARRLGADDKVILYLHGNA
ETRSQFHRKELYKVLQKSGYHILAIDYRGYGDSSQLYPNEETLSQDALVA
FQWLKSRSDVGTKVIVLGHSLGTGVAIKMAQRLHDMNEERCPQGYVLCAP
FNNMLEEVKTFKVSKMAAMLINIPQTLQDAKVEFESDKWIRNIRVPITIL
HSIDDRIVPIHLGERLFEGAKDVCDIKFVDYDPDSHQIGHDYFYRDPRGD
PPTSHPLHSDQEAPEAPSHRLQRRISPSDLIGLVAHEGPRPTATSSPSKL
GGTMRQGDKGSTAPGQPQNGNPALVRAPSTPGGAASVPRDESAQPSHSGT
PIGASTSEYRSHLTIGHQTMSELFPKYVDFAYPTHSFNDGVQGKSIGQMN
QSLIAFEKLGLHANLAANKSGKVHFIA

mRNA from alignment at scaffold781_size98004:25923..38495-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold781_size98004-snap-gene-0.17-mRNA-1 ID=maker-scaffold781_size98004-snap-gene-0.17-mRNA-1|Name=maker-scaffold781_size98004-snap-gene-0.17-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=12573bp|location=Sequence derived from alignment at scaffold781_size98004:25923..38495- (Tigriopus kingsejongensis)
AAACTCTCAGCCCAGGTGCCGATGCTGATTTCTGGGTAATGCCAATTGCC
AACTGGTCTCTGAAAATTGTTCGTGTGGCGTATTGGCTTGGTCATATTAT
GCGCCATTGATACTGAACAAGCTTGACTCTTCTTGGAAACCATCATGAGT
GGCGATTGGAAGTCACTTTTGCTCTCCCAAGTGGTGTGCATCCCCTTCCT
GAGGCGTCCAGGTCAAAGTCTGAGTGATCCCAGCTACTATGGCGTGGAAC
AGGCACAAAACTTGAAGCTCTTGGTAACCAATGATCAGTTCATTGGAGCC
TGGTACATGGTGCCGTACACCTACGACAATGATGAAGTGGAGGATCCTGG
AGAAATTGCTTATCAAGAGGTGAGCACAATCGATCTTCCAATCCAACCAG
CCAAGACCATCAATAGTTGATTGGTAATGCTTGGTTTTGCGAGGATGGCC
GCAATTGAGCCTCTCTTATGTTCCTACCTTGAGAAGGCAAGTTGAGCACT
GGTTGAAACTTTTTTCCAGGATTTTAGTGCCCGAAGGTTGGGCGCAGATG
ACAAGGTCATACTATATTTGCACGGCAATGCCGAAACTCGAAGTCAGTTC
CACAGGAAAGAGTTGTACAAAGTAAGTGGTCAAGGGGTTTGGCTTACCTT
CTTGGACTCTCAAGGCAATGCCACTGCGTTATAGGTCCTCCAAAAAAGTG
GTTACCACATTCTGGCTATCGACTACCGAGGCTATGGCGATTCTAGCCAG
CTCTATCCGAATGAAGAAACCCTGTCTCAAGATGCATTAGTGGCCTTCCA
ATGGCTCAAATCTCGCTCGGACGTAGGGACCAAAGTCATCGTGTTGGGCC
ATTCCCTGGGAACAGGTGTGGCGATAAAAATGGCCCAAAGGCTTCATGAC
ATGAATGAAGGTGCGGATTACAAATCATGCTTATAGCTATTCCCGCATTA
CTCATATGACTGGTCTTTTAGAGCGATGCCCTCAGGGTTATGTGCTGTGT
GCTCCGTTCAATAATATGCTGGAAGAGGTCAAGACCTTTAAGGTCAGCAA
AATGGCTGCGATGTTGATCAACATCCCTCAAACGCTCCAAGACGCCAAAG
TTGAGTTTGAAAGCGACAAGTGGATCCGAAACATTCGAGTTCCCATCACG
ATCCTGCACTCAATTGATGACCGAATTGTGCCCATACATTTAGGTAAATG
GCTCCTGTGTCCAATGTTTGATTCATTGATACTAACACTTTTCCTGGTCT
TCTCAGGTGAACGCCTCTTTGAAGGCGCCAAAGATGTTTGTGACATCAAA
TTTGTGGACTACGATCCGGATAGCCACCAAATCGGCCACGACTACTTCTA
CCGCGATCCAAGTCTCCCTAGCAAACTAGATGAGCTCATTGCCAGAATGC
ATTAAAGATTTTGAGCTAACTGTTTTTGCGTACAGTTCAGAAACATGTAG
CAAAAGCTGTGTTTTCGGCGGGAGGAGTATATCTTTTTATTATTCTTTCA
GGTGGAGGGTTAGCCATTATTAGAGCTGGCCCGTAACAATCAGATATATT
TTATGTGCATTCCGCTGAAACATGCCAGAAATATCATTTTTAACATTAAG
TGTTCTTCTGTTTGACCCGGGTTTCAAGAAACCAGGGGACTCAAACTGGG
AAATGGCGCGATACCTTTTCCGAGTACATGGTATTGGTGTATTTTTGCCG
ATGTGCAGTAAAACACAATTTAGGATCGTGTTTGAAGACTATTCATTGCA
GCGCTTGTTTTAACACCTCAAGACAGAAAGGAATATTCACGTTTGGGGGA
ATTTGCAGCTTGTTTGGGATAATCTGGTGCTCTGCAAGGTTTAGGCTGGT
CGAATTGGGTCCGAGTTTGACGTAAAATCCTGAGGCAGGCTTCGATGGTG
TCCTTTGATAGAGTTAAAATATACTTGAGGCTTCTTCATTAAGAGCCCCT
TGACTAAGATCTCATGAAGAAAGACCAAGATAGACAGGATGTACCCCAAG
GCCAACAGAATGTAGACCGAAAACTGATGGTCCAGCGATATTGGCTCCAA
ACGGATCACGGACTTGGGTTCCAGGAGTTTGTACTTCCGCAAGAACTTGT
CCACCAGGCCGCAATCCATGGCCCAACCCATCACTTGGGTCACTCGCGGA
CCCCAGGGGGCATATTTAGGAAGTACAAAGTTCAATTGCCAATCATATCC
GGCGGATTCCTTGGATAAATGCATACCTCGAGCGTCATTGGCGTACAATT
TGATGGACGCCGTTTCGACTCCTAAAACAAAACAAAGTCGCAATGAGATA
GTTAATCGCTCAAGTGGAACAAAATACTTTGGGGGCGACATTACCAACCA
CAATGTAAGAAGCTCCGGTTTCCAATGCGTCATCGATGACAATCTGAGGG
GTTTTGCCTCCACTCTTGAAGTAGTTATAAATGTTACCTTGTCGCTTGGA
CATGAAAGCAACATTTTGAACGACTTTCGGCAGCAAACTGAAGTACTTGT
TATCAGGTCTGGAAATGTGAAAAAAACGTCCTGAAACCAGTTGAACATCT
AAAACTACGCACTCAATCACTTGTGAACAGACACATTTCAGACCAGGATA
TGAATGAAAAGTAAAGAAAAGCTCACTGAACAAAGTTTGGGAATTGCTGC
CATGTACTGTAGAGGCTTTTTGTGGTTGGAAACTCCCAATACAAATTCAA
ATTAGAAAATGTGTAGAGCTGACTCTTCAAATCTCATTGCCAACGATCTG
AGTGTAAAATATCGATCTTAGCATCTACGAGCTCTACATGATGAGTCAAA
TACCGAGCAATGCTCAACAAATGTGGCAAGTAGATGTTGGCTCCTCTGTC
CAAGACATTCTGGGGCTCATTTATAGGCGTCTCGTGCTCTGCAGCCGCCA
ACGCGGCCAATAACATAGAAGTGTAGAAGAGACAGATGAACATGGCGTAG
AAGTAGTACAATCCAGTCAATGCATGACCTGCAAAATAAAGACATGCATT
GTCAATATTTCATTCATGCTGGTGGGATGGGGACACAGCTTCGCAAGTTC
ATTTTGCCATCATGTCGCAAAAAGAGCCTTTCAAAGCAAAGAGGCTACAT
GCATGAATTACACAGAATAACATAATTAAAAGGGAAGTACCGGTATTTGT
GAGGATGACGGTGAACTGCTATTTCCTGGTCGAATAAGGCATTGCTACAA
TGAAGTCATGTTTTCGATCCCACAAATGCTTCCCCTCCTAGTTCTTGCAC
ACTGACTCCCTGCCATTGAATAGACTCTTTGATTAATTAGGCTCTCGACG
TAGGTCACAGGGGTGAATGAGTATCTTAATAAAAGCCCAGCCGATCCAGC
AAAGTTTTTAAATGTTAGTTGCCTGAGTTCAAAATTTGCTGACAGTAATG
TAGATTTAAAAATAGAGCCCCGAAACAGCTTGGTGTGTTCATGCCCCACC
TGCCCAAAGACTTGGTTTAGGATCTGACCGATGTTTGCTTGTCTGATTTT
GGAACCAATACCCGATGATGGACCATGGCACCCCGACACTATGGAGGAGT
AGTGTTGGCTACTACACCAGACTAAGTACTGGATCCGCAATCCAGATCAA
TATTTTTCCAAGCATATTCTGGACCCAAGTCGGAAGGGTCTGGGCCAGTT
GATCCCCTGGATCACTGGTCATTGTCACCTGAACTACTTTAACGCAGTCA
AATCAGGGCCAGTGGCTGACCAAAGTTGTCGATGTCCCTTTTGCGGAAAT
ACGGAGGAATCGCCGTCATCTAGCGACAGTTTGCCCTGGAACCTGCTGTC
TGTGGGCTAGTAGTCACAACGGCACCAATATATTCCTGGAATGGAACCCC
AAGGTAGTATTGCCCCTTCTGGGTCAAACCATGACTATCTTGAACTCGGT
CCAAGGATTAGAATACATTTTCAGAAAGCCCTAAGGTCGAATATGTCTCT
TTGGAGATTTCTAACTGGGAAATGATTGTACTATATGTACTGATCATTCC
TAGGGCCTTCCAGACAAACAAGATGGACCCTGGCTTAGGTGGACATTAGT
TCGGTGAAGCAGTGGAAGTTGCTACTTGAAACATGCACAAATAAGTGATA
CAACAGACTCTTGCAACCTCTCCGCAACGTGGTAGACGTGTCAACCTACG
CTCCGGATACAGTGAACTTTAACGCGGCCGCCCTCCCTCAGGAGGCGACC
CCCCCACCTCGCACCCCCTCCACAGTGACCAGGAGGCCCCCGAGGCCCCT
TCTCACCGCCTCCAACGCCGAATTAGCCCCTCGGACCTGATCGGCCTCGT
CGCCCACGAGGGCCCGCGCCCGACCGCGACGTCGTCGCCGTCCAAGCTCG
GAGGGACGATGCGGCAAGGAGACAAGGGGTCGACCGCCCCGGGGCAACCC
CAGAACGGCAACCCGGCCCTTGTCAGGGCCCCCTCCACCCCAGGAGGAGC
GGCTTCGGTACCGCGGGATGAGTCGGCTCAGCCTTCCCATTCCGGAACAC
CGATCGGGGCCTCTGTGGGGACGCAGTCCCTCCAGNNNNNNNNNNNNNNN
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NNNNNNNNNNNNTACAGGAGAAGTTTGATGATCACTGGGCCTCTCGATGG
CAAGCGAGGACCGACTGCAGACAAACCAAACACTGGTTTCCTGCTCCCAA
CAAACCGAAATCTCAGGCCTTGATGCACTTAGACCGGTTACACTTGAATG
TTATGGTACAACTAGTCACCGGTCACAACTTCCTAAATCGCCACTCTTCT
CTGATAAACCCAGAGGAAAACGATGAATGCAGGCTGTGCCTGGAGGACGA
AGAGTCCTCCTTTCACATCATGGCGGAGTGCCCGGCTTTGGCCAGAGCAC
GCCACACTGTGTTTGGACTTCATGTTCAGACGCTACCCCTCGTATGGTCG
GTCCCACAGGTGTTCAGCTTCCTTCGGGAAGCAAATATTGAACATCTGTT
CGACCAGAGGGGAGATTAAGGTGGAGAGTCCGGGAGAAGGCATAATGGTC
CGGAAACGGACCGGCCGTGGGGGCGGTACAGATCTTGCGTCTGTCCCGTC
CCCCTCTCTTTCACAACAACAACAACAAGTGATACAACAGTCTCTGCTAT
GCTTGTGGGACTAATTAAAGACCCTGATTCTAGCCTACTCTCAAACTGAT
CCATTCCAGAATGGAGAATGGTAATTGTTTTAAGGGTGTTTTTGATCGTT
TGGAAGGCGCCGGGCATTTCAGCCCTGCTAGGGAAATCTGCGAGGAGACA
AAGCCAACATGAATTGACAAATTAAGCATGAATTATTACCTTACCCTCGA
GGAATGACCACAAGCTTGCCCTCTTTAATCACGCAACAATAGCTGTGGTT
TAACGCCACTAAATTGCCGGAACTCGGCAAGCCCGGGGATCGAACCAACG
ACCCTCGGATACTAGTGATAAATGACTTATTATGCCACTCCACCACTGCG
CTAAGTTGCGATTAAACGGTATATAAGTGGTGCAACAACTTCCTACAAAC
TCTTTCCTTGCCTTAGGAAAACTATAAAACATATTTTTTTCATTGTGCTT
GTTTTAAGAACAGATATAGGCCAAATCAAGGCCAAATAGGTATATTGGAC
CATTGGTTCTAGTGGAGGGATCTTTGAACGGATCAATCACCGACAAAGCC
CTGCTAAGACTGAATGTCCGGGTTGCTCGGACAGGCTAGGGAATGGACAA
ATGAGCTCTCTTACCTGTGGTGCCGGCTGGGAACCAGTTGATCTTCTCCG
GCTCAGTAAATGATATGTTCATCCGGATGAAGAAGCGGGAAAAGGTAGTG
TCAGAGCAATCCAGATGCTTGGCAAAAGTCTCCCATTGATAAGCTCGACC
GATCCAGTAAAAGATCAAAGAGCAACCAAAGTTGACCAAGACCAGACTGA
TCCACACCGATGGAGGAAATACCTTGATCAGGTTTTGATAATTAGGCAAA
GGCTGAGGAACTCGACTAGCGTAGTAAAGTTTGGATTGGTGAGTCGGATA
GGCGAAGTCGACATACTTGGGGAAGAGTTCACTCATGGTTTGATGGCCAA
TGGTCAAGTGACTCCTGTACTCGGAAGTCTGTAAGAAAAACAAAAGTGAT
GAGTGCACTGGGAATGCCACCTTTGTGATGGCTTTGGATTCTTCTGGAGG
TGTTTTCAACGATCGATTGGAGAGGTCTAAGCTAAGAGGTTCTCGTTAGG
GACCTGATTTGTTCTGTGATTGTGCTTGGCTTTACTTCACCTTCATTTTT
ACTCCTGTAGATCAGTGCTCTGTTGGTATTAACTTAAAATCATATGCCCC
TCAACTGCTTCGATGCTTTTAGTTTATACATTTCCCACAAAAATGAAAAT
ACTTTTTTTGTCCAAAGTCAAGGACATTAAAAAATAGAGCTTTCCTCTAT
ATTGGAATGTCTTCTTGCCTAGATTGAAGGACATGATAAAATTATTAACT
GCGAGTTCTTATTCATAAAAAAACTGGTTTTTTTCAAATAAAGGTACTGA
AATGAAACTGAAAATCATGCAATTATCGGAAGCTTTTTTGTGAACTATTT
CCCCCATCGTTGCTGTAAGCTAGATTTAGAAAAATGGCACCTTTTTTAGT
TGAAATTTATTGCAATTCACAAAAGTAAAGTTTAACTTTTGAGTTGAAAA
ACGACAGAAACAAAACTTGTTTTAATCTAACTTGGCTCATCCATCCGTTC
CTTGCTGGGCAAAAATGTATTTATTCAGTAAAATTCAGCCTATGACCGAG
CCCTGCAAGTTGAGAAAGTAAAAAACACGCTGATTGTGCAGTTTTGGGGA
AAATATTGATACCCAAACCGATATTTTTATAGCTTTTTGTGTCGAAGTCA
AAATTGAGATACTTCACGGCTCAATTAATCAGACTTGGTTTTCTTTGATT
TCTCAACCAATAAATATACGAATTAAATTGAGGAACATGAAATCAATCCT
TCGACTAAACCAAGGATCTCTGTAGAGAAGGTCCTTGAACAAACTAATTA
AGCAACAAAAAATGTATGGGCTGACATTCTGGTCTAAAATCAGTTTGACC
AAATGTTATGTTTTACTGGATTCAGATCATTTCAGTCTGGAGTATAACTC
TCCTTTGAGATATTGACCATGGGTTGGTAAATTTGTCATGAATTGTTACC
CTACACTCGAGGTGTCCCCACGTTTCAGAGGGAAAAATGATAGAGAATTG
TCATCCAACCTACGTTATCTTGACATCTTGTAACATTAAATATCCTTGAT
CCAACTCACAGCTTTAATGATGGTGTTCAAGGAAAGTCCATTGGGCAAAT
GAATCAGAGTTTGATTGCCTTCGAAAAACTTGGGCTTCACGCCAATCTTG
CCGCAAATAAGTCGGGCAAAGTCCACTTCATAGCCCGTGGGATCAATTTG
GCCAGCTGGAGGAGGCATCACACAAGGGTCTACCTTGCGATACAGGATCA
ACCAGTCGCTATGGATCCCATTACAGGTCTGATGGATCTTTTCCACTAGA
TTATGTTCCAAGCCCGAATCCAGAGTCCAAGACCCAAAGTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCATTCCCAGTGCACTCATCACTTTTGTTTTT
CTTACAGACTTCCGAGTACAGGAGTCACTTGACCATTGGCCATCAAACCA
TGAGTGAACTCTTCCCCAAGTATGTCGACTTCGCCTATCCGACTCACAGC
TTTAATGATGGTGTTCAAGGAAAGTCCATTGGGCAAATGAATCAGAGTTT
GATTGCCTTCGAAAAACTTGGGCTTCACGCCAATCTTGCCGCAAATAAGT
CGGGCAAAGTCCACTTCATAGCC

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