maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1, maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1
Unique Name	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1289_size50518	supercontig	scaffold1289_size50518:5462..13214 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Trypsin-1	maker-scaffold1289_size50518-snap-gene-0.10	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:exon:289	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:exon:289	Tigriopus kingsejongensis	exon
maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:exon:290	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:exon:290	Tigriopus kingsejongensis	exon
maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:exon:291	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:exon:291	Tigriopus kingsejongensis	exon
maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:exon:292	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:exon:292	Tigriopus kingsejongensis	exon
maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:cds	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:cds	Tigriopus kingsejongensis	exon
maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:cds	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:cds-1955847	Tigriopus kingsejongensis	exon
maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:cds	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:cds-1955848	Tigriopus kingsejongensis	exon
maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:cds	maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1:cds-1955849	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto1955850	auto1955850	Tigriopus kingsejongensis	polypeptide
Tk08062	Tk08062	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold1289_size50518:5462..13214-

protein sequence of Tk08062

>Tk08062 ID=Tk08062|Name=Tk08062|organism=Tigriopus kingsejongensis|type=polypeptide|length=278bp
LSSLNELTVHAVAMETWRAFHSQDGPDGSRKALGQLLFPSNVATRDSADK
IVGGSEVVPNSIPFQVSLQVPGIDGHFCGGAIYDESTIITAAHCCAIPSP
SELMVIAGEHSLSNIDGTEQLRYVSKIISHEDYGTPGPVSNDICLLKLSE
PLELNDEVAATKLPAQGEEYDSNSTMVVSGWGTLSSGGSSPDVLMSVTVP
FVEDSVCQDNYPLAIIDDSMLCAGEEGVDSCQEDSGGPLTCDGVHCGVVS
WGSGCGGVNQPGVYAQTSYFINWIQANA

mRNA from alignment at scaffold1289_size50518:5462..13214-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1 ID=maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1|Name=maker-scaffold1289_size50518-snap-gene-0.10-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7753bp|location=Sequence derived from alignment at scaffold1289_size50518:5462..13214- (Tigriopus kingsejongensis)
CGGGCAGGTTTGTCCAGCCTCAATGAGCTCACGGTCCATGCCGTGGCCAT
GGAGACGTGGCGAGCCTTCCACAGCCAAGATGGGCCGGATGGCTCGAGGA
AAGCCCTTGGCCAGCTTCTCTTCCCCTCCAACGTCGCCACGAGGTCGACC
AGCGTCGGAGGCAGCAGGAGTTGTCTCACCGCATCTTCCCTACGCAGCCA
ACACCCTGGTGGACAACGGAATCGCCATGTGGAACAAAGCCAGAACCAAG
CGGATGGCTTCGAAAAAGTCAAATAAAGATCCAGATCGCCCCCCCCCCAT
TTGTTCAATGTCAGATTCTTAATTTGCATGGCTGACATTATTTTGGTTTT
GCCGGTGATATATTATAATTCGAGTTTACATAATTTGTATGCGCTGGCCT
CTTGTCTTGGTTTCCTTTAGAGCGTCTTGTAAAGCTTGTTTTTACACTTT
TGCGTCTCGCCGTCGTCCAGATATGTTTTGTTTTATAGTTTTATTTTGTA
GTTTTGTTTTATAGTTTTGTTTTATAGTTTTGTTTTATAGTTTTGTTTTA
GTTTTGTTTTATAGTTTTGTTTTATAGTTTTGTTTTATAGTTTTGTTTTA
TAGTTTTGTTTTATAGTTTTGTTTTATAGTTTTGTTTTATAGTTTTGTTT
TATAGTTTTGTTTTATAGTTTTGTTTTATAGTTTTGTTTTATAGTTTTGT
TTTATAGTTTTGTTTTATAGTTTTGTTTTATAGTTTTGTTTTATTGACTT
CTTTTATATAGTTTTGTTTTATATAGTTTTGTTTTATATAGTTTTGTTTT
ATGTAGTTTTGTTTTATATGGTTTTGTATAGTTGGTTGATTGTGCTGGCC
CCGGACATTTCTGTCCGGAAATGACATCTCTGACGAGACTTAGTCTGACC
GTATTCATGAATTGTTACCTTACCCTCGAGGAATGACCACAGGTTCACTC
AGTTTCGCCCGCAAAGGCAGCCCACATGGTGATCTCCACGGTAACCAGCA
GGTGCTACTAGCCGCTGCAGTTGCACTTGGTAACCGGCAGAGGGCGCTCA
TGGGAGTTTGGCGGCGGTTGCACGCGGAACCAGCAGCAACAACAAATCTT
ACCACGTCGTTGTTATCGGCCAAGCATCGGTTGCTGAAGGTCTTGCCGTT
CTGGCCGCAAACGGGCTGTTAAGAAGCAGGGCAAGGGGAGCTGCTTGGGG
AATGTTGGAAGCTAGCGTCGGCCTGGTCTTCTTCGTCCTGGTCTTGGGTC
TGTCGCTTTTCGGCCTTTTTAGTGACAGCACTGGAAGTCGTAGAATTTCC
AGTACAGGGACATTCACCGGTGCAAGCGACCACCTAAGGAGAGATTGGCA
AATGGTTCACATCTCGTTTTGGTACAAGTTGACACTTCAATGGGACAATG
TGAACAAGTGCAGAATGACCACTTGTTAAGGCTGAGCATATGCTGAATGA
AATGGACCATTCCCACGGAAAGAAGGCGATTGAATAAGCAATACAAAGGT
GCCCTTTGAATGAAGTAAAACAATGTACATGTCTTGAAAAGTTATGTTTT
CAACCCAATAATTTCTGACAAGAAAGTCCGCCACTACTGTCTTTATTGAA
ACACAAGCTGGAAAACAGGACACGACGTTATTCTCAAACGCAAATCAGTC
TTTGAAAATGGTGTCATAAAGTAGGAATGGCGTCCCAAAAGAGGCTTATT
AAAGGGCCAACACAGAATGGATCAAGTTAACAAACACTAATTACCCGCGG
AAGATGCCTACTTTCCGTGGCTCAAAAATTCAGAGGATGCCTCTTTTAGT
TTTGGCAGAAATGGACCATTTTTCGAAGAAATGACAATTTCTCTTTTTGT
AACTGGGTCGTCAAACAAAATATCAAGTAGATCCCATTTTGGTTGGCCAA
AACCGAATCAATTGATGAAAAAAACGCATTGGACTTGCGTTAAAACCAAT
CTTCTGGCTCAAATCATTTGGAAACTGACTGTGTGGTGTTTAAAAGAGAA
CCCATTGGAATGCCTTGAATTTCAGTGGTGGCTGGAAAATCGATCCGCAA
GAAAAACCAAATTTTGAGCCACAAACAAAAGATCTTAGAGGTTGTCGCGG
TTTAGAGTTATCTCATGTGCATTTTTGTCAGACTCTCCTACAAGCTTCCA
GTTTTAAACTTAGGTTATCAATTACTGCAGGGGGGGTTCCACTTTTTTGA
GGTGGGCTTACCGTCTTTTTGCATTTGGCCTCGCACTCGATAGTACATGC
CTAGGTGTGTGTGTGTAATCATTTATTTTATTTTTATTTTTCAGAGCACA
TGGAATTCACATAGATTAAACCACTAGTTTTGTGAACTGTGTCTGAAAAA
GTCAATATACTGTACAATAATATTAAAGGCAAAAGGAAAACAAATTTGTA
CTGGATAGTACAGTGTCACTAGATATGACTCTTGACTAGGATGAGAACTG
ACAAGTTGTTTAGGGAGTCACAGATAAGTAAGCCTGATTTATCAATTTTT
CACTTAAATGGGGGCAACTTTTGCCAAGTTCTTTGCCACCTTCATGGCCA
CTCCCTTGTTGGGTGCCTCCCTCAAGTCCTTGGAGCCATTCCAAATGGTA
GTGGCATGCCACACAAAGGTATCTGCCTTAGAAGGGAGGGGGAGGGGAAT
CTCACCATTTGTTGCTGCCCTGGTGCTCCTATCACCCTTACTATTGAAGA
GCAGGTTGCCAACAGGGTTCCTGGATCCATTGTGTCCATGAGAACTGTGG
AAGGCTTTCCATGCCTCCATGGCCACAGCACGGACAGCCATTGAGTTGAG
CGAAGGGATGCTTGCCTTGGAGAGAAGCTCAGAGATCTTGACATGGTCCT
CTCTCTTAGTACCAGTGAGGGTCCTAGCCACATCATTTATGGCTTCCTGC
ACTGACTTGGCTCCAGGGGAGGGGCCAGCTGATTCATCTTCCAGTCTTGG
GGTGGTAACTGCTGCAAGTGCATAACCAACTTTCCCCATGACGATGCNNN
NNNNNNNNNNNNNNNNTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTAATGATTTATTTTTATTTTTCAG
AGCACATGGAATTCACATAGATTAAACCACTAGTTCTGTGAACTGTGTCT
GAAAAAGTCAATATACTGTACAATAATATTAAAGGCAAAAGGAAAACAAA
TTTGTACTGGATAGTACAGTGTCACTAGATATGACTCTTGACTAGGATGA
GAACTGACAAGTTGTTTAGGGAGTCACAGATAAGTAAGCCTGATTTATCA
ATTTTTCACTTAAATGGGGGCAACTTTTGCCAAGTTCTTTGCCACCTTCA
TGGCCACTCCCTTGTTGGGTGCCTCCCTCAAGTCCTTGGAGCCATTCCAA
ATGGTAGTGGCATGCCACACAAAGGTATCTGCCTTAGAAGGGAGGGGGAG
GGGAATCTCACCATTTGTTGCTGCCCTGGTGCTCCTATCACCCTTACTAT
TGAAGAGCAGGTTGCCAACAGGGTTCCTGGATCCATTGGGTCCCTCAGAA
CTGTGGAAGGCTTTCCATGCCTCCATGGCCACAGCACGGACAGCAATTGA
GTTGAGCGAAGGGATGCTTGCCTTGGAGAGAAGCTCAGAGATCTCTTGAC
ATGGTCCTCTCTCTTAGTACCAGTGAGGGTCCTAGCCACATCATTGTCGT
CTTCGCCGCAGACTTGATCACGGCCTTGGTTTCTGCATCGAACGCAGCCG
GCGATGATGGAGAGGAAGACGAAGGACTTGATTTGGACCATTTCCAATGT
TTTTGAATGTTGACACTCGACTGAATACAATCTAGCCTCGGTCTGAGGTT
TTTATAGGTGGAGGCGCGACCCAGTTTTATCCAGATCCCCAACTGGCCCA
ACGTTTCACGCATCCTCGCCACAGGTGAGCTGCAGAGCTTGAGGATACTT
TCAGGCAGAAACTGGTAGTCAGGAATCTTCATGGTGTCTCAAGCGATCTT
AGTGAGCGATCACTGCTGAATTGCTAGGAAAAAGTTGCCTCTTTGTGAAA
GGGTTAATCCCCTAAAGCTACTCAGAATGACTCGAATCAATCCAAAGTTA
TATTTATGGACACAACAAATTTTTGACTGTACAGAGAACAAGAGAACTTC
AGAGGAAGAAAAGGGGAAGAAAAAAGGAAGAAAAAAGGAAGAAAAGAGGA
AGAAAAGAGGAAGACAAGAGGAAGAAAAGAGGAAGACAAGAGTAGGAAAA
GAGGAAGACAAGAGTAAGAAAAGAGTAAGAAAAGAGTAAGAAAAGAGGAA
GAAAAGAGGAAGAAAAGAGGAAGAAAAGAGGAAGAAAAGAGGAAGAAAAG
AGGAAGAAAAGAGGAAGAAAAGAGAGGAAGAAATGAGGAAGAAAAGAGGA
AGAAAAGGGGAAGAAAAGAGGAAGAAAAGAGGAAGAAAAGAGGAAGAAAA
GAGGAAGAAAAGAGGAAGAAAAGAGGAAGAAAAGAGGACGAAAAGAGGAC
GAAAAGAGGAAGAAAAGAGGAAGAAAAGATTATGATGGCAACTTGTGAAT
ACATACAATACGGCGACCAAGCTTGGGAGGACTTGTGCTGGCACCACTTC
TCTCTTGGCCCTTGGGCTCCGGCTTGCTGTAGGATCCTCGGGCAGCGTCC
TCGCTGCGGTCCGACCCCGTGTCCCAATCTGTGCTTGCTAACGCCGCCTC
ATGTCTTATCAGCGCCCTGCTGCGGGGCCAAAGGATGGCCTTTCCCCGCC
GATCGGGTTGATAATATCGGATGTATTCTTTCACCACAATTTACTCACGT
CCGATTTCATCGGATACTCCACGGAAGAGGAAGTCTTAATTCAGCTTCTT
GGCCTAATTATTTGAACTTAGCTTAGCCAACTTCTTTGCCGCCGTCAAGC
GGGATATTTGAATTTGCCCCTGGCATATCTTTCCACACTCAGGTAAGCGG
AACTCTTCTTTGATAAACGAATTCGATATGGCGCAGACGGTATGAAAATG
AACAGGTGCAACTTAGATTTGCGTCACAGGTTTGGATAGTGTTGGGATCA
AGGCTGGTGGTTATGCTAAAGTTTTAAAGAATATCCTGGAGTTGTTCTGT
TCTACGAGTTCGTACATCGTTTTTCGTCGTTCGTACATCGTTTTTCCAAT
CTTAGTGGAAATCTTTGCAACATGGATTTAGCACCCTGAAACACCCTACT
TAAAAATGACGGATGGCCCTGGGGCTTTCATTTCACTACTGCAATACATT
AAAAGTTATTCATCACTTAACCATGCTTAACCCTATTTTGAATAAATGAA
TACAAACATCCGTGTGATGTTTTCTTCTCTACATACAAATCAAACCAAGT
TGAAATTAATGGGGATATTAACCAAATACTCATCGGTTACAACATTAATT
TCAAAACCGGTTAACCAAACATTCCTAATAAAATGTTCTCGTGCACCAAA
TGAAATGTAACAAAATTAGGTATCCAGCCGCAATAGGCCTTAGTTCGACC
GAAGTTTTCTTCAAAAACAAAAAAAGAGTAGAATTTGAAACTTTAAGAAG
TATAATCCACGCTATTTGGAGAGTGTCAGCATCATAGCGCTAGATATTGT
AACTGATGCATTTTAGCTCTTGGAGCTATCAGAGTTATCCTACAATAATA
TGTTACATCTCCTCCAATAGTATTCGATTTTTTAAGCGACTGGGTTTCTG
TGTAGCCGGTGCTGTAACTGCGTCAGCGCACTTGCTGGCTTATGTTTCAT
CGTGATCCTCGTAGCCATCTTAGTTCTCATAACGAATGTGGATGTCTTTG
GGTGGGAACACCTTTTTTCGACTCAATTGGTCTCTGCAAACGTGTCAGAC
GTTCCCATCAATGAAAGGACTCAGATAGATGTGTTGTAATTTGATAAAGA
CGTCATTGCTCCTCTATTTAAGCTTTTGCATGTAATGTTTGTTTCAGTTC
TCCTCAATTTTCAAATGGCTGTCACTAACATTTCAATCGTTTGTTAAGTT
ATCAGGAAAATTGCTATTTGATTTTTGTCACGATTTCTGTATTATTACAT
CTACAATTGTATTATATTTTTTTGAATGTTGCAAAAAAGCATTATGGAAG
CACGAGAAAGGCTTTAATTGGGATCTTCAATTAATCTTTTCACATTTTGC
CAAATTTCAGTGCATCAATGGACACATTATCTTTGTTATTCGTAATCTCC
TTGGTTATACACCATAGACCAAGGGAAGACCACCAAAGGAAATTGGTGGT
CTTCGACTTGAGAATTGGCAAGGACCAAAGATAAAATATAAAACAGCCAT
ATATCATACAAGTGCACCACTTGTACACAAAATTGACGCAGTGTCACACG
AGACGAGATAGCCTTGTTACAAAATTGAGTAAAACACATGATTTTTAAGA
TTCCCAATTTGTATCAATAAAACATGAGCACGCAAAACTATCAGGGGGAT
ATCCCGGAACGACGTCAAATATCCGCAGACTCCCCGTGTATACATATATG
TAGTATATTGTACCTATATGTATACCTTTTCTACTGATACAGATGACTAG
CTTCAATCTAATTTAGGTCAAAACATGTACGTTTGTACTGTTAATTATCT
GTACAGAACACGTAAATTTTGCCAGACTATAAAAAGGTCTCACTCTTCGC
TAATCGTCGGCAGTTCTCAAAGAAAGGAAAGGAAGATGCTGAAGTTTACT
CTTGTCGTCGCCATGGTGGCTCTTGGAGCCCAGGCTGGTCGCATCCGACC
AATCATGCCCAAGAGGCCTATGGAGTGAGTACCAGTCTTTATGAGAGTTA
TCCCAAATAATTGAGGAATAAAAGTACCCCCAAGTCTTGCATGGCGAGGA
TATTCATTGCTCATATTCTCCTCCAGAGACTCCGCCGACAAGATAGTGGG
CGGCAGCGAGGTGGTGCCCAACTCCATCCCTTTCCAAGTGTCCCTTCAGG
TCCCTGGTATTGACGGCCACTTTTGTGGTGGAGCCATCTATGACGAGTCT
ACTATCATCACCGCCGCTCATTGCTGTGCGATCCCATCCCCATCTGAGTT
GATGGTCATTGCTGGAGAGCACAGCCTGTCCAACATCGACGGCACCGAGC
AGCTCCGCTATGTTTCCAAGATCATCAGTCATGAGGACTACGGAACCCCC
GGACCGGTCAGCAATGACATCTGCTTGTTGAAGCTGAGCGAGCCCCTGGA
ACTGAATGAGTGAGATAAGCTTCGAAGAGCATAGGTACTTAAATTGAACC
CAAATATTGGTGATCTTGTCAGTGTCATTTCACCCCAATTAGTGAGGTTG
CCGCCACCAAGCTTCCTGCCCAAGGTGAGGAGTATGATTCTAACAGCACC
ATGGTCGTCTCCGGATGGGGCACCCTCTCGTCTGGTGGATCCTCCCCTGA
TGTCCTGATGTCTGTCACCGTTCCCTTTGTTGAGGATTCTGGTAAGTGGG
CCAACCAAGGGTTGGCCTTAAACTATCATCCCTCCATTGGGAGTGGTGCC
CCTTCATTGTTTCCCTCCATTTGCACTTGCAGTGTGCCAGGACAACTACC
CTCTTGCAATTATTGATGACTCCATGCTCTGCGCCGGTGAGGAGGGTGTT
GACTCTTGCCAAGAAGACTCTGGTGGTCCCTTAACTTGTGACGGTGTCCA
CTGCGGTGTCGTGTCCTGGGGATCCGGTTGTGGTGGTGTAAACCAGCCTG
GAGTCTATGCTCAGACTTCCTACTTTATTAACTGGATCCAAGCCAATGCA
TAA

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