maker-scaffold42_size484952-snap-gene-3.23-mRNA-1, maker-scaffold42_size484952-snap-gene-3.23-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold42_size484952-snap-gene-3.23-mRNA-1
Unique Name	maker-scaffold42_size484952-snap-gene-3.23-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold42_size484952	supercontig	scaffold42_size484952:434648..440360 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
60s ribosomal protein l4	maker-scaffold42_size484952-snap-gene-3.23	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2019362	auto2019362	Tigriopus kingsejongensis	polypeptide
Tk06364	Tk06364	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold42_size484952:434648..440360+

protein sequence of Tk06364

>Tk06364 ID=Tk06364|Name=Tk06364|organism=Tigriopus kingsejongensis|type=polypeptide|length=649bp
GCAAHVAANSRIAEVSLSPSVRLTFPFHPPSLASERRKSSGSRTLVMSLS
AARPVITIYGEKNEPSGSTCSLPAVYQAPIRPDIVSMIHHEIAKNHRQAY
AVSQDAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAYGNMCRGGHMF
APTKTWRRWHRKVNVAQKRYAMCSAIAATGIPALVMAKGHRIENIPEVPL
VVSDKIQSYTKTKEAVILLRRLKAWTDIEQVYKTKRMRAGKGKMRNRRRI
QKLGPLVVYGSDQSLSAARPVITIYGEKNEPSGSTCSLPAVYQAPIRPDI
VSMIHHEIAKNHRQAYAVSQDAGHQTSAESWGTGRAVARIPRVRGGGTHR
SGQGAYGNMCRGGHMFAPTKTWRRWHRKVNVAQKRYAMCSAIAATGIPAL
VMAKGHRIENIPEVPLVVSDKIQSYTKTKEAVILLRRLKAWTDIEQVYKT
KRMRAGKGKMRNRRRIQKLGPLVVYGSDQGLTRAFRNIPGVDTICVDNLN
LLKLAPGGHVGRFCIWTESAFKKLDALYGTWRKASAEKKNWNLPQPKMAQ
TDLSRLLKSEEIRKILRAPNKKISKAVVKTNPLKNARTMVQLNPYSAVLK
KNAELLAAKRIREKAAVAAKKANKKPVANPMAKRTAAKAKKGGKAGKKK

mRNA from alignment at scaffold42_size484952:434648..440360+

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold42_size484952-snap-gene-3.23-mRNA-1 ID=maker-scaffold42_size484952-snap-gene-3.23-mRNA-1|Name=maker-scaffold42_size484952-snap-gene-3.23-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5713bp|location=Sequence derived from alignment at scaffold42_size484952:434648..440360+ (Tigriopus kingsejongensis)
GGATGCGCCGCCCACGTGGCCGCAAATTCCCGCATCGCCGAGGTTTCCTT
ATCCCCTTCCGTCCGTCTCACCTTCCCTTTCCACCCACCTTCATTGGCAT
CGGAACGTCGGAAATCGAGTGGAAGCCGAACTCTCGTCATGGTAAGTGTT
CCCATCACCAGGCTCGGCCTGGGTTAGCTAGCTGTATCCCCCTTAGCGCT
CGGATAACCCTGGGCTACGCCCGGAGGGGATATCGGAGCGGATGGGCGAG
ATTGAGGCGGATGGCCTCCGCACCTCGTAGGTACAACGGCCGACTTCTCC
TTCTCCAGTCTCGGATCGTAGTCAATGGGCGTGCCAGACTAGCGGCCAAC
TCTCAAGCCGAGTGGGACGCCTCCGTTCCACGAGGTGATAAGGCGGCCGA
CACCTGGGTGTCGAGGGCGTCATGGGGGTGCCTGACCCGAGTTCAGGGCC
AGATTGTGATCGCTATTCTGTCCAATTTCAGTCTCTGTCCGCCGCTCGTC
CGGTCATCACCATCTATGGGGAGAAGAACGAGCCCTCGGGGTCGACCTGC
TCCCTGCCGGCCGTCTACCAGGCCCCGATTCGACCCGACATCGTGTCCAT
GATCCATCATGAGATCGCCAAGAACCATCGACAGGCTTATGCCGTCAGCC
AAGACGCTGGTGAGTGGCTCTGTAACCCTGGACTGACTTAACTTGCATTT
CATGTCCTCGGTTTGACCCCACCCTGGGTGATTTCGATCCAAACGAATGC
TAGAGAGACCAGGAGGTTGGCGTTGTGACCCCACTCTGTAGTGGACTCGC
GGTAACGCCTTCTGACAATCGCCCCGTTTTCCCTTCCTTCCTGTCCTAGC
CCACATTCTTTCAAATGGACTAAACCTGTGACTAACGTCTCTCTGGCTAT
CCCTAGGTCACCAAACCAGTGCCGAGTCCTGGGGAACTGGCCGAGCCGTG
GCCCGTATTCCTCGCGTCCGAGGCGGTGGCACCCATCGATCCGGTCAGGG
AGCTTACGGCAACATGTGCCGAGGCGGTCACATGTTCGCCCCCACGAAGA
CTTGGCGCCGCTGGCATCGCAAGGTCAATGTGGCGCAGAAGCGCTACGCC
ATGTGCTCGGCTATTGCCGCCACCGGCATTCCCGCCCTCGTGATGGCCAA
AGGTAAACCCATTGTCCCTTCTAATCGATGCCAGCTCGGGCCATTCAGCC
CCTCGGGGCCCGTGCACCGCTTGACATGATGAATATCCAACTTGGTCTGT
GTTCCTGAACACCCTGATTATAACTTAAGTCCTGACTACCCCTGAACTGA
TGGGCGAAGTTTGTGGTTGTGGGGCCGTAGCTTAACGCCCTGTAGTCCCG
CTCTAGGTCACCGCATCGAGAACATCCCCGAAGTCCCCCTGGTCGTGTCC
GACAAGATTCAGAGCTACACCAAGACCAAGGAGGCCGTGATCCTGCTGCG
TCGCCTGAAGGCGTGGACCGATATTGAGCAGGTGTACAAGACCAAGCGTA
TGCGCGCCGGTAAAGGCAAGATGCGCAATCGTCGACGCATCCAAAAGCTC
GGCCCCCTCGTGGTTTACGGCAGTGATCAGGTACGTCCAACAGCCTGTCG
TTTGCCATTGATGGATGCCCAGTGTGATGAAATTATTTCCGTGTTTATGA
TTCCTATGATCTCAACTTGAAATCCTGATCCCACCACTGATTTGCCCCCC
TCCAGACCNTCGGCAAATAGGGCCGACTAGTGACCCTTAGTAAGGGTTAC
TAGGGCCGACAACATAGCTGCTGAGTGTCTCGGCCTGTCCAATTTCTCTC
GTGCGCCGTGCAGGCCACCCAAAGACCCGGCCAAGGCGCACCGTTTTTTG
TATTTAGACCAGCAGATTGGTTGGCACTTCTCCCTTTCAGCCACTTTCCC
AGGCACGCTCACTCCATACATAGAACCTCGTTGCTTCCGAGTTGTGACCA
ACTGGTAGCTGCGGCTTTTGAGGTCAACACTAGGACTAATACCAGCTACA
TTCTCATTCGAATAGATCCAGTTTTCCTAGGCCTGGTGTATGTAGGCCAA
AAAAATGTATTTCGGGAACTTGACCCAGGACTACGGATATGCTGGAGACA
AGTATTTAACGCAATAGACGCATAAAGTTGTTCAATAGGTGGTATTACGT
TGACGATATTGATCACTTTCACGATTTCGGGTGGCCCTCATTTTGGGTGG
GTGTAAACCTTAATGTGGAACTCACTTTTCATCCCAAGTCCCTTGGGACT
TTTCCTCTATCCGAATGGTGCTGCCCGACCTCGTTCTTTCAGGGTGCTTA
GTGCCGCCAATCATTAACATCACCGCAGATGGCCAAAATATGCCATTGAT
AATAGGGAAAAGTGAAGCAGACAAGAAAAAGTGTTTGACCTGGTAGATGA
ATTGAATTTCACAGTTTTGTTTCGTATTTTTCATTATGATTCCATCCTTG
TATGTTCTGTGCCATCTCCGACCATCACCGTATAAAAGTCGACTCAAAGC
AACTCAGCTAATCATTGCTTATCAACCTAGCGTAGACTAAGGCCGCTCTA
GTAGTAGTAGTATTGGAGCAGCCTTAGCGTAGACCATGGACTCTATAGCT
TTAGAGTCCATGCGTAGACACACAGTTTTGGGCATATCGTTGTTTTGTGC
AGTTCCGTTGGCCAGCACGTGGGCGACATTTGAAGCACCCAGTTTCCAAA
TATGGGCTAGGTGGTCACTATGGCTAGGTATTGAGCCAACTGCATGTAGA
GTGGATCCATTATCATGTTCTTTCTTGTGTGTGTTTGGCATGTCCCCCAA
TCTATGCCACTAGCAATATGTGGGGCGCGAGTGATGCCTATCCTACATAC
TGCGAGATACAAAACAGGTGCGGCCACATCTTGAGGAAAGTTCCCTTCTG
GTTCCCAGCAAATTAAAGTAGTGGTTGGAGCTGGATTGTACGGGGCTGCA
CGGCGACTAGCTCAATTAGCTAATAACATCAGTGGGCCCTGTGTTCCCCA
TGGGGGTTCCATGGTGTGGAACACGAAACCACCGGAAGGTGCGATTACAC
ACACACTGACATCATATTGCTTGGGTTCTCAGGACACACATCGAGCGGTG
GCCCCGGAATTCAATCTGGCATACAATAAAAGCATCATGGCATGACCAGT
CGAGAATTTCAACCTCATTTAGTACTCCATACTTTCGGACCACCCGGTGG
ACGTCAGCTGACGCGCCAGCGTCGGAGAGAAAAGAAAACGTGCCACCCAT
CCGGGTCCGGTGGATCGCACGATGGATCCGGGGTGGCGGGCCTGATCCCG
ATTCGCCTCGAAATTGAACCCCATCGCCAGATGGATGCGCCGCCCACGTG
GCCGCAAATTCCCGCATCGCCGAGGTTTCCTTATCCCCTTCCGTCCGTCT
CACCTTCCCTTTCCACCCACCTTCATTGGCATCGGAACGTCGGAAATCGA
GTGGAAGCCGAACTCTCGTCATGGTAAGTGTTCCCATCACCAGGCTCGGC
CTGGGTTAGCTAGCTGTATCCCCCTTAGCGCTCGGATAACCCTGGGCTAC
GCCCGGAGGGGATATCGGAGCGGATGGGCGAGATTGAGGCGGATGGCCTC
CGCACCTCGTAGGTACAACGGCCGACTTCTCCTTCTCCAGTCTCGGATCG
TAGTCAATGGGCGTGCCAGACTAGCGGCCAACTCTCAAGCCGAGTGGGAC
GCCTCCGTTCCACGAGGTGATAAGGCGGCCGACACCTGGGTGTCGAGGGC
GTCATGGGGGTGCCTGACCCGAGTTCAGGGCCAGATTGTGATCGCTATTC
TGTCCAATTTCAGTCTCTGTCCGCCGCTCGTCCGGTCATCACCATCTATG
GGGAGAAGAACGAGCCCTCGGGGTCGACCTGCTCCCTGCCGGCCGTCTAC
CAGGCCCCGATTCGACCCGACATCGTGTCCATGATCCATCATGAGATCGC
CAAGAACCATCGACAGGCTTATGCCGTCAGCCAAGACGCTGGTGAGTGGC
TCTGTAACCCTGGACTGACTTAACTTGCATTTCATGTCCTCGGTTTGACC
CCACCCTGGGTGATTTCGATCCAAACGAATGCTAGAGAGACCAGGAGGTT
GGCGTTGTGACCCCACTCTGTAGTGGACTCGCGGTAACGCCTTCTGACAA
TCGCCCCGTTTTCCCTTCCTTCCTGTCCTAGCCCACATTCTTTCAAATGG
ACTAAACCTGTGACTAACGTCTCTCTGGCTATCCCTAGGTCACCAAACCA
GTGCCGAGTCCTGGGGAACTGGCCGAGCCGTGGCCCGTATTCCTCGCGTC
CGAGGCGGTGGCACCCATCGATCCGGTCAGGGAGCTTACGGCAACATGTG
CCGAGGCGGTCACATGTTCGCCCCCACGAAGACTTGGCGCCGCTGGCATC
GCAAGGTCAATGTGGCGCAGAAGCGCTACGCCATGTGCTCGGCTATTGCC
GCCACCGGCATTCCCGCCCTCGTGATGGCCAAAGGTAAACCCATTGTCCC
TTCTAATCGATGCCAGCTCGGGCCATTCAGCCCCTCGGGGCCCGTGCACC
GCTTGACATGATGAATATCCAACTTGGTCTGTGTTCCTGAACACCCTGAT
TATAACTTAAGTCCTGACTACCCCTGAACTGATGGGCGAAGTTTGTGGTT
GTGGGGCCGTAGCTTAACGCCCTGTAGTCCCGCTCTAGGTCACCGCATCG
AGAACATCCCCGAAGTCCCCCTGGTCGTGTCCGACAAGATTCAGAGCTAC
ACCAAGACCAAGGAGGCCGTGATCCTGCTGCGTCGCCTGAAGGCGTGGAC
CGATATTGAGCAGGTGTACAAGACCAAGCGTATGCGCGCCGGTAAAGGCA
AGATGCGCAATCGTCGACGCATCCAAAAGCTCGGCCCCCTCGTGGTTTAC
GGCAGTGATCAGGTACGTCCAACAGCCTGTCGTTTGCCATTGATGGATGC
CCAGTGTGATGAAATTATTTCCGTGTTTATGATTCCTATGATCTCAACTT
GAAATCCTGATCCCACCACTGATTTGCCCCCCTCCAGACCCAACAGCCCG
CCCCTGATACTAATAACATGCCTTTCGTTTGCCACAGGGATTGACCCGCG
CCTTCCGTAATATTCCCGGTGTCGACACCATCTGTGTGGACAACCTCAAC
TTGTTGAAGTTGGCTCCCGGTGGACACGTGGGTCGTTTCTGTATCTGGAC
CGAGTCTGCCTTCAAGAAGTTGGACGCTCTGTACGGAACTTGGCGTAAGG
CTTCCGCCGAGAAGAAGAACTGGAACTTGCCTCAACCCAAGATGGCCCAG
ACTGACCTCTCGAGGCTGTTAAAGTCTGAAGAGATCCGCAAGATCCTTCG
AGCTCCCAACAAGAAGATCTCCAAGGCCGTGGTCAAGACCAACCCCTTGA
AGAATGCCCGCACCATGGTTCAATTGAACCCGTACTCTGCCGTTCTGAAG
AAGAACGCAGAGCTGCTCGCTGCCAAGAGGATCCGAGAGAAGGCTGCCGT
GGCTGCCAAAAAAGCCAACAAGAAGCCTGTTGCCAATCCCATGGCCAAGC
GAACTGCTGCCAAGGCCAAGAAAGGTGGCAAGGCTGGGAAAAAGAAGTAG
AAGAGCTTCCTTCCGAGTGAACATCTAGCCATGATCCTCTCAATAAATCA
TATCCATTAAACAAAAATGGATCCTCCTTTTCGTGGCGAGGTTGCGGAAA
TAAAAAAGCTTTT

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