gamma-aminobutyric acid receptor alpha-like, snap_masked-scaffold691_size110934-processed-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000004091 (supercontig:LSalAtl2s:LSalAtl2s217:408116:410199:1 gene:EMLSAG00000004091 transcript:EMLSAT00000004091 description:"maker-LSalAtl2s217-augustus-gene-4.34") HSP 1 Score: 451.055 bits (1159), Expect = 3.527e-154 Identity = 239/465 (51.40%), Postives = 305/465 (65.59%), Query Frame = 0 Query: 90 VGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDKLGLAQFHLVNFKSFTDIRLSSRRTRVG-FRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCI--VRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLM 551 +GGPP+ V INLSI SMGPV+E FS+DCYFRQSWVD+RL+YN +GV LALNW FLA IWVPDTF++NG+KS+LHKITVPNRFVR+ P G+VSYSQRLTI A C M+L KFP DTQ+CPL GSFG D++Y+W +P++VS +KLGLAQFHL+N+ S+ I S R T G +RNDS++ +EF FERQ+G+FLLQIYTPL LIVFCSWVAFWL+KT+KGGE PART LGAN+VLSIVNIGF GK RP VGYATA+D+FIILCF +VFAAL+EFACINF+D I RIK E +E + + E + M + V +D E ++L + + ++D E + + + + E + +K S LI Y TE++ Y I +ID Y R FP FL+LQ++YW+ YLY++ Sbjct: 89 LGGPPVKVVINLSILSMGPVDEARNAFSMDCYFRQSWVDERLKYNTSGVEVLALNWAFLAKIWVPDTFIINGKKSFLHKITVPNRFVRVSPTGKVSYSQRLTILANCIMNLKKFPFDTQICPLKLGSFGHSNKDLIYQWKKPKAVSFNKLGLAQFHLINYSSYNIIEPSLRLTEKGNYRNDSSSVMEFVFERQSGYFLLQIYTPLTLIVFCSWVAFWLVKTEKGGEXPARTXLGANSVLSIVNIGFTGKDRPKVGYATALDVFIILCFFTVFAALVEFACINFIDTFIKWKRIKIEEQ----------KESDGGKEEAEPNITMVSGDNVQVIVIVDK-----EEDDDLIYVDEDESSDEEEEEEDNFLDRFLHFFGRCQHSIFERTERYISKLSRKPLIESRIY-----------------TETFDY------IQEIDGYCRKGFPLCFLLLQILYWVLYLYVI 515
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000004092 (supercontig:LSalAtl2s:LSalAtl2s217:422807:437258:1 gene:EMLSAG00000004092 transcript:EMLSAT00000004092 description:"augustus_masked-LSalAtl2s217-processed-gene-4.1") HSP 1 Score: 383.645 bits (984), Expect = 7.767e-128 Identity = 203/468 (43.38%), Postives = 286/468 (61.11%), Query Frame = 0 Query: 90 VGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSID-KLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEP-----EVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLM 551 +G P+ V++N +IRSMGPV+E +F +DCYFRQ W D RL YN++ ++EL +NWQ L IW PDTF++NG+ SYLHK+TVPNRF+RI P+GR+SYSQRLT+ A C M L KFPLD+Q CPL GSFG +I+Y W +S+D KLGLAQ+HL+++ + R S R G +N S +L F F+R+TG++LLQIY PL LIV CSWV FWLIKT+KGGE+PART LG L+IV IGFGGKS+P VGYATA+D+FI+LCF++VFAAL+EFA INF+D + R+K+ + ++EE P E VS+ +I +D + + +N + T + + +I + LE +++ ++K SI +R ++M Y + + + ++D +R LFP F +L +IYW SY+Y+ Sbjct: 97 IGDSPIKVSVNFAIRSMGPVDEQKQLFLMDCYFRQYWTDPRLVYNSSKLNELPMNWQXLTKIWRPDTFIINGKNSYLHKMTVPNRFIRISPDGRISYSQRLTVKARCEMDLRKFPLDSQHCPLEIGSFGHGVDEILYNWTS-MPLSMDKKLGLAQYHLISWNNSAFTRYS--RNAGGDQNVSVIALHFTFQRRTGYYLLQIYIPLTLIVCCSWVTFWLIKTEKGGEIPARTSLGGTXXLAIVTIGFGGKSKPRVGYATALDVFIVLCFMTVFAALIEFAFINFIDTLVRRLKKND---------ELEELSHLYPRSAVYETVSRSYHRSISTGQGDELIDESIITLTPAQNRWKKVQATVTSRGKPNFSKII----------RQLHLEEQRKNQSK-SI-----WLXFRSVRSLDM--------------YQDHYKFLLRVDAVSRKLFPLGFFILNLIYWASYIYIF 522
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000003120 (supercontig:LSalAtl2s:LSalAtl2s1753:14457:18648:1 gene:EMLSAG00000003120 transcript:EMLSAT00000003120 description:"maker-LSalAtl2s1753-augustus-gene-0.11") HSP 1 Score: 372.474 bits (955), Expect = 1.033e-118 Identity = 203/473 (42.92%), Postives = 284/473 (60.04%), Query Frame = 0 Query: 91 GGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATG-VSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEP--RSVSIDKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLA----AKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKY-----GPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLM 551 GGPP V +NL I SMGPV+E + +D YFRQ+WVD+RL +NAT V+EL LNWQ L IW PDT+ +NG+KS +HKITVPNRF+RI P+G VS+SQRLTI A+C M L KFP D+Q CPLH GS+G A +++Y W + ++ K + QF+L+ + S + +++R+ GFRNDS AS+ F F+RQ GFFLLQIYTP+ +IV CSWVAFW++KTD P+R LG + LS+ IGF GK +P V Y TA+DIFII+CF++VF +L+E+A IN++ + I R K R EK LLA K+ + K + K +M I + T+ +P ++ EN+ T D + V + TLE + K + DLI ++ C+ IE L P+++ Y+Y +T E + KID AR LFP F+ + Y + Y Y++ Sbjct: 504 GGPPCKVIMNLLINSMGPVDEKSQSYLVDAYFRQAWVDQRLSFNATSSVTELPLNWQILNKIWKPDTYFINGKKSKMHKITVPNRFLRISPDGLVSFSQRLTIHAQCLMELKKFPFDSQECPLHIGSYGYTADEVLYDWKDNALEISTLAKATMTQFNLMKWISQAETSITNRKIAAGFRNDSIASINFSFKRQYGFFLLQIYTPMFIIVMCSWVAFWIVKTD----APSRVSLGVASSLSVTKIGFAGKGKPNVEYPTALDIFIIICFMTVFLSLVEYALINYISVFISRYKAR--EKKELLARTKFGKLLSKRQKRHLLKQKDMMKTI--SQLTIENNP-----SDDENVKTKSAGTMTDNTPLKGVHF---KASTLEVS-----------KIAQRASDLI----FKFCETIERFLTLAITFISPKPVSQMYIYTHTEEALEKIDSLARKLFPLTFIFIMFSYILLYFYIL 945
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 196.438 bits (498), Expect = 2.025e-56 Identity = 101/279 (36.20%), Postives = 151/279 (54.12%), Query Frame = 0 Query: 91 GGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSR-PPVGYATAMDIFIILCFVSVFAALLEFAC 368 GG PL V +L+I S + E M +++ Y Q W D+RL ++ L L+ F IWVPDTF N + S+LH +T N+ VR++ +G ++Y R T C M LH +PLD+Q C + S+G D+V W + V ++ L QF +V +++ + R+ ++ SL F +R G+F+ Q Y P ILIV SWV+FW+ AR LG VL++ I G +S P + Y A+DI++++CFV VFAALLE+A Sbjct: 100 GGDPLYVGFDLTIASFDSISEVSMDYTITMYLNQYWKDERLSFSTEEDKVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWRQKPVVGVEDAQLPQFTIVGWET------NERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWI----NHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALLEYAA 368
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11") HSP 1 Score: 162.54 bits (410), Expect = 7.644e-44 Identity = 94/311 (30.23%), Postives = 159/311 (51.13%), Query Frame = 0 Query: 92 GPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSE---LALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDK-LGLAQFHLVNFKS--FTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSI-VNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFL--DLCIVRIKQREAEKAILLAAK 393 G V ++++ S+ ++E+ M ++ D +F QSW D RL+ SE L + W L IW PD+F N + +T+PN ++ ++ + + Y +LT+ CPMH +P DTQ C L S D+++ W + + +DK + L Q L++ KS T + + + T + + F F+R+ G++L Y P LIV SW++FW+ K VPAR LG ++L++ KS PPV Y A+D+F+ C V VF +L+E+A +N + D+ + K+ ++L + Sbjct: 18 GNATEVLFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLPDNMTSEYRLLPIEW--LEKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQTCNLEIESISHTTDDLIFTWDKEMPLDVDKGIELPQLELISTKSDDCTTVYSTGQFTCL--------EVVFKFKRRLGYYLFHTYVPTCLIVIMSWISFWI----KPEAVPARVTLGVTSLLTLSTQHANSQKSLPPVSYIKAIDVFMSGCTVFVFLSLMEYALVNIVMGDIADIEKKKSRGISNLILGTR 314
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5") HSP 1 Score: 157.147 bits (396), Expect = 1.232e-42 Identity = 86/262 (32.82%), Postives = 143/262 (54.58%), Query Frame = 0 Query: 94 PLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELA-LNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVS-IDKLGLAQFHLVNFKS-FTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSR-PPVGYATAMDIF 351 P + +N+ +R++ +++ M +S+ FR+ W D+RL+Y L L +W+PDTF N +++ H+I VPN +VRI+PNG + YS R+++ CPM L +PLD Q+C L S+G D++Y W E V + L L +F L +KS + D+ ++ S +E F+R+ ++L+ IY P ++V SWV+FWL + +PAR LG +L++ G ++ PPV Y A+D++ Sbjct: 39 PATINVNIYLRTISRIDDVKMEYSVQVTFREQWNDERLRYYDDTHGHLKYLTLTDPTKVWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYLWKEKDPVQVVPGLHLPRFTLEQYKSAYCDVTTNTGEY-------SCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQ----NAIPARVSLGVTTLLTMSTQTSGINAQLPPVSYTKAIDVW 289
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000006195 (supercontig:LSalAtl2s:LSalAtl2s339:168354:194952:-1 gene:EMLSAG00000006195 transcript:EMLSAT00000006195 description:"maker-LSalAtl2s339-augustus-gene-2.20") HSP 1 Score: 157.147 bits (396), Expect = 4.677e-42 Identity = 135/496 (27.22%), Postives = 211/496 (42.54%), Query Frame = 0 Query: 96 VVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVS--ELALNWQF-----------------------LAM-----IWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVS-IDKLGL-AQFHLVNFKSFT-DIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFG-GKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAA-------DP--AEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYL 548 +VT+N+ +RS +++ M +S RQ W D RL++ +S + +++ F L M +W+ DTF N + H I N +VR++PNG V YS R+++ C MHL FPLD Q C L S+G +D++Y+W E V + L L F L F + D++ ++ S +E F RQ F++L IY P +IV SW++FW+ VPAR LG +L++ S PPV Y A+D++ +C VF+ALLE+A +N+ + +A++A +++EAKE E + + + + D P+S V L D E + DP I+ +I P G E +V + I D C R + + + KID +R LFP F ++YW YL Sbjct: 75 LVTVNIFVRSFSNIDDVKMEYSFQITLRQQWNDGRLRFKDKLLSMEGIVIDFDFNIIPFYPDAASSGGLFQKDKIRYLTMTDSSKVWMXDTFFXNEKIGRFHNILQDNLYVRVFPNGDVLYSIRVSLTCACSMHLALFPLDKQTCNLDVASYGWTMNDLIYQWKETNPVQMVANLSLPGGFKLDGFTNHNCDVKXATGSY-------SCLRVEITFARQLSFYVLTIYIPCFMIVLVSWMSFWI----DHKAVPARVSLGITXLLAMSTTQASINSSLPPVAYTKAIDVWCGVCVTFVFSALLEYALVNY-------ASRSDAQRA------AKQKEAKERE-LEQCAFSTERIEDGGF----PLSMV---NRLPYDRTENMSHSHFLFKDPLMRRIEGAPMIPPGGLLQNEIPLQV--------RRNPISD--------WCQRFQFRAK--------------------KIDVISRFLFPSTFAFFNILYWSYYL 502
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000006968 (supercontig:LSalAtl2s:LSalAtl2s396:160743:177530:1 gene:EMLSAG00000006968 transcript:EMLSAT00000006968 description:"maker-LSalAtl2s396-augustus-gene-1.5") HSP 1 Score: 155.221 bits (391), Expect = 5.756e-42 Identity = 126/448 (28.12%), Postives = 191/448 (42.63%), Query Frame = 0 Query: 118 LDCYFRQSWVDKRLQYNATG-------VSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSI--DKLGLAQFHLV-------NFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSR-PPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYL 548 +DCYFRQ W +RL + + +L+LN + L IW PDT+ NG SY+H IT PN+ +RI +G ++YS RLTI A+CPM L FP+D Q CPL GS+ + Y+W + KL L+QF ++ NF TD R + GF S + +R TG+FL+QIY P LIV SWV FWL + R LG VL++ I ++ P +G +L+EF + DL I+ +++E E + A + V +++ P + SE++ E+ Q P P ++ + ++ + + + Q Y L E + + T+ +T KID A +LFP F + +YW SY Sbjct: 1 MDCYFRQYWRXERLSFTGLKNNTHHLKIDQLSLNVKMLEKIWKPDTYFHNGLSSYIHTITRPNKLLRISEHGDITYSMRLTIKAKCPMMLKSFPMDWQSCPLVLGSYAYTIDQVYYRWQHSSNAVAYEGKLKLSQFDIITTAYRSLNFSRNTDDRYTLPLVG-GF---SVLQVVIALQRHTGYFLIQIYLPCTLIVVLSWVGFWLNRE----ATSDRVGLGITTVLTLSTIALDSRTDLPKMGSGEVY-------------SLVEFP--HLADLQIIDEEEKELEGGW-------TDNALKHTVS---VISGFPNSATVQSFVTNTSELSPFEDFHQILPPPPPPPRSLN----LSTSQREVKSNGRGTSTMSQAQTQTETTTSCFKQFLYCLMSNQEYRKQK-----TKEATRMGSTNSTSKIDSVAXILFPVSFCLYNAVYWYSYF 406
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000010137 (supercontig:LSalAtl2s:LSalAtl2s66:38297:115963:1 gene:EMLSAG00000010137 transcript:EMLSAT00000010137 description:"snap_masked-LSalAtl2s66-processed-gene-1.3") HSP 1 Score: 151.369 bits (381), Expect = 3.380e-41 Identity = 90/263 (34.22%), Postives = 132/263 (50.19%), Query Frame = 0 Query: 114 MVFSLDCYFRQSWVDKRLQY-NATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSI---DKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFL 372 M + D Y RQ W D RL + + +LA + IW P+ F N +++ +TVPN +RI+PNG + Y RL + C M L ++PLDTQ+C + SF +++ +W +S+ L + QF + T I + N S EFH R GF L+Q Y P +LIV SWV+FW+ VPAR LG +L+ V+ G S P Y A+D+++ +C VFAAL+EF +N+L Sbjct: 1 MDYVTDTYLRQKWSDSRLSHPDIKSPLDLAXP-NLVKAIWKPEVFFPNAKEANFQFVTVPNVLIRIHPNGEILYILRLRLKFSCMMELSRYPLDTQICAMQISSFSKTTKELLLEWDPTHELSVTVAKDLRMPQFEM------TKITTNRCHETNHMGNYSCLVAEFHLHRSIGFHLIQSYLPSVLIVAISWVSFWM----DVDCVPARVTLGVITLLT-VSSQVSGTSVPQTSYVKAIDVWMGVCTAFVFAALVEFTLVNYL 251
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Match: EMLSAG00000002942 (supercontig:LSalAtl2s:LSalAtl2s168:571962:593342:-1 gene:EMLSAG00000002942 transcript:EMLSAT00000002942 description:"maker-LSalAtl2s168-augustus-gene-6.6") HSP 1 Score: 127.872 bits (320), Expect = 6.044e-32 Identity = 132/526 (25.10%), Postives = 212/526 (40.30%), Query Frame = 0 Query: 72 DHCDIHLDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSE-LALNW-QFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGS----------------------FGSDAHDIVYKWAEPRSVSIDK-LGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSR------PPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCD-----RIEMKLEAKYGP-----------ITESYVYN---NTTEVIWKIDEYARMLFPGVFLVLQMIYWISY 547 D D L + A+ G V I L +RS+G + + MV +D Y RQ W D RL N G+ E + LN + +W P+ + N + + +TVPN VRI P G + Y RL + C M L KFPLD Q C + S +++ +W + + + I K + + QF + S + +G N S + H +R GF ++Q Y P ILIV SWV+FW+ +V G + + K+ P V Y A+DI++ C +FAALLEF +N++ R K++ I ++I E + + E D V P+S++ E D +E A+ ++ + + T +VL + K +R L + + D + M +E G I ES + + ++ +IDE +R +FP F + ++YW Y Sbjct: 10 DILDSLLQNYDRRATPTNHIGKATEVAIKLYVRSLGSINPDTMV--IDLYLRQHWFDSRL--NHPGLLEPMDLNDPNLVKALWKPEVYFPNAKDAEFQYVTVPNVLVRIDPGGAILYMLRLKLKFSCMMELSKFPLDEQYCTMEIASCKIIIHKGIISTFKNHNFFSLIVSKTTKELILRWKDTKPIDISKEVKMPQFEI----STVIPSICQETFHIG--NYSCLLAQLHLKRSLGFHMVQSYIPTILIVVISWVSFWM---------DVESVAGRTTLGVTTLLTVSSKASDVQAEVPLVSYVKAIDIWMGACTAFIFAALLEFTFVNYM---WRRGKKKTMYFGIESGSRILENQKDKVE-------------DFLV----PLSQINE----DNEESCNQANNVAMERA---VKKSSTEVNRRGQVLLMKPTTKNRRKSNFLWKXSKSQGDDAERRTALNMDVEQSNGEVRMLKSSSDDLIKESSISEFGLSHCKLALQIDECSRFIFPLCFCIFNLLYWSYY 489
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|143811394|sp|P20237.2|GBRA4_BOVIN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 253.062 bits (645), Expect = 1.226e-75 Identity = 171/530 (32.26%), Postives = 250/530 (47.17%), Query Frame = 0 Query: 67 KLHPEDHC---DIHLDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAE--PRSVSIDK--LGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKA---ILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLIL--PEGETLEEAAEEVLEHRKEEKAKRSIPDLIS--------------QAFYRLCDRIEM---------KLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLMPMDKARSVM 560 KL PE+ D LD +N G GGP V ++ + S GPV + +M +++D +FRQ+W+DKRL+Y+ + L LN + +W PDTF NG+KS H +T PN+ RI NG + Y+ RLTI AECPM L FP+D CPL FGS+ +++Y W + +SV + K L Q+ L+ +SS + ++ FH R+ G+F++Q Y P I+ V S V+FW+ K VPARTV G VL++ + + S P V YATAMD FI +CF VF+AL+EFA +N+ + +R+ KA I A + E+ + P + ++ A+A V + V + N +E + P + AAE + R A S P F RI+ KL A P + T+ KID+YAR+LFP F M+YW+ YL M+K+ S+M Sbjct: 42 KLCPENFTRILDSLLDGYDNRL-RPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIG------QTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQMEKAKRKTSKAPQEISAAPVLREKHPETPLQNTNANLSMRKRANALVHSESDVGSRTDVGNHSSKSSTVVQGSSEATPQSYLASSPNPFSRANAAETISAARAIPSALPSTPSRTGYVPRQVPVGSASTQHVFGSRLQRIKTTVNSIGTSGKLSATTTPSAPPPSGSGTS----KIDKYARILFPVTFGAFNMVYWVVYLSKDTMEKSESLM 555
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|120763|sp|P28471.1|GBRA4_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 244.588 bits (623), Expect = 1.802e-72 Identity = 166/525 (31.62%), Postives = 246/525 (46.86%), Query Frame = 0 Query: 67 KLHPEDHC---DIHLDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAE--PRSVSIDK--LGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEV---------AEPENLDQDEPET------AADP---AEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGP-----ITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLMPMDKARSVM 560 KL PE+ D LD +N G GGP V ++ + S GPV + +M +++D +FRQ+W+DKRL+Y+ + L LN + +W PDTF NG+KS H +T PN+ RI NG + Y+ RLTI AECPM L FP+D CPL FGS+ +++Y W + +SV + K L Q+ L+ +SS + ++ FH R+ G+F++Q Y P I+ V S V+FW+ K VPARTV G VL++ + + S P V YATAMD FI +CF VF+AL+EFA +N+ ++ +++ K + K E + A + + T L S+V + Q+ ET A+ P + + + I L AA + RS AF RI+ + P + KID+YAR+LFP F M+YW+ YL M+K+ S+M Sbjct: 42 KLCPENFTRILDSLLDGYDNRL-RPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIG------QTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKKISKPPPEVPAAPVLKEKHTETSLQNTHANLNMRKRTNALVHSESDVNSRTEVGNHSSKTTAAQESSETTPKAHLASSPNPFSRANAAETISAAARGLSSAASPSPHGTLQPAPLRSAS--ARPAFGARLGRIKTTVNTTGVPGNVSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVVYLSKDTMEKSESLM 552
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|13959377|sp|Q9D6F4.1|GBRA4_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 244.588 bits (623), Expect = 2.199e-72 Identity = 163/527 (30.93%), Postives = 246/527 (46.68%), Query Frame = 0 Query: 67 KLHPEDHC---DIHLDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAE--PRSVSIDK--LGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPET---------------AADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQ-----AFYRLCDRIEMKLE--AKYGPITES---YVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLMPMDKARSVM 560 KL PE+ D LD +N G GGP V ++ + S GPV + +M +++D +FRQ+W+DKRL+Y+ + L LN + +W PDTF NG+KS H +T PN+ RI NG + Y+ RLTI AECPM L FP+D CPL FGS+ +++Y W + +SV + K L Q+ L+ +SS + ++ FH R+ G+F++Q Y P I+ V S V+FW+ K VPARTV G VL++ + + S P V YATAMD FI +CF VF+AL+EFA +N+ ++ +++ K + K E + A + + T L S+V + +T A+ P + ET+ AA + P + AF RI+ + G ++ + + KID+YAR+LFP F M+YW+ YL M+K+ S+M Sbjct: 42 KLCPENFTRILDSLLDGYDNRL-RPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIG------QTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMQKAKKKISKPPPEVPAAPVLKEKHTETSLQNTHANLNMRKRTNALVHSESDVKSRTEVGNHSSKTSAVQESSEATPKAHLASSPNPFSRAN----AAETMSAAARGLSSAASPSPHGTLRPASLGSASTRPAFGSRLGRIKTTVNTTGAAGNVSATPPPPAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVVYLSKDTMEKSESLM 552
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|206729865|sp|P48169.2|GBRA4_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-4; AltName: Full=GABA(A) receptor subunit alpha-4; Flags: Precursor) HSP 1 Score: 243.047 bits (619), Expect = 6.915e-72 Identity = 159/516 (30.81%), Postives = 242/516 (46.90%), Query Frame = 0 Query: 75 DIHLDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAE--PRSVSIDK--LGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAI--LLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAA------------------DPAEIDHVDLILPEGETLEEAAEEVLEH----RKEEKAKRSIPDLISQAFYRLCDRIE-MKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLMPMDKARSVM 560 D LD +N G GGP V ++ + S GPV + +M +++D +FRQ+W+DKRL+Y+ + L LN + +W PDTF NG+KS H +T PN+ RI NG + Y+ RLTI AECPM L FP+D CPL FGS+ +++Y W + +SV + K L Q+ L+ +SS + ++ FH R+ G+F++Q Y P I+ V S V+FW+ K VPARTV G VL++ + + S P V YATAMD FI +CF VF+AL+EFA +N+ + +R+ K + AA ++ E K PE + A + + T L S+V + +++ +P + + L A+ + RK S + R+ + + K + KID+YAR+LFP F M+YW+ YL M+K+ S+M Sbjct: 53 DSLLDGYDNRL-RPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGP-IEILRLNNMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFPMDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIG------QTVSSETIKSITGEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQMEKAKRKTSKPPQEVPAAPVQRE--KHPEAPLQNTNANLNMRKRTNALVHSESDVGNRTEVGNHSSKSSTVVQESSKGTPRSYLASSPNPFSRANAAETISAARALPSASPTSIRTGYMPRKASVGSASTRHVFGSRLQRIKTTVNTIGATGKLSATPPPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWVVYLSKDTMEKSESLM 554
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|126302548|sp|Q16445.2|GBRA6_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 235.343 bits (599), Expect = 5.598e-70 Identity = 150/477 (31.45%), Postives = 233/477 (48.85%), Query Frame = 0 Query: 89 GVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSE-LALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSI----DKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLMPMDKARSV 559 G GG V ++ + S GPV + +M +++D +FRQ+W D+RL++ G +E L+LN ++ IW PDTF NG+KS H +T PN+ RI NG + Y+ RLTI A+CPM L FP+D CPL FGS+ +I+Y W + S+ + L Q+ L+ +SS + ++ FH +R+ G+F++QIYTP I+ V S V+FW+ K VPARTV G VL++ + + S P V YATAMD FI +CF VF+AL+EFA +N+ ++ ++A++ AA PP +++ A +P E + V + P+ + H K+ S+P + S ++ R + P S + T+ KID+Y+R+LFP F ++YW+ YL M+ + SV Sbjct: 50 GFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFG--GPTEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIG------QTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYF----TNLQTQKAKRKAQFAA-------------------------------PPTVTISK-----------ATEPLEAEIV--LHPDSK----------YHLKKRITSLSLPIVSSSEANKVLTRAPILQSTPVTPPPLSPAFGGTS----KIDQYSRILFPVAFAGFNLVYWVVYLSKDTMEVSSSV 452
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|232127|sp|P30191.1|GBRA6_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 226.098 bits (575), Expect = 1.559e-66 Identity = 123/324 (37.96%), Postives = 184/324 (56.79%), Query Frame = 0 Query: 89 GVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSE-LALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSI----DKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAIL-LAAKIEEEEAKEPEVV 405 G GG V ++ + S GPV + +M +++D +FRQ+W D+RL++ G +E L+LN ++ IW PDTF NG+KS H +T PN+ R+ NG + Y+ RLTI A+CPM L FP+D CPL FGS+ +I+Y W + S+ + L Q+ L+ +SS + ++ FH +R+ G+F++QIYTP I+ V S V+FW+ K VPARTV G VL++ + + S P V YATAMD FI +CF VF+AL+EFA +N+ + +R+A+ A AK + E+ E E+V Sbjct: 50 GFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFK--GPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMHNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIG------QTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAERQAQTAAKPPVAKSKTTESLEAEIV 361
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|341941084|sp|P16305.3|GBRA6_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-6; AltName: Full=GABA(A) receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 226.098 bits (575), Expect = 1.902e-66 Identity = 127/355 (35.77%), Postives = 194/355 (54.65%), Query Frame = 0 Query: 89 GVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSE-LALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSI----DKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAIL-LAAKIEEEEAKEPEVV-------------SKLIMAAIPLADATVGLD 423 G GG V ++ + S GPV + +M +++D +FRQ+W D+RL++ G +E L+LN ++ IW PDTF NG+KS H +T PN+ R+ NG + Y+ RLTI A+CPM L FP+D CPL FGS+ +I+Y W + S+ + L Q+ L+ +SS + ++ FH +R+ G+F++QIYTP I+ V S V+FW+ K VPARTV G VL++ + + S P V YATAMD FI +CF VF+AL+EFA +N+ + +R+A+ A AK + E+ + E+V S L + +P ++A+ L Sbjct: 50 GFGGAVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFK--GPAEILSLNNLMVSKIWTPDTFFRNGKKSIAHNMTTPNKLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKTEIIYTWKKGPLYSVEVPEESSSLLQYDLIG------QTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQIYTPCIMTVILSQVSFWINKES----VPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAERQAQTAATPPVAKSKASESLQAEIVVHSDSKYHLKKRISSLTLPIVPSSEASKALS 392
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|462150|sp|P34904.1|GBRG4_CHICK (RecName: Full=Gamma-aminobutyric acid receptor subunit gamma-4; AltName: Full=GABA(A) receptor subunit gamma-4; Flags: Precursor) HSP 1 Score: 226.098 bits (575), Expect = 1.956e-66 Identity = 129/348 (37.07%), Postives = 194/348 (55.75%), Query Frame = 0 Query: 29 LIFLLLGPTGVDPSLGDIEEFGAIFQEHLKIDPT-MLWPKLHPEDHCDIHLDCQENEASE--EGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIG-FGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFL 372 L+ L LGP EE+ ++L I+ T +L PK D I +N ++ +G P + +++ + S+GPV M +++D +F Q+W D+RL++N+T + L LN ++ IW+PDTF N +++ H IT PN+ +RI+ +G+V Y+ RLTI AEC + L FP+DT CPL F S+G +IVY+W R SI+ + L F FT +R +S R G ++ F R+ G+F +Q Y P IL V SWV+FW+ K PART LG VL++ + K P V Y TAMD+F+ +CF+ VFAAL+E+A +N+L Sbjct: 7 LLCLALGPALRSARCESTEEYD---YDYLSINKTWVLTPKAQETDATQILNSLLKNYDNKLRPDIGIKPTFIDVDIYVNSIGPVSVIQMEYTIDIFFAQTWYDRRLRFNST-LKALTLNTNMVSRIWIPDTFFRNSKRADSHWITTPNQLLRIWNDGKVLYTLRLTIEAECLLQLQNFPMDTHSCPLVFSSYGYPREEIVYRW---RRYSIEVSDQRTWRLYQF-DFTGLRNTSEVLRTGAGEYMVMTVSFDLSRRMGYFAIQTYIPCILTVVLSWVSFWI----KRDSTPARTSLGITTVLTMTTLSTISRKHLPRVSYITAMDLFVSVCFIFVFAALMEYATLNYL 342
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|462149|sp|P34903.1|GBRA3_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3; AltName: Full=GABA(A) receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 223.402 bits (568), Expect = 4.010e-65 Identity = 147/479 (30.69%), Postives = 232/479 (48.43%), Query Frame = 0 Query: 75 DIHLDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKW--AEPRSVSIDKLG--LAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYL 548 D LD +N G+G V ++ + S GPV + DM +++D +FRQ+W D+RL+++ + L LN + IW PDTF NG+KS H +T PN+ +R+ NG + Y+ RLTI AECPMHL FP+D CPL FGS+ ++VY W + +SV + + G L Q+ L+ T+I SS V + FH +R+ G+F++Q Y P I+ V S V+FWL + VPARTV G VL++ + + S P V YATAMD FI +C+ VF+AL+EFA +N+ + ++ +A+ + K AK+ ++ P+ NL +D E T+ + A + S P +I+ +A Y + +S T + K+D+ +R++FP +F + ++YW +Y+ Sbjct: 72 DRLLDGYDNRL-RPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYV------VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE----SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKVPEALEMKKKTPAAPAKKTSTTFNIVGTTYPI------------------NLAKDT------------------EFSTISKGAAP---------SASSTPTIIASP------------KATY--VQDSPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWATYV 479
BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Match: gi|120759|sp|P10064.1|GBRA3_BOVIN (RecName: Full=Gamma-aminobutyric acid receptor subunit alpha-3; AltName: Full=GABA(A) receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 222.631 bits (566), Expect = 8.325e-65 Identity = 163/546 (29.85%), Postives = 257/546 (47.07%), Query Frame = 0 Query: 21 MSGALFHWLIFLLLGPTGVDPSLGDIEEFGAIFQEHLKIDPTMLWPKLHPE------DHCDIH-------LDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKW--AEPRSVSIDKLG--LAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYL 548 M+G +LI +L G TG +E + +K D L PK P+ D+ I LD +N G+G V ++ + S GPV + DM +++D +FRQ+W D+RL+++ + L LN + IW PDTF NG+KS H +T PN+ +R+ NG + Y+ RLTI AECPMHL FP+D CPL FGS+ ++VY W + +SV + + G L Q+ L+ T+I SS V + FH +R+ G+F++Q Y P I+ V S V+FWL + VPARTV G VL++ + + S P V YATAMD F+ +C+ VF+AL+EFA +N+ + ++ +A+ E + K P V +K + T P NL +D +A + +G ++ + + + IP TE+ YN+ + K+D+ +R++FP +F + ++YW +Y+ Sbjct: 11 MAGLGLLFLINILPGTTG------QVESRRQEPGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLDGYDNRL-RPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGP-MKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYV------VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRE----SVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWEGKKVPEAL-------EMKKKTPAVPTKKTSTTFNIVGTTY-----------PINLAKDTEFSA------------ISKGAAPSTSSTPTIIASPKTTCVQDIP-------------------------TETKTYNSVS----KVDKISRIIFPVLFAIFNLVYWATYV 479
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|1325322977|ref|XP_023343318.1| (gamma-aminobutyric acid receptor alpha-like isoform X2 [Eurytemora affinis] >gi|1325322979|ref|XP_023343320.1| gamma-aminobutyric acid receptor alpha-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 431.795 bits (1109), Expect = 3.483e-143 Identity = 236/487 (48.46%), Postives = 301/487 (61.81%), Query Frame = 0 Query: 106 MGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDK-LGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPA----------------EIDHVDLILPEGETLEEAAEEVLEHRKEEKAK-----------------------RSIPDLISQAFYRLCDRIEMKLEAKYGP-ITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLM 551 MGPV+EN +FSLDCYFRQ+W D+RL+YN TG++ELALNW FLA IW PDTF +NG++S+LHKITVPNRFVRI P+G+VSYSQRLTIWA CPM+L KFPLD+Q+C L GSFG D++YKW + +++SID + LAQFHL ++ I S RTR G RNDST ++F FERQTGFFLLQIYTPL LIVFCSWV+FWL+KT+KGGEVPART LGA VLSIVN+GFGGKS+P VGY+TAMDI+IILCFV+VFAAL+EFA INF+D I R + K +EEE K + + P+ D + + + + + +NL+ + + ID V +L E A E + + A R++ D F R ++ + KY I +Y +T VI+ ID +AR+LFP FL LQ IYW SYLY+ Sbjct: 1 MGPVDENKEIFSLDCYFRQTWTDERLRYNTTGLNELALNWAFLAKIWKPDTFFLNGKQSFLHKITVPNRFVRISPSGKVSYSQRLTIWAACPMNLRKFPLDSQICKLEIGSFGYTVEDVLYKW-QKKALSIDDGVSLAQFHLADWNYQEKIGYSGLRTREGLRNDSTVQIDFFFERQTGFFLLQIYTPLTLIVFCSWVSFWLVKTEKGGEVPARTALGATTVLSIVNLGFGGKSKPKVGYSTAMDIYIILCFVAVFAALVEFASINFIDTFIKRF------REWEKEEKKKEEEKKNQLKKESIRRSKSPIKDGEIKKEMKLEDNDKTKNLEDMKIKETEKEEEKIEEMELKEGGNVEHNIDQVSNMLRESPKPPHAKSECVSTISTQDACVSTEDGFEDIEDEEEENEVEAKCRTLLDSFVSWFDRKMEKSFKFIFRKYSKKIVHMEIYKDTLGVIYSIDSWARILFPLAFLFLQAIYWSSYLYIF 480
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|1325256141|ref|XP_023321281.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 389.808 bits (1000), Expect = 4.173e-125 Identity = 217/538 (40.33%), Postives = 310/538 (57.62%), Query Frame = 0 Query: 72 DHCDIHLD----CQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQ------REAEKAILLAAKIEEEEAKEP----------EVVSKLIMAAIPLADATVGLDPPVSE---------VAEPENLDQDEP----ETAADPAEID-----------HVDLI-LPEGETLEEAAEEVLEHRK--EEKAKRSIPDLI-SQAFYRLCDRIE------MKLEAKYGPITESYV------YNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLY 549 D DI LD ++ E + P+ V IN++IRSMGPV+E +FSLDCYFRQSW D RL++N TG+SEL L+WQFL IW PDT +NG+K YLHKITVPNRF+RI P+GRVSYSQRLT+W++CPM+L KFP D+Q C L GS+G + D+ Y+WA + VSID LGLAQ+H+ + + R+ GFR DS A L F F+RQ+GFFLL IY PL LIV CSWV+FW++KTD VP+R LG ++LS+ +GFGGK++P +GYATA+D++ I+CF FAALLEFA INF+D R+KQ +A K + + + P +SK P + T + ++E + P D +P TA+ P + + +D++ L + E E+ ++ R+ + K S+ ++I S+ + ++I ++++ + PI + Y T V+ +IDE +R+LFP F+++ IYW YLY Sbjct: 72 DTLDILLDKDRYNRQMRPPGENLDTSPVQVQINMAIRSMGPVDEVRELFSLDCYFRQSWTDTRLRFNTTGISELVLDWQFLTKIWKPDTTFLNGQKCYLHKITVPNRFIRISPSGRVSYSQRLTLWSKCPMYLGKFPFDSQSCSLEIGSYGYTSDDLTYEWAL-KPVSIDDLGLAQYHMTDLNYGVQTSPTKRKISSGFRTDSVAFLRFDFQRQSGFFLLGIYFPLTLIVMCSWVSFWIVKTD----VPSRVSLGVTSLLSVTKVGFGGKAKPQIGYATALDVYTIICFFFSFAALLEFALINFIDTYFKRLKQWEQDNPEQARKRRDRFKRASSDLSSPPTSGSVLPPDHSSISKSSPKMAPDSSTTTSVSLGLAESPALNTTSFIPTPGQHDLTDPTPGLHTASSPCQDETQCGLRYRKDVKLDILELSDQNGKESNIEDDIKSRESIQSSTKPSLTNIIYSEGMVAVLEKIRGYIHYLRRIKSSFFPIWRHFALEGELGYEETQYVVDRIDEISRILFPAGFMLISFIYWSYYLY 604
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|1325256122|ref|XP_023321250.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Eurytemora affinis] >gi|1325256126|ref|XP_023321258.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Eurytemora affinis] >gi|1325256131|ref|XP_023321267.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 389.808 bits (1000), Expect = 4.461e-125 Identity = 217/538 (40.33%), Postives = 310/538 (57.62%), Query Frame = 0 Query: 72 DHCDIHLD----CQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQ------REAEKAILLAAKIEEEEAKEP----------EVVSKLIMAAIPLADATVGLDPPVSE---------VAEPENLDQDEP----ETAADPAEID-----------HVDLI-LPEGETLEEAAEEVLEHRK--EEKAKRSIPDLI-SQAFYRLCDRIE------MKLEAKYGPITESYV------YNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLY 549 D DI LD ++ E + P+ V IN++IRSMGPV+E +FSLDCYFRQSW D RL++N TG+SEL L+WQFL IW PDT +NG+K YLHKITVPNRF+RI P+GRVSYSQRLT+W++CPM+L KFP D+Q C L GS+G + D+ Y+WA + VSID LGLAQ+H+ + + R+ GFR DS A L F F+RQ+GFFLL IY PL LIV CSWV+FW++KTD VP+R LG ++LS+ +GFGGK++P +GYATA+D++ I+CF FAALLEFA INF+D R+KQ +A K + + + P +SK P + T + ++E + P D +P TA+ P + + +D++ L + E E+ ++ R+ + K S+ ++I S+ + ++I ++++ + PI + Y T V+ +IDE +R+LFP F+++ IYW YLY Sbjct: 75 DTLDILLDKDRYNRQMRPPGENLDTSPVQVQINMAIRSMGPVDEVRELFSLDCYFRQSWTDTRLRFNTTGISELVLDWQFLTKIWKPDTTFLNGQKCYLHKITVPNRFIRISPSGRVSYSQRLTLWSKCPMYLGKFPFDSQSCSLEIGSYGYTSDDLTYEWAL-KPVSIDDLGLAQYHMTDLNYGVQTSPTKRKISSGFRTDSVAFLRFDFQRQSGFFLLGIYFPLTLIVMCSWVSFWIVKTD----VPSRVSLGVTSLLSVTKVGFGGKAKPQIGYATALDVYTIICFFFSFAALLEFALINFIDTYFKRLKQWEQDNPEQARKRRDRFKRASSDLSSPPTSGSVLPPDHSSISKSSPKMAPDSSTTTSVSLGLAESPALNTTSFIPTPGQHDLTDPTPGLHTASSPCQDETQCGLRYRKDVKLDILELSDQNGKESNIEDDIKSRESIQSSTKPSLTNIIYSEGMVAVLEKIRGYIHYLRRIKSSFFPIWRHFALEGELGYEETQYVVDRIDEISRILFPAGFMLISFIYWSYYLY 607
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|1325256144|ref|XP_023321290.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 389.423 bits (999), Expect = 4.775e-125 Identity = 217/538 (40.33%), Postives = 310/538 (57.62%), Query Frame = 0 Query: 72 DHCDIHLD----CQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQ------REAEKAILLAAKIEEEEAKEP----------EVVSKLIMAAIPLADATVGLDPPVSE---------VAEPENLDQDEP----ETAADPAEID-----------HVDLI-LPEGETLEEAAEEVLEHRK--EEKAKRSIPDLI-SQAFYRLCDRIE------MKLEAKYGPITESYV------YNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLY 549 D DI LD ++ E + P+ V IN++IRSMGPV+E +FSLDCYFRQSW D RL++N TG+SEL L+WQFL IW PDT +NG+K YLHKITVPNRF+RI P+GRVSYSQRLT+W++CPM+L KFP D+Q C L GS+G + D+ Y+WA + VSID LGLAQ+H+ + + R+ GFR DS A L F F+RQ+GFFLL IY PL LIV CSWV+FW++KTD VP+R LG ++LS+ +GFGGK++P +GYATA+D++ I+CF FAALLEFA INF+D R+KQ +A K + + + P +SK P + T + ++E + P D +P TA+ P + + +D++ L + E E+ ++ R+ + K S+ ++I S+ + ++I ++++ + PI + Y T V+ +IDE +R+LFP F+++ IYW YLY Sbjct: 70 DTLDILLDKDRYNRQMRPPGENLDTSPVQVQINMAIRSMGPVDEVRELFSLDCYFRQSWTDTRLRFNTTGISELVLDWQFLTKIWKPDTTFLNGQKCYLHKITVPNRFIRISPSGRVSYSQRLTLWSKCPMYLGKFPFDSQSCSLEIGSYGYTSDDLTYEWAL-KPVSIDDLGLAQYHMTDLNYGVQTSPTKRKISSGFRTDSVAFLRFDFQRQSGFFLLGIYFPLTLIVMCSWVSFWIVKTD----VPSRVSLGVTSLLSVTKVGFGGKAKPQIGYATALDVYTIICFFFSFAALLEFALINFIDTYFKRLKQWEQDNPEQARKRRDRFKRASSDLSSPPTSGSVLPPDHSSISKSSPKMAPDSSTTTSVSLGLAESPALNTTSFIPTPGQHDLTDPTPGLHTASSPCQDETQCGLRYRKDVKLDILELSDQNGKESNIEDDIKSRESIQSSTKPSLTNIIYSEGMVAVLEKIRGYIHYLRRIKSSFFPIWRHFALEGELGYEETQYVVDRIDEISRILFPAGFMLISFIYWSYYLY 602
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|1325256137|ref|XP_023321274.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 389.423 bits (999), Expect = 5.217e-125 Identity = 217/538 (40.33%), Postives = 310/538 (57.62%), Query Frame = 0 Query: 72 DHCDIHLD----CQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQ------REAEKAILLAAKIEEEEAKEP----------EVVSKLIMAAIPLADATVGLDPPVSE---------VAEPENLDQDEP----ETAADPAEID-----------HVDLI-LPEGETLEEAAEEVLEHRK--EEKAKRSIPDLI-SQAFYRLCDRIE------MKLEAKYGPITESYV------YNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLY 549 D DI LD ++ E + P+ V IN++IRSMGPV+E +FSLDCYFRQSW D RL++N TG+SEL L+WQFL IW PDT +NG+K YLHKITVPNRF+RI P+GRVSYSQRLT+W++CPM+L KFP D+Q C L GS+G + D+ Y+WA + VSID LGLAQ+H+ + + R+ GFR DS A L F F+RQ+GFFLL IY PL LIV CSWV+FW++KTD VP+R LG ++LS+ +GFGGK++P +GYATA+D++ I+CF FAALLEFA INF+D R+KQ +A K + + + P +SK P + T + ++E + P D +P TA+ P + + +D++ L + E E+ ++ R+ + K S+ ++I S+ + ++I ++++ + PI + Y T V+ +IDE +R+LFP F+++ IYW YLY Sbjct: 73 DTLDILLDKDRYNRQMRPPGENLDTSPVQVQINMAIRSMGPVDEVRELFSLDCYFRQSWTDTRLRFNTTGISELVLDWQFLTKIWKPDTTFLNGQKCYLHKITVPNRFIRISPSGRVSYSQRLTLWSKCPMYLGKFPFDSQSCSLEIGSYGYTSDDLTYEWAL-KPVSIDDLGLAQYHMTDLNYGVQTSPTKRKISSGFRTDSVAFLRFDFQRQSGFFLLGIYFPLTLIVMCSWVSFWIVKTD----VPSRVSLGVTSLLSVTKVGFGGKAKPQIGYATALDVYTIICFFFSFAALLEFALINFIDTYFKRLKQWEQDNPEQARKRRDRFKRASSDLSSPPTSGSVLPPDHSSISKSSPKMAPDSSTTTSVSLGLAESPALNTTSFIPTPGQHDLTDPTPGLHTASSPCQDETQCGLRYRKDVKLDILELSDQNGKESNIEDDIKSRESIQSSTKPSLTNIIYSEGMVAVLEKIRGYIHYLRRIKSSFFPIWRHFALEGELGYEETQYVVDRIDEISRILFPAGFMLISFIYWSYYLY 605
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|1009552478|ref|XP_015911721.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X4 [Parasteatoda tepidariorum]) HSP 1 Score: 320.472 bits (820), Expect = 1.025e-99 Identity = 183/501 (36.53%), Postives = 282/501 (56.29%), Query Frame = 0 Query: 60 DPTMLWPKLHPEDHCDIHLDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSI-DKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHF--ERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADAT-VGLDPPVSEVAEPENL---DQDEPETAADPAEIDHVDLILPEGETLEEAA--EEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLM 551 + T L L ED D + G GGP +V +++IRS GP+ E++ V+S+DCYFRQ+W D RL++ A EL+LNW+FL +W+PDTF NG+ SYLHK+TVPN+F+R+ P+G++ YS RLT+ A CPMHL K+PLDTQ CPL GS+ + D+ Y W ++VS+ + + L+Q+ VN I + RVG R D L HF R+ G+F+LQIY P +IV SWV+FW+ ++D G R +GA VL+IV +GFGG++R VG ATA+D F+I+CF VFAAL+E+A +N++D ++++ +K + +++ E+ K+ E + L T V +D + P+ D P T+ + V P+ +T + +++LE +K+ + +L+ A + R G E Y N + K+D YAR+LFP F +L ++YW +L+++ Sbjct: 13 NTTSLLDSLLSEDKYDRRI--------RPGFGGPAAIVETDINIRSFGPILESERVYSMDCYFRQTWYDSRLRFTA-AQEELSLNWKFLQKVWIPDTFFFNGKNSYLHKVTVPNKFIRLRPDGQLLYSMRLTVKASCPMHLRKYPLDTQACPLEIGSYAYPSQDVKYIW---KNVSLSEDVVLSQYEFVNI----SIISRTNTVRVGDREDQRTVLVVHFIIARRKGYFILQIYAPCAMIVGASWVSFWINRSDAAG----RVAVGATTVLTIVTMGFGGRAREKVGSATAIDWFVIMCFTFVFAALVEYAFVNYID----NYEKQQIKKQL----ELDREKKKKEEATNSLKRREYKKKFKTLVEMDREKKKKENPDGTTAESTDSPTTSQPSSGFSSVRFKEPDEKTTNSFSRDKQLLEQQKQ------LEELMQGAKLSIRRR---PFPLGRGLSLEKSPYRN-RHIASKVDSYARVLFPVSFGILNLLYWTLFLHIL 475
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|1009552470|ref|XP_015911718.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X1 [Parasteatoda tepidariorum] >gi|1009552473|ref|XP_015911719.1| gamma-aminobutyric acid receptor subunit alpha-6-like isoform X2 [Parasteatoda tepidariorum]) HSP 1 Score: 320.472 bits (820), Expect = 3.489e-99 Identity = 183/501 (36.53%), Postives = 282/501 (56.29%), Query Frame = 0 Query: 60 DPTMLWPKLHPEDHCDIHLDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSI-DKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHF--ERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADAT-VGLDPPVSEVAEPENL---DQDEPETAADPAEIDHVDLILPEGETLEEAA--EEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLM 551 + T L L ED D + G GGP +V +++IRS GP+ E++ V+S+DCYFRQ+W D RL++ A EL+LNW+FL +W+PDTF NG+ SYLHK+TVPN+F+R+ P+G++ YS RLT+ A CPMHL K+PLDTQ CPL GS+ + D+ Y W ++VS+ + + L+Q+ VN I + RVG R D L HF R+ G+F+LQIY P +IV SWV+FW+ ++D G R +GA VL+IV +GFGG++R VG ATA+D F+I+CF VFAAL+E+A +N++D ++++ +K + +++ E+ K+ E + L T V +D + P+ D P T+ + V P+ +T + +++LE +K+ + +L+ A + R G E Y N + K+D YAR+LFP F +L ++YW +L+++ Sbjct: 56 NTTSLLDSLLSEDKYDRRI--------RPGFGGPAAIVETDINIRSFGPILESERVYSMDCYFRQTWYDSRLRFTA-AQEELSLNWKFLQKVWIPDTFFFNGKNSYLHKVTVPNKFIRLRPDGQLLYSMRLTVKASCPMHLRKYPLDTQACPLEIGSYAYPSQDVKYIW---KNVSLSEDVVLSQYEFVNI----SIISRTNTVRVGDREDQRTVLVVHFIIARRKGYFILQIYAPCAMIVGASWVSFWINRSDAAG----RVAVGATTVLTIVTMGFGGRAREKVGSATAIDWFVIMCFTFVFAALVEYAFVNYID----NYEKQQIKKQL----ELDREKKKKEEATNSLKRREYKKKFKTLVEMDREKKKKENPDGTTAESTDSPTTSQPSSGFSSVRFKEPDEKTTNSFSRDKQLLEQQKQ------LEELMQGAKLSIRRR---PFPLGRGLSLEKSPYRN-RHIASKVDSYARVLFPVSFGILNLLYWTLFLHIL 518
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|1009552475|ref|XP_015911720.1| (gamma-aminobutyric acid receptor subunit alpha-6-like isoform X3 [Parasteatoda tepidariorum]) HSP 1 Score: 310.842 bits (795), Expect = 6.288e-96 Identity = 178/497 (35.81%), Postives = 273/497 (54.93%), Query Frame = 0 Query: 60 DPTMLWPKLHPEDHCDIHLDCQENEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSI-DKLGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHF--ERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEEAKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAA--EEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLM 551 + T L L ED D + G GGP +V +++IRS GP+ E++ V+S+DCYFRQ+W D RL++ A EL+LNW+FL +W+PDTF NG+ SYLHK+TVPN+F+R+ P+G++ YS RLT+ A CPMHL K+PLDTQ CPL GS+ + D+ Y W ++VS+ + + L+Q+ VN I + RVG R D L HF R+ G+F+LQIY P +IV SWV+FW+ ++D G R +GA VL+IV +GFGG++R VG ATA+D F+I+CF VFAAL+E+A +N++D ++++ +K + +++ E+ K+ E D P T+ + V P+ +T + +++LE +K+ + +L+ A + R G E Y N + K+D YAR+LFP F +L ++YW +L+++ Sbjct: 56 NTTSLLDSLLSEDKYDRRI--------RPGFGGPAAIVETDINIRSFGPILESERVYSMDCYFRQTWYDSRLRFTA-AQEELSLNWKFLQKVWIPDTFFFNGKNSYLHKVTVPNKFIRLRPDGQLLYSMRLTVKASCPMHLRKYPLDTQACPLEIGSYAYPSQDVKYIW---KNVSLSEDVVLSQYEFVNI----SIISRTNTVRVGDREDQRTVLVVHFIIARRKGYFILQIYAPCAMIVGASWVSFWINRSDAAG----RVAVGATTVLTIVTMGFGGRAREKVGSATAIDWFVIMCFTFVFAALVEYAFVNYID----NYEKQQIKKQL----ELDREKKKKEEAT--------------------------------DSPTTSQPSSGFSSVRFKEPDEKTTNSFSRDKQLLEQQKQ------LEELMQGAKLSIRRR---PFPLGRGLSLEKSPYRN-RHIASKVDSYARVLFPVSFGILNLLYWTLFLHIL 482
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|508083115|gb|AGN03794.1| (putative GABA-gated ion channel, partial [Ixodes scapularis]) HSP 1 Score: 308.531 bits (789), Expect = 2.031e-95 Identity = 183/474 (38.61%), Postives = 266/474 (56.12%), Query Frame = 0 Query: 83 NEASEEGVGGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNATGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGSFGSDAHDIVYKWAEPRSVSIDK-LGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASL--EFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGK-SRPPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEKAILLAAKIEEEE-AKEPEVVSKLIMAAIPLADATVGLDPPVSEVAEPENLDQDEPETAADPAEIDHVDLILPEGETLEEAAEEVLEHRKEEKAKRSIPDLISQAFYRLCDRIEMKLEAKYGPITESYVYNNTTEVIWKIDEYARMLFPGVFLVLQMIYWISYLYLM 551 N G GGPP + ++ IRS GPV EN+M+FS+DCYFRQ+W D+RL+++ + L+++WQFL +W PDT+ NG+ SYLHK+TVPN+FVR+ +GR+ YS RLTI A CPMHL K+PLDTQ CPL GSF + ++V+KW P+ V I + L+Q+ +N + T G + +SL F R+ G+F+LQIY P LIV SWVAFW+ ++D G R +GA VL++V +GFGG+ S P V YATA+D F+I+CF VF AL+E+AC+N+L+ ++ +++ EK LA + E +E AKE + G D +E A E++ E LI G LE+ L+ R + KR I Y+ C+ E + P +EV ++D +AR++FP F VL+++YW +LY + Sbjct: 40 NRQFRPGFGGPPTEILTDVLIRSFGPVSENEMMFSMDCYFRQTWYDRRLRFDG-DIKLLSVSWQFLEKVWTPDTYFFNGKSSYLHKVTVPNKFVRLRHDGRLKYSMRLTIKASCPMHLRKYPLDTQACPLEIGSFAYSSKEVVFKWKGPKPVDISSDVTLSQYEFLNIT-------VANLTTYGPAGEVRSSLMARFILSRRRGYFILQIYAPCSLIVGASWVAFWINRSDAAG----RVSVGATTVLTLVTMGFGGRASLPRVDYATALDWFVIMCFTFVFTALVEYACVNYLERFLMHRQRQRLEK---LAKQEERQELAKE--------------FNRESGTD---TENAGSEDIRLRLERAEEIEEERRRTRLI---GGCLEQ-----LQFRWRRRKKRPI--------YQPCNTAP---EERMTP----------SEVSAEVDAWARIIFPLTFTVLKVLYWTLFLYFV 452
BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Match: gi|1061470915|gb|ODM90107.1| (Gamma-aminobutyric acid receptor subunit alpha-6 [Orchesella cincta]) HSP 1 Score: 305.834 bits (782), Expect = 5.160e-95 Identity = 150/324 (46.30%), Postives = 206/324 (63.58%), Query Frame = 0 Query: 91 GGPPLVVTINLSIRSMGPVEENDMVFSLDCYFRQSWVDKRLQYNA--TGVSELALNWQFLAMIWVPDTFVVNGRKSYLHKITVPNRFVRIYPNGRVSYSQRLTIWAECPMHLHKFPLDTQMCPLHFGS----------------------FGSDAHDIVYKWAEPRSVSIDK---LGLAQFHLVNFKSFTDIRLSSRRTRVGFRNDSTASLEFHFERQTGFFLLQIYTPLILIVFCSWVAFWLIKTDKGGEVPARTVLGANAVLSIVNIGFGGKSR-PPVGYATAMDIFIILCFVSVFAALLEFACINFLDLCIVRIKQREAEK 386 GGPP+ + +N+ I+S+GPV E D V+S+DCYFRQ WVD RL++NA TG+SE ++NW FL +W PDT+ VNG+KSYLH ITVPN+F+R+ +G ++YS RLTI A CPMHL KFPLD+Q CPL GS +G +D++Y W + + + + LAQ+ L K+ +IRLSSRR N S ++ FH +R TG+F+LQ+Y P LIV CSWV+FW+ VPAR LG VLS+ +GFGG+S+ P YATA+D F+I+CF VFA+++E+A INFLD + + +K Sbjct: 59 GGPPVTIEVNMYIKSLGPVSETDEVYSMDCYFRQMWVDNRLKFNASATGLSEFSMNWLFLDKVWKPDTYFVNGKKSYLHSITVPNKFLRLRQDGLLTYSMRLTIKASCPMHLRKFPLDSQSCPLEIGSCKRELADDDHDEKASLSKFHLFYGYSNNDVLYAWFKSGKDPVGREEGVNLAQYDLTEIKTKEEIRLSSRRD-----NFSVVAVHFHLKRHTGYFMLQVYVPCTLIVSCSWVSFWI----DPQAVPARVSLGVTTVLSMTTLGFGGRSQMPRTSYATALDWFVIICFSFVFASMVEYAAINFLDKMTKDVAAKATKK 373 The following BLAST results are available for this feature:
BLAST of gamma-aminobutyric acid receptor alpha-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of gamma-aminobutyric acid receptor alpha-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of gamma-aminobutyric acid receptor alpha-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold691_size110934:20173..35608+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold691_size110934-processed-gene-0.1 ID=snap_masked-scaffold691_size110934-processed-gene-0.1|Name=gamma-aminobutyric acid receptor alpha-like|organism=Tigriopus kingsejongensis|type=gene|length=15436bp|location=Sequence derived from alignment at scaffold691_size110934:20173..35608+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'gamma-aminobutyric acid receptor alpha-like' has the following synonyms
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