maker-scaffold183_size276960-snap-gene-1.22-mRNA-1, maker-scaffold183_size276960-snap-gene-1.22-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold183_size276960-snap-gene-1.22-mRNA-1
Unique Name	maker-scaffold183_size276960-snap-gene-1.22-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold183_size276960	supercontig	scaffold183_size276960:84858..90514 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Transportin-3	maker-scaffold183_size276960-snap-gene-1.22	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold183_size276960-snap-gene-1.22-mRNA-1:exon:1231	maker-scaffold183_size276960-snap-gene-1.22-mRNA-1:exon:1231	Tigriopus kingsejongensis	exon
maker-scaffold183_size276960-snap-gene-1.22-mRNA-1:exon:1232	maker-scaffold183_size276960-snap-gene-1.22-mRNA-1:exon:1232	Tigriopus kingsejongensis	exon
maker-scaffold183_size276960-snap-gene-1.22-mRNA-1:five_prime_utr	maker-scaffold183_size276960-snap-gene-1.22-mRNA-1:five_prime_utr	Tigriopus kingsejongensis	exon
maker-scaffold183_size276960-snap-gene-1.22-mRNA-1:cds	maker-scaffold183_size276960-snap-gene-1.22-mRNA-1:cds	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1989956	auto1989956	Tigriopus kingsejongensis	polypeptide
Tk01756	Tk01756	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold183_size276960:84858..90514+

protein sequence of Tk01756

>Tk01756 ID=Tk01756|Name=Tk01756|organism=Tigriopus kingsejongensis|type=polypeptide|length=940bp
MAAQLDTCPTSDFVVEAIRTLYHHADPKEKEKASIWLQTWQKSVFAWQVS
DELLHRKVDLESCYMAAQTLRTKVQTSFHELPVEAKASLRDSVLEHFNSI
DQETPHVISTQLCLALADLMLQMPEWKGAVAELIQRYAQTRNVALLELLI
VLPEEVNSRHLRLGANRRSEVVEDLRSSAEFVTQFLRACLTAVLTGGEGG
TSRQCRINLLKCLGSWIELGVVALFGLESDVLMGHAFVVLESPGEDGLVH
EAAVDCVCGMIERMEDLDISTPAVQFELTIFTLIRRLEPAYHAAVTAEDM
NRALNLCRVFTEFGESSLLRILMYPPQSPHFAIGVFDSVLAACAHPDYEI
PGITFNLWHRLSEELYQRDQEATTVMFRPYINRLILALCKHCQMEPDMDH
VLEEGEDFSLFRQRVTELIGDVVFIVGSSCVFKSLFDYVKGAAAWEVMEA
ALFIMSAVAKSVHPKLDENVGEVVDSILTIEPSTHVAVRHTSLRLIGELA
EWIDSHPQYLERILNWLLMGLQESKVASEAATALQNVCAQCRGKMMPHFQ
GLVQILNALDSFSLKPEAANVLIKGVVIILSDLPPDQIAGATSTLCHMQL
GPLAESATSPTAGAQKIPKNSKGDPVLYLDRLSSIFRHITPNVPENQVHP
CLGVIQETWLVVSHVCHTFQLDVRVMESACRTLRFMLRCVGAQATSILEP
LAKMMVTIYQVRPHSCFLYLGSILVDVFSSNAALVSGLLGMMEAFLPPTF
QLLQAENGLRNHPDTVDDFFRLNARFLQRTPVPFLRSNFMASIMECGLLA
VYLDHRDANASVMKFYFDLFHAGRSKEDKEDYVSRLFLIDQIRHDFGAKI
LEALVRAAVFNLPSYTFHDIGDVVFELMLLERTSVCHWLEAALKTLPLED
ANGIVKVTRKQLVKFHKDATTAEESKDVADAIRDFNRLWR

mRNA from alignment at scaffold183_size276960:84858..90514+

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold183_size276960-snap-gene-1.22-mRNA-1 ID=maker-scaffold183_size276960-snap-gene-1.22-mRNA-1|Name=maker-scaffold183_size276960-snap-gene-1.22-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=5657bp|location=Sequence derived from alignment at scaffold183_size276960:84858..90514+ (Tigriopus kingsejongensis)
CAAACCAAACAAACCCTGCGTGTGCAGCGTGATCGAGCGGCTTGTGAGTG
CCCACGCCACGCCCACCATCGGCCCAGGAGGCGGCGTGCGGGGGAGTGGG
ATCGGGGCGAGTTATGGCGGCCCAATTGGACACGTGCCCCACGTCGGACT
TCGTGGTGGAAGCCATCCGGACCCTCTACCATCATGCCGATCCCAAAGAG
AAGGAGAAGGCTTCGATCTGGCTCCAAACCTGGCAAAAGTCCGTGTTTGC
CTGGCAGGTGAGTGACTGAGGGAGGAGACGCCGAAGGGGCGGGTTGGGCT
GATTGAGCAGGTCCAGGCTGGGCCGGCGGGGTTTCGAGGTCAAAGGCGGT
CCAATGGCGACCTAGCCACCGGTCCATGAAGCCCGTGGAGGCTATGCGGT
AAAGGTAGGGGATGGCGGTCGGGCGCCCTAACAGTGCTAACAACAAACCC
GACCTAACCCAACCCTAACAGCATGTCAACTACGCTCGAATTAAGCTAGC
CGCAGCGCTAATCTAAGTCAATTACGCTCAAGTTTAGCTAGCCGCAGCGC
TAATCTAAGTCAACTAAGCACGAATTAAGCTAGCCGCAGCGCTAATCTAT
GTCAATTACGCTCAAGTTTAGCTAGCCGCAGCGCTAATCTATGTCAATTA
CGCTCAAGTTTAGCTAGCCGCAGCGCTCATCTAAGTCAATTACGCTCAAG
TTTAGCTAGCCGCAGCGCTAATCTANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAGCTAGCCGCAGCGCTAATCTATGTCAATTACGCTCAAGT
TTAGCTAGCCGCAGCGCTAATCTAAGTCAATTACGCTCAAGTTTAGCTAG
CCGCAGCGCTAATCTAGGTCAACTAAGCACGAATTAAGCTAGCCGCAGCG
CTAATCTAAGTCAATTACGCTCAAGTTTAGCTAGCCGCAGCGCTAATCTA
GGTCAACTAAGCACGAATTAAGCTAGCCGCAGCGCTAATCGATGTCAATT
ACGCACGAATTAAGCTAGCCGCAGCGCTAATCTAGGTCAACTAAGCACGA
ATTAAGCTAGCCGCCGCGCTTATATAGGTGAAATACGCTCGAGTGACCCT
AGCCGCAGCGCTCGGTGTACCAAACCTCTTCGGCGCACGACTGCTATGCC
CTACCTTATCCGGGCCGGGTGCCGCCGGATGAATAGTGTCGCCCTGGGAC
CTGATAGATGAATTGGGTGGCTCCCACCGTGCCCACGGATCGACCCCAGG
AAAAACTCGCCGGGGTTGTGGCTGGCTGAGGATCGCTTTCAGGGACCTGG
GCTGTCCATTCCCGATGGGCCCAGGAATGCCTGACTGACCACAGTTACCA
GGCCGACGGTGCCTACCGAGAGCCTGACGATCTCGTGGACCGGTTTATTT
GGGCACTCCCACGACTAGGGATAGGTATGCCAGGCTATTTAGTACGGAGA
GAGTGCGGGTGCTTTCTAACGCGAGGCCTGCGTCGGGTCCCATCTCGCCC
ATCCGAGTTCGCACGTTGAACCACCGAGGCTAGACGATGTCCCCCCAGGC
CAGACCAAAAGCGGATATTCGTCGCGTTCCCCGCGCCATCGGGGTCTAAC
CGTCCATTTGAAGGCGAATACATGGCCCCAATTGGGCCAGCTAAGGATCG
CCCAATGCGGGGGGTCACGCTCACAACGTCATGTCGCGGTGGTGGGTCCC
AATTGGGCTCGTCCTCCTAATCCACCCCCATTGATCCCTTGGGCTCTGGT
TCGTTATTGTCCCACTCGGATCCAGCCCTGACCGCAGATTCCATCACTCG
ACCCCATGATGGCCGGTATTGTGTGGCCATAGCGATCTAGTTCGGCCAGG
CCTGGGGAGGCGCCCTCGGCCTGCTGCTCCTCAACGCATGGATGCGGGTA
TAAAACACGCTTTGGGTTCTCTTTCAGGTGTCGGACGAACTCCTACATCG
CAAAGTCGACCTGGAGAGTTGCTACATGGCGGCTCAAACCCTGCGCACCA
AGGTCCAGACCTCCTTCCACGAGCTGCCGGTCGAGGCCAAGGCCTCCCTC
CGCGATTCGGTCCTCGAGCACTTCAACTCCATCGACCAAGAAACACCCCA
CGTCATCTCGACCCAGTTGTGTTTGGCCTTGGCTGACCTCATGCTCCAGA
TGCCCGAGTGGAAGGGGGCGGTGGCCGAGCTCATTCAACGCTACGCTCAA
ACCCGCAACGTGGCCCTACTCGAGCTTCTCATCGTCTTGCCCGAGGAGGT
CAACTCCCGCCACCTTCGACTGGGCGCCAATCGGCGAAGTGAGGTAGTCG
AAGATCTTCGCAGCTCGGCCGAGTTTGTCACGCAGTTTTTGCGGGCTTGT
CTGACCGCTGTATTGACGGGCGGGGAGGGTGGAACTAGTCGTCAATGCCG
TATCAACCTCCTCAAATGCCTGGGCTCATGGATCGAGCTTGGCGTGGTGG
CCTTATTCGGACTGGAGTCCGATGTCCTCATGGGCCACGCCTTCGTTGTC
CTCGAGAGCCCTGGGGAGGATGGGCTCGTACACGAGGCTGCTGTGGATTG
CGTATGCGGAATGATCGAGCGCATGGAGGACTTGGACATCTCCACCCCGG
CTGTCCAATTCGAGCTCACCATATTCACCCTTATCCGACGCCTGGAGCCA
GCATATCATGCTGCCGTGACCGCCGAGGACATGAATCGAGCCCTGAATCT
GTGCCGGGTGTTCACTGAGTTTGGCGAGTCTTCCTTGCTCCGTATCCTCA
TGTACCCACCCCAGAGTCCTCACTTCGCCATTGGCGTGTTCGACTCGGTT
TTGGCCGCCTGTGCTCACCCCGACTACGAGATACCCGGCATCACCTTTAA
CCTGTGGCATCGGCTCAGTGAGGAGCTGTATCAGCGAGACCAAGAGGCCA
CCACAGTCATGTTCCGTCCCTATATTAATCGGCTCATTCTGGCTCTCTGC
AAGCACTGTCAGATGGAGCCGGACATGGACCATGTTCTCGAGGAGGGGGA
AGACTTTTCTCTATTCCGCCAACGAGTCACCGAACTCATTGGGGACGTCG
TGTTCATCGTGGGCTCGTCCTGCGTGTTCAAGAGCCTCTTCGACTACGTT
AAGGGTGCAGCGGCTTGGGAAGTCATGGAGGCTGCCCTCTTCATTATGTC
GGCTGTAGCCAAGAGTGTCCACCCAAAGCTGGATGAGAACGTGGGCGAGG
TGGTGGACAGCATCCTCACAATTGAACCCAGCACGCATGTGGCTGTCCGT
CACACCTCGCTCAGGCTCATAGGCGAGCTGGCCGAGTGGATCGATTCACA
CCCCCAGTATTTGGAAAGGATTCTTAACTGGCTCTTGATGGGACTGCAAG
AGTCCAAAGTGGCCTCTGAAGCCGCCACGGCTCTGCAGAATGTGTGTGCT
CAATGCCGTGGCAAAATGATGCCCCACTTTCAAGGCCTGGTCCAAATTCT
CAACGCGCTCGACTCCTTTAGTCTCAAACCCGAGGCTGCCAACGTTCTCA
TCAAGGGAGTGGTCATCATCCTCTCGGACTTGCCTCCAGACCAGATTGCT
GGCGCCACCAGCACCCTCTGTCACATGCAACTCGGACCCCTCGCGGAGAG
CGCCACTTCGCCCACGGCGGGAGCCCAAAAGATCCCTAAGAACTCCAAGG
GCGATCCTGTGCTCTATTTGGATCGGCTCTCGAGCATCTTCCGCCACATC
ACTCCTAATGTCCCCGAGAACCAGGTCCACCCCTGCTTGGGCGTGATCCA
GGAAACTTGGCTGGTGGTGAGTCATGTGTGCCACACCTTTCAGCTGGATG
TACGCGTCATGGAGAGCGCGTGTCGCACTCTCCGCTTCATGTTGCGATGC
GTGGGAGCTCAAGCTACGTCCATTTTGGAACCCCTGGCCAAGATGATGGT
CACCATCTATCAAGTGCGCCCGCATAGCTGCTTCCTCTACCTGGGCTCCA
TTCTCGTTGACGTATTTTCGTCAAACGCTGCGCTAGTGTCTGGGCTACTG
GGCATGATGGAGGCGTTTCTCCCGCCCACGTTTCAATTGCTCCAGGCCGA
GAATGGCCTGAGGAACCATCCCGACACGGTGGACGATTTCTTCCGACTCA
ACGCCAGATTCCTTCAGAGAACTCCCGTCCCATTCTTACGGTCCAATTTC
ATGGCCTCGATCATGGAGTGCGGCCTCTTGGCCGTCTACCTCGACCACCG
TGACGCCAACGCTTCGGTTATGAAGTTCTACTTCGACCTCTTCCATGCCG
GACGCTCCAAGGAAGACAAGGAAGACTATGTAAGCCGCCTATTCCTCATC
GACCAGATCCGCCACGACTTTGGGGCCAAAATCCTCGAGGCGCTCGTCAG
AGCTGCCGTTTTCAATCTCCCAAGCTACACATTCCACGATATCGGCGATG
TGGTCTTCGAACTCATGCTCCTCGAGCGAACCAGTGTTTGCCACTGGCTT
GAGGCTGCACTCAAGACCTTGCCGCTCGAGGACGCCAATGGCATTGTCAA
GGTGACCAGGAAGCAGCTGGTCAAGTTCCACAAGGATGCGACCACGGCCG
AAGAGTCTAAAGACGTGGCCGACGCCATCCGTGATTTCAATCGATTGTGG
AGATAATTGGAATCCGTCGATGTGGAAGTGACTTCCATGTGAAATGTGAT
ACTGGCCGCCAAACAAGGCGAGTGGTGAACTTTCAAAGCAAGCACGTGCA
CTCGAGTGGAGTGCCATTATCTCCATGTTAAAATGTCCCTCTAGGATCAT
TGAAATGTACCATGTTTGTTCTCTACCAAAAGACTCCAACTGTATCTGGA
GATGTGGATTGAATTTCTAGCCAGAGTTACGACATTCACTAATGGACTTG
GTCCACG

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