vax1 transcription, snap_masked-scaffold295_size218279-processed-gene-1.11 (gene) Tigriopus kingsejongensis

Overview


Name	vax1 transcription
Unique Name	snap_masked-scaffold295_size218279-processed-gene-1.11
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000007689 (supercontig:LSalAtl2s:LSalAtl2s447:435167:439220:-1 gene:EMLSAG00000007689 transcript:EMLSAT00000007689 description:"maker-LSalAtl2s447-snap-gene-4.59")

HSP 1 Score: 164.851 bits (416), Expect = 1.995e-53
Identity = 79/101 (78.22%), Postives = 89/101 (88.12%), Query Frame = 0

Query:   28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFG-IPPTPYSPSFCTECYYKPGSCGSLHQGSLIP 127
            TTFTSDQTLRLE+EYQRNEYISRPRRFELAE LDLTETQIKIWFQNRRAKDKR EKA ID QYR +AFG +PP+ YS   C++CYYKPGSCG +H+G+ +P
Sbjct:   17 TTFTSDQTLRLEVEYQRNEYISRPRRFELAENLDLTETQIKIWFQNRRAKDKRXEKAHIDQQYRYIAFGSVPPSSYS-LLCSDCYYKPGSCGPIHRGTPLP 116

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000007002 (supercontig:LSalAtl2s:LSalAtl2s398:241587:243741:1 gene:EMLSAG00000007002 transcript:EMLSAT00000007002 description:"maker-LSalAtl2s398-snap-gene-2.6")

HSP 1 Score: 75.485 bits (184), Expect = 4.347e-17
Identity = 35/70 (50.00%), Postives = 49/70 (70.00%), Query Frame = 0

Query:   18 RKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQID 87
            RK    R+ RT FTS Q + LE +Y+  +Y+S   R E +  L +TETQ+KIWFQNRRAK KR+++A++D
Sbjct:  224 RKHRADRKPRTPFTSQQLMELENKYKEKQYLSISERAEFSAKLKITETQVKIWFQNRRAKTKRLQEAELD 293

HSP 2 Score: 67.0106 bits (162), Expect = 4.946e-14
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 0

Query:   18 RKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQID 87
            RK    R+ RT FT+ Q   LE ++ + +Y+S     E + +L LTETQ+KIWFQNRRAK KRI++++++
Sbjct:  128 RKHKPDRKPRTPFTNSQLAALEKKFSQKQYLSISEXAEFSCSLKLTETQVKIWFQNRRAKSKRIQESEME 197

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000005186 (supercontig:LSalAtl2s:LSalAtl2s273:538220:539897:1 gene:EMLSAG00000005186 transcript:EMLSAT00000005186 description:"maker-LSalAtl2s273-snap-gene-5.22")

HSP 1 Score: 71.2478 bits (173), Expect = 7.312e-17
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 0

Query:   20 DARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80
            + R++R RT FT+ Q   LE E++RN+Y+S  +R  L++ L+LTETQIKIWFQNRR K KR
Sbjct:   33 EDRKKRPRTAFTASQIKALETEFERNKYLSVSKRLFLSKNLNLTETQIKIWFQNRRTKWKR 93

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000002737 (supercontig:LSalAtl2s:LSalAtl2s158:121922:135190:-1 gene:EMLSAG00000002737 transcript:EMLSAT00000002737 description:"maker-LSalAtl2s158-augustus-gene-1.14")

HSP 1 Score: 73.9442 bits (180), Expect = 2.176e-16
Identity = 37/84 (44.05%), Postives = 47/84 (55.95%), Query Frame = 0

Query:   27 RTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSPSFCTEC 110
            RT FT+ Q   LE E+  N+Y++R RR E+A AL L ETQ+KIWFQNRR K K+  K  +              P+ PS   EC
Sbjct:  377 RTNFTTKQLTELEKEFHFNKYLTRARRIEIAGALQLNETQVKIWFQNRRMKQKKRMKEGL-------------IPHDPSLTGEC 447

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000000557 (supercontig:LSalAtl2s:LSalAtl2s108:680877:681989:-1 gene:EMLSAG00000000557 transcript:EMLSAT00000000557 description:"snap_masked-LSalAtl2s108-processed-gene-6.6")

HSP 1 Score: 69.707 bits (169), Expect = 2.531e-16
Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0

Query:   24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEK 83
            +RQRT++T  QTL LE E+  N Y++R RR E+A AL LTE QIKIWFQ RR K K+  K
Sbjct:   11 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQXRRMKWKKEHK 70

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000004821 (supercontig:LSalAtl2s:LSalAtl2s254:304065:306565:-1 gene:EMLSAG00000004821 transcript:EMLSAT00000004821 description:"maker-LSalAtl2s254-augustus-gene-3.28")

HSP 1 Score: 72.4034 bits (176), Expect = 5.910e-16
Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0

Query:   24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80
            RR RT FT +Q  RLE E+ +  YISRP+R ELA  L+L E  IK+WFQNRR KDKR
Sbjct:  134 RRYRTAFTREQIGRLEKEFLKENYISRPKRCELAAELNLPENTIKVWFQNRRMKDKR 190

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000004365 (supercontig:LSalAtl2s:LSalAtl2s229:92164:93864:1 gene:EMLSAG00000004365 transcript:EMLSAT00000004365 description:"maker-LSalAtl2s229-augustus-gene-1.9")

HSP 1 Score: 70.0922 bits (170), Expect = 2.156e-15
Identity = 32/63 (50.79%), Postives = 45/63 (71.43%), Query Frame = 0

Query:   20 DARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIE 82
            +++ RR+RT FTS+Q L LE E+   +Y+S   R  +A  L L+E Q+KIWFQNRRAK KR++
Sbjct:  179 NSKSRRRRTAFTSEQLLELEKEFHSKKYLSLSERSSIAHNLRLSEVQVKIWFQNRRAKWKRVK 241

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000009086 (supercontig:LSalAtl2s:LSalAtl2s570:267122:268618:-1 gene:EMLSAG00000009086 transcript:EMLSAT00000009086 description:"augustus_masked-LSalAtl2s570-processed-gene-1.5")

HSP 1 Score: 70.0922 bits (170), Expect = 3.122e-15
Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 0

Query:   18 RKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPY 102
            RK    R+ RT FT+ Q   LE ++++ +Y+S   R E + +L LTETQ+KIWFQNRRAK KR+++++++ + R  +  + P PY
Sbjct:  192 RKHKPXRKPRTPFTTQQLSALEKKFRQKQYLSIAERAEFSASLKLTETQVKIWFQNRRAKSKRLQESELE-RLRIASSPLLPRPY 275

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000010592 (supercontig:LSalAtl2s:LSalAtl2s704:428566:452407:-1 gene:EMLSAG00000010592 transcript:EMLSAT00000010592 description:"maker-LSalAtl2s704-augustus-gene-4.20")

HSP 1 Score: 67.781 bits (164), Expect = 3.274e-15
Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 0

Query:   22 RQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAK 77
            R +R RT FT DQ  R+E E+Q+ +Y+  P R  LA +L+LTE Q+K+WFQNRR K
Sbjct:   76 RNKRARTIFTPDQLERMEQEFQKQQYVVGPERLYLAASLNLTEAQVKVWFQNRRIK 131

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BLAST of vax1 transcription vs. L. salmonis genes
Match: EMLSAG00000004485 (supercontig:LSalAtl2s:LSalAtl2s233:93944:109965:1 gene:EMLSAG00000004485 transcript:EMLSAT00000004485 description:"augustus_masked-LSalAtl2s233-processed-gene-1.0")

HSP 1 Score: 69.707 bits (169), Expect = 4.568e-15
Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0

Query:   20 DARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80
            +  +RR R T+T  QTL LE E+  N Y++R RR E+A  L LTE QIKIWFQNRR K K+
Sbjct:  222 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHQLCLTERQIKIWFQNRRMKLKK 282

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BLAST of vax1 transcription vs. SwissProt
Match: gi|261260077|sp|P18264.2|ROUGH_DROVI (RecName: Full=Homeobox protein rough)

HSP 1 Score: 113.62 bits (283), Expect = 8.810e-30
Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 0

Query:   28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFG 96
            TTF+++QTLRLE+E+ RNEYISR RRFELAE L L+ETQIKIWFQNRRAKDKRIEKAQID  YR     
Sbjct:  169 TTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLSETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVA 237

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BLAST of vax1 transcription vs. SwissProt
Match: gi|14286139|sp|P10181.4|ROUGH_DROME (RecName: Full=Homeobox protein rough)

HSP 1 Score: 113.62 bits (283), Expect = 1.082e-29
Identity = 53/69 (76.81%), Postives = 58/69 (84.06%), Query Frame = 0

Query:   28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFG 96
            TTF+++QTLRLE+E+ RNEYISR RRFELAE L LTETQIKIWFQNRRAKDKRIEKAQID  YR     
Sbjct:  196 TTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVA 264

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BLAST of vax1 transcription vs. SwissProt
Match: gi|259016336|sp|P50219.3|MNX1_HUMAN (RecName: Full=Motor neuron and pancreas homeobox protein 1; AltName: Full=Homeobox protein HB9)

HSP 1 Score: 83.9593 bits (206), Expect = 1.609e-18
Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 0

Query:   24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQ 85
            RR RT FTS Q L LE +++ N+Y+SRP+RFE+A +L LTETQ+KIWFQNRR K KR +KA+
Sbjct:  242 RRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAK 303

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BLAST of vax1 transcription vs. SwissProt
Match: gi|341940962|sp|Q9QZW9.2|MNX1_MOUSE (RecName: Full=Motor neuron and pancreas homeobox protein 1; AltName: Full=Homeobox protein HB9)

HSP 1 Score: 83.5741 bits (205), Expect = 2.503e-18
Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 0

Query:   24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQ 85
            RR RT FTS Q L LE +++ N+Y+SRP+RFE+A +L LTETQ+KIWFQNRR K KR +KA+
Sbjct:  242 RRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKRSKKAK 303

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BLAST of vax1 transcription vs. SwissProt
Match: gi|12231013|sp|Q03828.2|EVX2_HUMAN (RecName: Full=Homeobox even-skipped homolog protein 2; AltName: Full=EVX-2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.748e-18
Identity = 48/97 (49.48%), Postives = 57/97 (58.76%), Query Frame = 0

Query:   24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSPSFCTECYYKPGSCGSL 120
            RR RT FT +Q  RLE E+ R  Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR        Q   +++   P P  PSF T       + GSL
Sbjct:  189 RRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR--------QRLAMSW---PHPADPSFYTYMMTHAAATGSL 274

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BLAST of vax1 transcription vs. SwissProt
Match: gi|1706722|sp|P49749.1|EVX2_MOUSE (RecName: Full=Homeobox even-skipped homolog protein 2; AltName: Full=EVX-2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.824e-18
Identity = 48/97 (49.48%), Postives = 57/97 (58.76%), Query Frame = 0

Query:   24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSPSFCTECYYKPGSCGSL 120
            RR RT FT +Q  RLE E+ R  Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR        Q   +++   P P  PSF T       + GSL
Sbjct:  192 RRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR--------QRLAMSW---PHPADPSFYTYMMTHAAATGSL 277

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BLAST of vax1 transcription vs. SwissProt
Match: gi|21903413|sp|P17487.2|HM12_CAEEL (RecName: Full=Homeobox protein ceh-12)

HSP 1 Score: 79.337 bits (194), Expect = 5.408e-18
Identity = 35/60 (58.33%), Postives = 48/60 (80.00%), Query Frame = 0

Query:   21 ARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80
             + RR RT F+S+Q ++LE ++  N Y+SRPRR++LA+ L L+ETQIKIWFQNRR K+KR
Sbjct:  108 GKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR 167

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BLAST of vax1 transcription vs. SwissProt
Match: gi|1352398|sp|P49640.1|EVX1_HUMAN (RecName: Full=Homeobox even-skipped homolog protein 1; AltName: Full=EVX-1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.397e-18
Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 0

Query:   22 RQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80
            + RR RT FT +Q  RLE E+ R  Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR
Sbjct:  182 QMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR 240

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BLAST of vax1 transcription vs. SwissProt
Match: gi|14916562|sp|Q9IA18.1|EVX2_HETFR (RecName: Full=Homeobox even-skipped homolog protein 2; AltName: Full=EVX-2)

HSP 1 Score: 82.0333 bits (201), Expect = 9.076e-18
Identity = 48/97 (49.48%), Postives = 57/97 (58.76%), Query Frame = 0

Query:   24 RRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSPSFCTECYYKPGSCGSL 120
            RR RT FT +Q  RLE E+ R  Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR        Q   +++   P P  PSF T       + GSL
Sbjct:  180 RRYRTAFTREQIGRLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR--------QRLAMSW---PHPADPSFYTYMMTHAAATGSL 265

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BLAST of vax1 transcription vs. SwissProt
Match: gi|119664|sp|P23683.1|EVX1_MOUSE (RecName: Full=Homeobox even-skipped homolog protein 1; AltName: Full=EVX-1)

HSP 1 Score: 82.0333 bits (201), Expect = 9.443e-18
Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 0

Query:   22 RQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKR 80
            + RR RT FT +Q  RLE E+ R  Y+SRPRR ELA AL+L ET IK+WFQNRR KDKR
Sbjct:  182 QMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR 240

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BLAST of vax1 transcription vs. nr
Match: gi|1009569326|ref|XP_015916905.1| (homeobox protein rough-like [Parasteatoda tepidariorum])

HSP 1 Score: 152.91 bits (385), Expect = 8.138e-43
Identity = 78/116 (67.24%), Postives = 87/116 (75.00%), Query Frame = 0

Query:   28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFG-------IPPTPYS---PSFCTECYYKPGSCGSLHQGSLIPSPLASS 133
            TTFTS+QTLRLE+EY RNEYISRPRRFELAE+LDLTETQIKIWFQNRRAKDKRIEKAQ+D Q+RC+A          PPT  S   PSFC  CYYKPG+   L   S  PS + +S
Sbjct:  180 TTFTSEQTLRLEMEYHRNEYISRPRRFELAESLDLTETQIKIWFQNRRAKDKRIEKAQMDQQFRCMALANSLGSLYAPPTSTSGVCPSFCGTCYYKPGTSPLLSSPSATPSSMLTS 295

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BLAST of vax1 transcription vs. nr
Match: gi|1316159079|ref|XP_023224684.1| (homeobox protein rough-like isoform X1 [Centruroides sculpturatus])

HSP 1 Score: 152.14 bits (383), Expect = 1.838e-42
Identity = 77/117 (65.81%), Postives = 85/117 (72.65%), Query Frame = 0

Query:   28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGI-------PP-----TPYSPSFCTECYYKPGSCGSLHQGSLIPSPLAS 132
            TTFTS+QTLRLE+EY RNEYISRPRRFELAE+LDLTETQIKIWFQNRRAKDKRIEKAQ+D QYRC+A          PP     +P  P+FC  CYYKP +   L   S  PS L S
Sbjct:  179 TTFTSEQTLRLEMEYHRNEYISRPRRFELAESLDLTETQIKIWFQNRRAKDKRIEKAQMDQQYRCMALATTLGSLYSPPAASTSSPVCPAFCGTCYYKPTATTLLPSSSTTPSILTS 295

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BLAST of vax1 transcription vs. nr
Match: gi|1238898583|ref|XP_022235748.1| (homeobox protein rough-like, partial [Limulus polyphemus])

HSP 1 Score: 143.665 bits (361), Expect = 3.034e-41
Identity = 71/101 (70.30%), Postives = 76/101 (75.25%), Query Frame = 0

Query:   28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSP------------SFCTECYYKPGS 116
            TTFTS+QTLRLE+EY RNEYISRPRRFELAE LDLTETQIKIWFQNRRAKDKRIEKAQ+D QYRC+A      P+ P             FC  CYYKPGS
Sbjct:   15 TTFTSEQTLRLEMEYHRNEYISRPRRFELAENLDLTETQIKIWFQNRRAKDKRIEKAQMDQQYRCMALANSLGPFYPPGGGAVGNLSCSPFCGACYYKPGS 115

[Close]

BLAST of vax1 transcription vs. nr
Match: gi|241570515|ref|XP_002402803.1| (Vax1 transcription factor, putative [Ixodes scapularis] >gi|215500122|gb|EEC09616.1| Vax1 transcription factor, putative [Ixodes scapularis])

HSP 1 Score: 143.28 bits (360), Expect = 1.238e-40
Identity = 72/109 (66.06%), Postives = 79/109 (72.48%), Query Frame = 0

Query:   28 TTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF-----------------GIPPTPYSPSFCTECYYKPGSCGS 119
            TTFTS+QTLRLELEYQR+EYISRPRRFELAE+L+LTETQIKIWFQNRRAKDKRIEKAQ+D QYRCLA                  G P +     FC  CY+KPG  GS
Sbjct:   30 TTFTSEQTLRLELEYQRSEYISRPRRFELAESLELTETQIKIWFQNRRAKDKRIEKAQLDQQYRCLALASGLGSLCSGGGVPAPHGTPGSGAVQPFCGACYFKPGQVGS 138

[Close]

BLAST of vax1 transcription vs. nr
Match: gi|585693106|ref|XP_006821574.1| (PREDICTED: homeobox protein rough-like [Saccoglossus kowalevskii] >gi|960885120|gb|ALR88651.1| homeobox protein rough-like mw [Saccoglossus kowalevskii])

HSP 1 Score: 143.28 bits (360), Expect = 3.139e-39
Identity = 66/101 (65.35%), Postives = 77/101 (76.24%), Query Frame = 0

Query:   26 QRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYS------PSFCTECYYKPGSCGSL 120
            QRTTFTS+QTL+LE+EY R EYI+RPRRFELAE LDLTE QIKIWFQNRRAKDKRIEKAQ+D  YRC+    P + YS       +FC  CYYKP +  ++
Sbjct:  157 QRTTFTSEQTLKLEMEYHRTEYITRPRRFELAEMLDLTENQIKIWFQNRRAKDKRIEKAQMDQHYRCMGLAPPGSAYSLGSAYPGAFCGACYYKPTTATAV 257

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BLAST of vax1 transcription vs. nr
Match: gi|780117841|ref|XP_011677478.1| (PREDICTED: homeobox protein HB1-like [Strongylocentrotus purpuratus])

HSP 1 Score: 144.05 bits (362), Expect = 1.250e-38
Identity = 74/112 (66.07%), Postives = 84/112 (75.00%), Query Frame = 0

Query:   13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTP-----YSPSF---CTECYYKPGS 116
            + R+RRK+ RQRRQRTTFTS+QT++LE+EY R EYI+R RR ELAE L LTETQIKIWFQNRRAKDKRIEKAQID QYR L     PTP     +SP+F   C  C Y P S
Sbjct:  237 LGRKRRKENRQRRQRTTFTSEQTIKLEMEYHRTEYITRMRRVELAEMLSLTETQIKIWFQNRRAKDKRIEKAQIDQQYRSLGL---PTPGSMCGFSPAFTGLCGPCCYCPTS 345

[Close]

BLAST of vax1 transcription vs. nr
Match: gi|170030550|ref|XP_001843151.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167867827|gb|EDS31210.1| conserved hypothetical protein [Culex quinquefasciatus])

HSP 1 Score: 138.658 bits (348), Expect = 1.382e-38
Identity = 69/97 (71.13%), Postives = 80/97 (82.47%), Query Frame = 0

Query:   12 RMARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCL-AFGIPPTPYSPSFC 107
            R+ARRR+K+ R RRQRTTF+S+QTLRLE+E+ RNEYISR RRFELAE L L+ETQIKIWFQNRRAKDKRIEKAQID QYR   A     TP++P + 
Sbjct:   58 RLARRRKKEGRPRRQRTTFSSEQTLRLEVEFHRNEYISRGRRFELAEVLKLSETQIKIWFQNRRAKDKRIEKAQIDQQYRTFAAVNGLFTPFNPQYT 154

[Close]

BLAST of vax1 transcription vs. nr
Match: gi|108868307|gb|EAT32532.1| (AAEL015355-PA [Aedes aegypti])

HSP 1 Score: 136.346 bits (342), Expect = 3.101e-38
Identity = 68/92 (73.91%), Postives = 77/92 (83.70%), Query Frame = 0

Query:   13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAFGIPPTPYSP 104
            +ARRR+K+ R RRQRTTF+S+QTLRLE+E+ RNEYISR RRFELAE L L+ETQIKIWFQNRRAKDKRIEKAQID QYR  AF      +SP
Sbjct:    5 LARRRKKEGRPRRQRTTFSSEQTLRLEVEFHRNEYISRGRRFELAEILKLSETQIKIWFQNRRAKDKRIEKAQIDQQYR--AFAAVNGLFSP 94

[Close]

BLAST of vax1 transcription vs. nr
Match: gi|755958848|ref|XP_011304204.1| (PREDICTED: homeobox protein rough [Fopius arisanus])

HSP 1 Score: 140.584 bits (353), Expect = 4.216e-38
Identity = 74/118 (62.71%), Postives = 85/118 (72.03%), Query Frame = 0

Query:   13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLAF--GIPPTP-YSPSFCTECYYKPGSCGSLHQGSLIP 127
            +ARRRRK+ + RRQRTTF+ +QT RLE EY R EYISR RRFELA +L LTETQIKIWFQNRRAKDKRIEKAQ+D QYR  A   G+   P Y+ SFC  C YK    G +   + IP
Sbjct:  130 LARRRRKEGKPRRQRTTFSGEQTARLEFEYHRGEYISRGRRFELASSLRLTETQIKIWFQNRRAKDKRIEKAQLDQQYRNFAVSNGLVNFPVYNSSFCGLCIYKDSGRGLVGPHTCIP 247

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BLAST of vax1 transcription vs. nr
Match: gi|1121150762|ref|XP_019562316.1| (PREDICTED: homeobox protein rough-like [Aedes albopictus])

HSP 1 Score: 135.576 bits (340), Expect = 5.104e-38
Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 0

Query:   13 MARRRRKDARQRRQRTTFTSDQTLRLELEYQRNEYISRPRRFELAEALDLTETQIKIWFQNRRAKDKRIEKAQIDHQYRCLA 94
            +ARRR+K+ R RRQRTTF+S+QTLRLE+E+ RNEYISR RRFELAE L L+ETQIKIWFQNRRAKDKRIEKAQID QYR  A
Sbjct:    9 LARRRKKEGRPRRQRTTFSSEQTLRLEVEFHRNEYISRGRRFELAEILKLSETQIKIWFQNRRAKDKRIEKAQIDQQYRAFA 90

The following BLAST results are available for this feature:

BLAST of vax1 transcription vs. L. salmonis genes
BLAST of vax1 transcription vs. SwissProt
BLAST of vax1 transcription vs. nr

BLAST of vax1 transcription vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000007689	1.995e-53	78.22	supercontig:LSalAtl2s:LSalAtl2s447:435167:439220:-...	[more]
EMLSAG00000007002	4.347e-17	50.00	supercontig:LSalAtl2s:LSalAtl2s398:241587:243741:1...	[more]
EMLSAG00000005186	7.312e-17	55.74	supercontig:LSalAtl2s:LSalAtl2s273:538220:539897:1...	[more]
EMLSAG00000002737	2.176e-16	44.05	supercontig:LSalAtl2s:LSalAtl2s158:121922:135190:-...	[more]
EMLSAG00000000557	2.531e-16	58.33	supercontig:LSalAtl2s:LSalAtl2s108:680877:681989:-...	[more]
EMLSAG00000004821	5.910e-16	61.40	supercontig:LSalAtl2s:LSalAtl2s254:304065:306565:-...	[more]
EMLSAG00000004365	2.156e-15	50.79	supercontig:LSalAtl2s:LSalAtl2s229:92164:93864:1 g...	[more]
EMLSAG00000009086	3.122e-15	42.35	supercontig:LSalAtl2s:LSalAtl2s570:267122:268618:-...	[more]
EMLSAG00000010592	3.274e-15	53.57	supercontig:LSalAtl2s:LSalAtl2s704:428566:452407:-...	[more]
EMLSAG00000004485	4.568e-15	55.74	supercontig:LSalAtl2s:LSalAtl2s233:93944:109965:1 ...	[more]

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BLAST of vax1 transcription vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|261260077\|sp\|P18264.2\|ROUGH_DROVI	8.810e-30	75.36	RecName: Full=Homeobox protein rough	[more]
gi\|14286139\|sp\|P10181.4\|ROUGH_DROME	1.082e-29	76.81	RecName: Full=Homeobox protein rough	[more]
gi\|259016336\|sp\|P50219.3\|MNX1_HUMAN	1.609e-18	62.90	RecName: Full=Motor neuron and pancreas homeobox p...	[more]
gi\|341940962\|sp\|Q9QZW9.2\|MNX1_MOUSE	2.503e-18	62.90	RecName: Full=Motor neuron and pancreas homeobox p...	[more]
gi\|12231013\|sp\|Q03828.2\|EVX2_HUMAN	2.748e-18	49.48	RecName: Full=Homeobox even-skipped homolog protei...	[more]
gi\|1706722\|sp\|P49749.1\|EVX2_MOUSE	2.824e-18	49.48	RecName: Full=Homeobox even-skipped homolog protei...	[more]
gi\|21903413\|sp\|P17487.2\|HM12_CAEEL	5.408e-18	58.33	RecName: Full=Homeobox protein ceh-12	[more]
gi\|1352398\|sp\|P49640.1\|EVX1_HUMAN	7.397e-18	64.41	RecName: Full=Homeobox even-skipped homolog protei...	[more]
gi\|14916562\|sp\|Q9IA18.1\|EVX2_HETFR	9.076e-18	49.48	RecName: Full=Homeobox even-skipped homolog protei...	[more]
gi\|119664\|sp\|P23683.1\|EVX1_MOUSE	9.443e-18	64.41	RecName: Full=Homeobox even-skipped homolog protei...	[more]

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BLAST of vax1 transcription vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1009569326\|ref\|XP_015916905.1\|	8.138e-43	67.24	homeobox protein rough-like [Parasteatoda tepidari...	[more]
gi\|1316159079\|ref\|XP_023224684.1\|	1.838e-42	65.81	homeobox protein rough-like isoform X1 [Centruroid...	[more]
gi\|1238898583\|ref\|XP_022235748.1\|	3.034e-41	70.30	homeobox protein rough-like, partial [Limulus poly...	[more]
gi\|241570515\|ref\|XP_002402803.1\|	1.238e-40	66.06	Vax1 transcription factor, putative [Ixodes scapul...	[more]
gi\|585693106\|ref\|XP_006821574.1\|	3.139e-39	65.35	PREDICTED: homeobox protein rough-like [Saccogloss...	[more]
gi\|780117841\|ref\|XP_011677478.1\|	1.250e-38	66.07	PREDICTED: homeobox protein HB1-like [Strongylocen...	[more]
gi\|170030550\|ref\|XP_001843151.1\|	1.382e-38	71.13	conserved hypothetical protein [Culex quinquefasci...	[more]
gi\|108868307\|gb\|EAT32532.1\|	3.101e-38	73.91	AAEL015355-PA [Aedes aegypti]	[more]
gi\|755958848\|ref\|XP_011304204.1\|	4.216e-38	62.71	PREDICTED: homeobox protein rough [Fopius arisanus...	[more]
gi\|1121150762\|ref\|XP_019562316.1\|	5.104e-38	79.27	PREDICTED: homeobox protein rough-like [Aedes albo...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold295_size218279	supercontig	scaffold295_size218279:140771..143561 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	F:sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold295_size218279-processed-gene-1.11-mRNA-1	snap_masked-scaffold295_size218279-processed-gene-1.11-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold295_size218279:140771..143561-

gene from alignment at scaffold295_size218279:140771..143561-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold295_size218279-processed-gene-1.11 ID=snap_masked-scaffold295_size218279-processed-gene-1.11|Name=vax1 transcription|organism=Tigriopus kingsejongensis|type=gene|length=2791bp|location=Sequence derived from alignment at scaffold295_size218279:140771..143561- (Tigriopus kingsejongensis)
ATGGCTAGCAGTGGCTTTGGACGGGCCAAACCGAGAAGTAAATCAACCCA
TCAAAATTGGTATTAGGCTTGACCAAGATAGTAGTTGATTTGGGGTTCCC
TGCCATTGTTCATGTCCGAAAGAGAAAGATACCAGCCCACGTGATCGACT
CTTGGATGGCCAGGAACTGCGCTCCAGAGGGTTAGGATCCTCCTAAGAGA
GCTGAACCATTTTGAGGGACTGGAGTCAACATGGGTTAGACTTAGGTCTC
TCCTGAATGAGATTATCACCCTTTAGACAAGACTAAAACCGTATTTTGTA
CAAACCAACAAGAGTGATAAACGAAAAGAGTGCAGTGTTATGCAACAGAA
ATCAATTCAATGACAAGCTGGGAAAAATGTATGTTCTATTTGATGTTGGC
ATGATCATTCCTTACATCCAACTGCAAAGGAGTATACAGACAGATTTTAA
CCGTGATGTCGCTTCCCCTCCCGATTGTCAGGTTGTCAAGCATTGCAAGT
ACGTAAATCAATATTAATAGCAATGTTTTGAATCTCTCTGCTTTCCAGCA
TTTTTCGAAAACATGATTAGTGCTTTAAAAACATATGAGGACTGTAAAAG
AGCTAAAATGGTTTCATTCGTTGGTTAAATCAAAGGTTATAACCATCCCC
TCCCCCCACAAGCTGTTCTTTCTAGAGCTTAAGCCTACTACGGAGCTATT
GCTCAAAAATATAAATGTGGAATAATGCAGACCCACCTTGAGAGGAGGAT
GGACGTCCAATGCATTTTCGGGTACCTTTGTAATTAAAGGCTGCTACAAC
AGAGCAATAACAAGATGGCAGGTTTGCTTCAAGGCTCATATATAGCTGTT
GAAAAATCCACTTCCACAGAGACACAAATTGGCCCTCGATTGTAGAAAAA
TCAGAATACATCGAGCGTCATAGTCTCCAACACTGGCTGATGATCAAGTC
ATTTTGGCTGTTGATCATAATATAACATACGTATCTCAACTGAAGAGTGA
ACGTCTTATCGCAATTTAAAAAGGTAGGAGGGATTTCGGCGTAGGCTGGA
CCAATTGATTGGCAGAATACTTGTTCAAAAGCTGGACTGGGAACAAGATT
ATTATTATGTACGCTGGCCTTTTTGTGGAGCCATGCCTTGGATTTAGCCA
TTCGATGAGAGGTTCCATTGTGAGATGTGTTCCATTTTACTGCGATTCGT
GCCGCATGGAAAGTGAACAATACGATCTTTGTGATCATGGCCATTCAGCG
CGATTCACACCATAAATTTCCAGTGTTCTCCGCATTTCGTCCCATCATTC
TGTGAATATTCACATCATCCATTTAGGTGTACCTTGTCAGCCGTTGTATC
TCATTCCCTGGGTGCCCCAGCCACTTTCAGATGCATGTGGAGTAACAATT
AATTATGCTCCAATTTAACTAACTGCACTTTGATAAATTGGCCGGCTGGA
CCCGAAGGATCCGACTCTGCACTCCGCCGAGCATCATCGCCGACTCTTCC
CAACCCTCTGGCCTAGCCGACCAGAGGTCATTTTCAGTTTCTGATGATAG
TTACTGATGAGTAGATGGATAGATAGCGAGTGACTCTCCGGGTCATGTCA
TTGAAGAACAATGGGAACAGATAAGGGAAAACGCAGCTGGGGCCAGGGAA
AACCAACTCCTCTCCCAGGGTGGGGAATCGCCTCGATCCTCGCCACTGTC
TGCAGGGCTCACCTTCCATCTTGTCCGACCTGGGATCGAGTCAGGCGACG
AGGAGTGAATTCGCCTCACTTGTGCGGCTTCCACAAATTTCAAATTGAGG
GGAGAGAGAGCACTAGGTAACTTGATGAGTCGACCCCGGTGATCGGATAA
AATCATGGCTGGCAATATGGTAATTTGATTAGACTCGGAGTGTTTTGAAA
TAAACAGACCAGGTCACTTTGAGTCGGAGGCTTCCATGCTTCTCTGGCGC
CTTGCCAGATTCTCACGAGTGGCCATGATGGCGATGACAGGGAGTGCATG
ACCCTGCTTCATTAGGGGTGGTAATGTAGTAATCCCATTTTAAGTCCTTG
GCAGGGGCGAAAACTTTTCCCATCTTCATCAGCTATCCCCCAGGCATGGC
ATCCACCTTTAAGCACTTGTCGCACGACGAGGCAATGAGAATTGCCGCTC
CAATCTCTCATATCCCTCAATCAGATCATGGAAGAAACTCACCAAATGCC
GACCCAAGGCGCTCGGGCTGACATTCACGCCCAATCATATCCCCGCCACT
TGGCCTCATTCCCAACGTTTCACTCCCTATTTCAGTGGCCCGTCGAAGGC
GAAAAGATGCCCGACAACGTCGTCAGCGAACCACTTTCACCTCTGACCAG
ACCTTGCGATTGGAGTTGGAGTACCAGAGGAACGAGTACATCTCCAGACC
GCGTCGCTTCGAACTGGCGGAAGCTCTGGATCTGACGGAGACGCAGATCA
AGATTTGGTTCCAAAACCGCCGGGCCAAGGACAAGCGGATCGAGAAGGCT
CAGATCGATCACCAATACCGGTAAGATTGAGTACTGTGTGTATACATTTA
GCCCCGACTTACTTACACCTCGATCCCTTGCAGATGTCTGGCCTTCGGCA
TCCCGCCCACACCTTACTCCCCTTCATTTTGCACAGAGTGCTACTATAAA
CCCGGCTCGTGCGGCTCTCTCCATCAAGGCAGTCTGATACCCAGTCCATT
GGCCAGCTCCAATTTGGGCCCACCCGAGTCGCCGTTGCCCGGATCGCCCA
CCAATAATTACATGCCCACCCCCAATAAGATGGTTACCTGA

Synonyms

The feature 'vax1 transcription' has the following synonyms


Synonym
Tk09103

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