maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1, maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold2346_size16788-snap-gene-0.6-mRNA-1
Unique Namemaker-scaffold2346_size16788-snap-gene-0.6-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold2346_size16788supercontigscaffold2346_size16788:4527..7809 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
transport protein sec61 subunit alphamaker-scaffold2346_size16788-snap-gene-0.6Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:exon:1393maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:exon:1393Tigriopus kingsejongensisexon
maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:exon:1394maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:exon:1394Tigriopus kingsejongensisexon
maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:exon:1395maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:exon:1395Tigriopus kingsejongensisexon
maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:exon:1396maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:exon:1396Tigriopus kingsejongensisexon
maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:five_prime_utrmaker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:cdsmaker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:cdsmaker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:cds-1954765Tigriopus kingsejongensisexon
maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:cdsmaker-scaffold2346_size16788-snap-gene-0.6-mRNA-1:cds-1954766Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1954767auto1954767Tigriopus kingsejongensispolypeptide
Tk03075Tk03075Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk03075

>Tk03075 ID=Tk03075|Name=Tk03075|organism=Tigriopus kingsejongensis|type=polypeptide|length=473bp
MGIKFLEFVRPFCSILPEIQKPERKIQFREKVLWTAVTLFIFLVCCQIPL
FGIMSSDSADPFYWIRVILASNRGTLMELGISPIVTSGMIMQLLAGAKII
EVGDTPKDRALFNGAQKLFGMVITVGQAIVYVMTGMYGEPADIGAGVCLL
IIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKSFSPTT
VNTGRGTEFEGAIIALFHLLATRQDKVRALREAFYRQNLPNLMNLMATIL
IFGVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN
LYVISQMLSVKFAGNFFVNLLGVWSDVHSGRSYPIGGLCYYFSPPETLGH
VVTDPIHAVLYIFFMLGSCAFFSKTWIDVSGSSAKDVAKQLRDQQMVMRG
HRETSMIHELNRYIPTAAAFGGLCIGALSVTADFMGAIGSGTGILLAVTI
IYQYFEIFVKEQNEMGSMGALLF
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mRNA from alignment at scaffold2346_size16788:4527..7809+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1 ID=maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1|Name=maker-scaffold2346_size16788-snap-gene-0.6-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3283bp|location=Sequence derived from alignment at scaffold2346_size16788:4527..7809+ (Tigriopus kingsejongensis)
GTTTTGGAGCCGGTGACGTGTCGGCTAATGACAGCGAGCCTTTGGAGTGG
CGATCGAGTCGGAGGAGTGTGTATACGGACGACACTTCGCAGTCAGCTCC
TAGTGCTTGGAACGTTCGTGTTATTCGGAAGTGGTTCGGATCGATCGGTG
CGTTTGAGTGGGTCGAGTGGAATCAGCCAAGATGGGGAGTAAGTATGGGG
CGGGCACCGGTGGGGGGCGCGGATCTGGGCGGCCCGTCTGACCCGGTTTT
TCACTCTTTGCCACTTCAGTTAAATTCCTGGAATTCGTCAGGCCTTTCTG
CAGCATCTTGCCCGAGATCCAGAAGCCGGAGCGGAAGATCCAGTTCCGCG
AGAAGGTGCTCTGGACGGCCGTGACCCTCTTCATCTTCTTAGTATGTTGC
CAGATCCCGCTTTTCGGGATCATGAGCTCGGACTCAGCCGATCCCTTCTA
CTGGATCCGTGTCATCCTGGCCTCCAATCGAGGTACCCTCATGGAGTTGG
GCATCTCGCCCATCGTCACCTCGGGCATGATCATGCAGCTCCTGGCCGGA
GCCAAGATCATCGAGGTCGGTGATACGCCCAAGGACCGAGCCCTCTTCAA
CGGAGCCCAGAAACGTACGTAGCCCAACAGCCTGCCAGCCCTCAACTCAC
CCTCGGGATCATCAATGGGTCGAATGGCCCCCCCCCCCACCAGTCACCCA
CGGATTCGAAGCTGTGGGGTAGCTTCTGGTGGGGGGGGGGGGATATCCCA
GGTGGTTCAGTGCCAATCTGCGGGGCCTGCCTGGGATCAAAGTCTTTCGC
GAGTTTGTAGCCCAATGGATGCAAGTTCTAGGTTCCCCATCGCCCGGTAG
AGTCGGGGTTGATTAAGCTACGGCTGATAACGGTGAGCCATTCCCCGCCA
GAGCTGCATCCCATCACCCAACCTCGTCTGATGAGGAGAGGGTGGGCTGA
AATATGGACCCCTGGGTGAATGGGGGCGAGAGCTCTGGCTAGGAGCGTTG
GCTCAACTCCGTCTGAGCTCGCCCTACGATTCCGACTCAACGGCCCGCCT
GACGCACGATGGACATTGGCCATCTTATCTGAGGGGGGCGAAGTGGCGAT
TTTCATCCAAGGCCGGCCGCGACTCCGAGCATTTTGAAGTTCAATCCGTC
CAGGGCGGGTTATTCGACCCGGGGATGAACCTGGTGATCATAATTTAAGT
CAAATATCGAAGATGGGAGCATTTTGGCTAACTCGCCCTCGCCACCTGTA
CAGTTTCAGCTGTTGCCTGTGTGCCCACCTGGAAGATCTGTCGATCTAGC
TGGGCCGGTGAGCCACGATAGGAGAAGGGCCCATGTATGGAGTACTGAAT
ATTTCTGGAGGCATGTCCGCTGTTTGTTATGACGCGAAATGACCCAGTTC
GGAAGAAAAGGCTCCTGCATAACCTGTTGTAAGCGAGTAACCGATGAGGT
AACCTTCATGGGAACACGCCAAAGTTAAAGTCGACTACTCGCCTGTGGCT
TCCAAGTGTTACTTTCCTGGATGTAGTCTCTCTGACTTTGTCCTGGTCAA
ACCTTGCCAATTAGACATTCAAACCTCCCGAGACTGCGAGCGTCCCAAAC
TCTGGCCAACCGTCGGTTGTCAATGAAAATGGGATTTCTATGCTGCACAA
TCCAGCGCCTTGTCGTCACATCTACCTATGCCCACTAGCTCTGTGTACAG
CCTGGGATGGCGGGAGCCCGAGAGGTCCGCTGAGCTAGGAGCTCGCCGCC
AATATATTTCTGAAATTCTCTAGGCTCCATTGAATCTTTGCGCACACCTT
CAAGATATGTTCCCATCTTTCAGTTTTCGGCATGGTGATCACCGTGGGTC
AGGCCATCGTTTACGTGATGACCGGCATGTACGGTGAACCCGCTGACATC
GGCGCTGGCGTGTGTCTCTTGATCATCATCCAGCTGTTCGTGGCCGGTCT
GATTGTCCTCCTCCTCGACGAGCTTCTCCAGAAGGGTTATGGTTTGGGAT
CTGGAATCTCCTTGTTTATCGCCACCAACATCTGCGAAACGATCGTGTGG
AAGAGCTTTTCACCCACCACCGTCAATACCGGCCGCGGCACCGAGTTCGA
GGGCGCCATTATCGCCCTCTTCCACCTGTTGGCCACTCGACAAGACAAGG
TCCGTGCCCTGCGCGAGGCTTTCTACCGCCAGAACCTGCCCAATCTGATG
AACCTCATGGCTACCATCCTCATCTTTGGCGTGGTCATATACTTCCAAGG
CTTCCGCGTCGATCTACCCATCAAGTCGGCCCGCTATCGTGGCCAGTACT
CGTCCTACCCCATCAAACTCTTCTACACCTCGAACATTCCCATCATCCTC
CAGTCCGCGCTCGTCTCCAACTTGTACGTGATCTCGCAGATGCTCTCGGT
CAAGTTCGCCGGCAATTTCTTCGTCAACCTCTTGGGTGTCTGGTCGGATG
TTCATAGCGGGAGATCGTATCCTATCGGCGGTTTATGCTACTACTTCTCG
CCGCCCGAAACGCTCGGCCACGTTGTCACAGATCCCATCCACGCCGTCCT
GTACATCTTCTTCATGCTTGGATCGTGCGCTTTCTTCTCCAAGACCTGGA
TCGATGTGTCCGGATCCTCCGCCAAAGATGTAAGTACCCACTCTGTCTCA
TTCGTCTAGCTCAATCGTACTAATGAACCTCTATCCTCGTTTTCAAGGTC
GCCAAGCAACTCCGCGACCAGCAGATGGTTATGCGTGGCCACCGTGAGAC
CTCCATGATCCACGAGCTCAACCGATACATCCCCACTGCTGCCGCCTTCG
GTGGACTCTGCATTGGAGCACTCTCGGTCACGGCCGACTTCATGGGAGCC
ATTGGCTCGGGTACCGGTATTCTTTTGGCTGTCACCATCATCTACCAGTA
CTTCGAGATCTTCGTCAAGGAGCAGAACGAGATGGGAAGCATGGGAGCCC
TGCTTTTCTAAGCCCCACCACACACATCCTAAATACTTGCTCACTGGCGA
AAGATGTCTCGTGGTCTCTCGATTCGAGCATGTTGGGATCCTCCACCCAA
CCAGAAGATGTCTTTTCCCAATACAGCAGCACCCCTTCCCCCACCCCCCC
TCTCCTTTGATAAAATGTCTCACGCTTGTCTCTCAAGATGTCCGACGGCC
GAGAAGAGTTATTATTATAAGTATGAATCATAACAGTGAAAACGCGAAAA
TTCAATCTTACATGTTGTTGTTTTAATGGTATGGTCAATGTACTATTTGT
AGTATCTTGATGCCGAATAAATGCCAAAAAAAC
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