glycine receptor subunit alpha-2-like, snap_masked-scaffold127_size327531-processed-gene-1.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000011250 (supercontig:LSalAtl2s:LSalAtl2s76:68800:74845:-1 gene:EMLSAG00000011250 transcript:EMLSAT00000011250 description:"maker-LSalAtl2s76-augustus-gene-0.8") HSP 1 Score: 243.432 bits (620), Expect = 1.678e-73 Identity = 119/270 (44.07%), Postives = 178/270 (65.93%), Query Frame = 0 Query: 401 MGVKTEGEASYNVHELPAIDG-QPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEY-----AVFFEENYE-EEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAV 663 + K Y++HE P + +P+LV S++LRN+L +DE +Q+ITLET+LRLYW DPR+ V +++ +YV +P +++ W PDI+ID +KA+R+PT ++PASLRVY +ST RY++++N+DVAC M+F ++P D Q C++K+ES+G T E++ WK+G S + +N ISLAQF+ ++F Y ++ G+IM + LRR+I YH++QTY+PS +FV VAWLSLF+ PESIP AMFGAV Sbjct: 30 LAAKIVFSKDYSIHEAPRVYADKPLLVNFSINLRNVLSVDEKQQIITLETSLRLYWEDPRIAVLPSALSESRNYVTFNPKVAEYFWIPDIFIDKSKAVRVPTYFVKPASLRVYNDSTVRYSSRLNFDVACEMDFHRFPVDEQLCEIKFESFGFTTEQLMFSWKKG--SSNINQN--ISLAQFDMNKSLNCLYFTHIYNTSHPFMSIFVGLIMKIHLRREIGYHIVQTYIPSMIFVFVAWLSLFISPESIP--------------AMFGAV 281
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000009137 (supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 gene:EMLSAG00000009137 transcript:EMLSAT00000009137 description:"maker-LSalAtl2s575-augustus-gene-0.8") HSP 1 Score: 206.068 bits (523), Expect = 7.816e-57 Identity = 104/254 (40.94%), Postives = 160/254 (62.99%), Query Frame = 0 Query: 411 YNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKF-IWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAV 663 Y+V E P G P+ V +S++LRNI E++E LIT+ET++R+ W+DPR+ + + D++ + K W PD++ID AK RIP ++P SLR Y+N R + +IN+DV C M+F KYP D Q C + ES+ +++ M++ W D S N I+L QF ++F++ Y+ + Y G+I+ + L+R I YH++QT++PS +FVI+ W+SLFL P++IPGRV M M +LLT AMF +V Sbjct: 34 YSVMEGPHNKGSPLHVNISINLRNIFEVNEKLSLITVETSIRMIWQDPRIYPTNNGSDWDFDFITFNGKIVKRKFWIPDVFIDGAKNARIPKYHLQPMSLRYYKNRNLRLSLRINFDVICQMDFHKYPNDEQLCDIPLESWDTSMDDMKLNW----DLSNSVINPNITLDQFSPLIYFKK-YDTQSDMTSYSGLIIRIQLQRLIPYHVIQTFIPSIVFVILGWISLFLDPQAIPGRVKMVMLSLLTSLAMFNSV 282
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000012971 (supercontig:LSalAtl2s:LSalAtl2s98:1296021:1320554:-1 gene:EMLSAG00000012971 transcript:EMLSAT00000012971 description:"maker-LSalAtl2s98-augustus-gene-14.11") HSP 1 Score: 172.94 bits (437), Expect = 3.483e-47 Identity = 84/142 (59.15%), Postives = 102/142 (71.83%), Query Frame = 0 Query: 388 GLALDPIQKDLLVMGVKTEG------EASYNVHELPAID-GQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQ 522 +A DPI +D + ++ YN+HE+P + G P+ VEVSVSLRNILEIDEHKQL+T+ETTLRLYW D RL V H+L N + DY+LLHP +K IWFPDIYIDFAK +RIPT + PASLR+YRNST RYAT Sbjct: 14 SMAWDPILRDFGQLKIQNMDLKDKPFNGGYNIHEIPPTENGDPLTVEVSVSLRNILEIDEHKQLLTIETTLRLYWVDERLSVKHLLENSSMDYILLHPKVAKLIWFPDIYIDFAKDLRIPTYMTPPASLRIYRNSTIRYATH 155 HSP 2 Score: 136.732 bits (343), Expect = 8.339e-35 Identity = 101/272 (37.13%), Postives = 127/272 (46.69%), Query Frame = 0 Query: 598 GVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAVS--------------LLNKCQIGGLAEAEEDQALHSRRTSQYSGQTRHPPAPMGAVVSPSSPREMAPNQHHHSCGSIQENNGIRIVAMDGSAANAASPRHFAHVGTDPPVSKLMKYQENRKKRSMFLCCSKKARKSSLRLQKYEIEIARQPRHRRAIPETSSLGRSCCGGSHRSMVQRVEKMCSLFMALSFLLFNGLYWPWLLGDP 855 GVYPGVIM ++L+R I+YHLLQTYLPSG+FV VAWLSLFLPP+SIPGR+TMAMTTLLTLAAMFGAV + C I E + S T + + SS P H C + GI V + SP H +P V KKR C KK R SSL+ R + ++S + + + + E+ CS MA+ F+ FNG YW WLL +P Sbjct: 162 GVYPGVIMKIILKRNINYHLLQTYLPSGIFVFVAWLSLFLPPQSIPGRITMAMTTLLTLAAMFGAVRQSTPRVSYVSALDIWMCTCIIFVFFALLEYVIMLSLMTKCGKLKKKRSSKEKEEEEDQSSTFLRRP----HPCEAPSATQGINKVFY-----SVESPCHLVMNKQEPKVVT--------KKRGFSGLCHKKRRVSSLK-----------GRMSDSPNSSNSNNINSNVDMNITPFIKFERSCSFIMAVLFISFNGFYWSWLLKEP 405
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000007306 (supercontig:LSalAtl2s:LSalAtl2s410:406162:408817:-1 gene:EMLSAG00000007306 transcript:EMLSAT00000007306 description:"maker-LSalAtl2s410-snap-gene-4.17") HSP 1 Score: 134.42 bits (337), Expect = 5.473e-36 Identity = 73/201 (36.32%), Postives = 115/201 (57.21%), Query Frame = 0 Query: 403 VKTEGEASYNVHELPAIDG-QPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPG 602 VK+E + + P ++ +P+ V S+ NIL+I E ++ITLE ++L WRDPR+ V + YVL + +++ W PDI+ID AK+IR P L ++PA LRVY NS ++ IN+DV C M+F ++P D Q C V +ES+G T ++++ W D + N L Q+ +V F ++ + A +YPG Sbjct: 9 VKSERKKTSVFTMSPKLESDKPLQVNFSIEQLNILDIVEKSEIITLEMNMKLKWRDPRISVRPTALSNIDKYVLFNSRVAEYFWIPDIFIDKAKSIRNPLLHVKPAYLRVYNNSIL-FSNLINFDVFCEMDFHRFPMDEQVCTVNFESFGLTTDEVQFAW----DIXANSINTTFPLTQYICSVQFVNFHKAKYADILYPG 204
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000000919 (supercontig:LSalAtl2s:LSalAtl2s115:697711:740183:1 gene:EMLSAG00000000919 transcript:EMLSAT00000000919 description:"maker-LSalAtl2s115-augustus-gene-7.11") HSP 1 Score: 132.88 bits (333), Expect = 8.632e-33 Identity = 72/248 (29.03%), Postives = 132/248 (53.23%), Query Frame = 0 Query: 411 YNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAA 658 Y+ P G V V++ ++ IDE T + W+D RL++ N TS+Y LL + + IW PD + AK++ T+ I + ++++ T Y ++ ++CPM+F+ YP+DTQTC ++ ES HT + + W + + + + I L Q E ++ ++G + + + +R++ Y+L TY+P+ L VI++W+S ++ PE++P RVT+ +T+LLTL+ Sbjct: 8 YDKMRPPKYKGNATEVLFHVTVMSLDTIDESSMTYTCDVFFAQSWKDNRLRLP---DNMTSEYRLLPIEWLEKIWRPDSFFKNAKSVTFQTMTIPNHYIWLWKDKTILYMVKLTLVLSCPMHFKNYPHDTQTCNLEIESISHTTDDLIFTWDK---EMPLDVDKGIELPQLELISTKSDDCTTVYSTGQFTCLEVVFKFKRRLGYYLFHTYVPTCLIVIMSWISFWIKPEAVPARVTLGVTSLLTLST 249
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000011971 (supercontig:LSalAtl2s:LSalAtl2s84:948400:1079594:1 gene:EMLSAG00000011971 transcript:EMLSAT00000011971 description:"maker-LSalAtl2s84-augustus-gene-10.5") HSP 1 Score: 121.709 bits (304), Expect = 1.132e-29 Identity = 107/440 (24.32%), Postives = 191/440 (43.41%), Query Frame = 0 Query: 420 DGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQV-DHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAVSLLNKCQIGGLAEAEE-DQALHSRRTSQYSGQTRHPPAPMGAVVSPSSPREMAPNQHHHSCGSIQENNGIRIVAMDGSAANAASPRHFAHVGTDPPVSKLMKYQENR-----KKRSMFLCCSKKARKSSLRLQKYEIEIARQPRHRRAIPETSSLGRSCCGGSHRSMVQRVEKMCSLFMALSFLLFNGLYWPWLL 852 DG P + V++ LR I ID+ K +++ T R W D RL+ D G+ Y+ L T +W PD + K R +I+ +R++ N Y+ +I+ +ACPM+ + YP D Q C ++ SYG + + +WK D +V + L +F + + +G Y + + ++ +R+ SY+L+ Y+P + VIV+W+S +L +IP RV++ +TTLLT++ ++ Q+ ++ + D +R S+Y R P G +V S+ + H S+ ++ I + ++ N+A+P PV L Y +R +K + CC + +A+ P S +R++ + L F +FN YW + L Sbjct: 37 DG-PATINVNIYLRTISRIDDVKMEYSVQVTFREQWNDERLRYYDDTHGH--LKYLTLTDPTK--VWMPDTFFRNEKEARKHEIIVPNVYVRIFPNGEILYSIRISLTLACPMDLRLYPLDKQVCVLQIASYGWAKDDLIYLWKEK-DPVQVVPG--LHLPRFTLEQYKSAYCDVTTNTGEYSCLKVELIFKREFSYYLITIYVPCCMLVIVSWVSFWLDQNAIPARVSLGVTTLLTMSTQTSGIN----AQLPPVSYTKAIDVWTGKKRNSEYRNNIR--VDPXGDLVYKST------TSYPHQYNSMYPHHNI-LSGGPPNSYNSATP-----CEIHXPVEHLQAYANSRNGEIDEKNCNWYCCKTRGL------------LAKFP----------------------SRAKRIDVISRFIFPLIFAIFNLAYWLYYL 416
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000000070 (supercontig:LSalAtl2s:LSalAtl2s100:516339:598693:-1 gene:EMLSAG00000000070 transcript:EMLSAT00000000070 description:"maker-LSalAtl2s100-snap-gene-5.24") HSP 1 Score: 117.472 bits (293), Expect = 1.823e-29 Identity = 66/218 (30.28%), Postives = 116/218 (53.21%), Query Frame = 0 Query: 455 WRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAVSLLNKCQIG 672 W+D RL + N T +Y LL + IW PD + AK + T+ I L +Y++ T Y ++ ++CPMNF+ YP+D Q CK+ E HT + + +W D++ + +N I L Q E + ++G + + + RR++ Y+L TY+P+ L V+++W+S ++ PE+ RVT+ +T+LLTL+ ++L + + G Sbjct: 26 WKDHRLILP---DNMTREYRLLPVEWLHLIWRPDSFFKNAKKVTFQTMTIPNHYLWLYKDKTILYMVKLTLLLSCPMNFENYPHDEQNCKLSMEM-SHTTDDLIFIWLPE-DKTPLAVDNGIQLPQLELVSNDTGDCTSVYSTGNFTCLEVIFKFRRRLGYYLFHTYIPTCLIVMMSWISFWIKPEAXXARVTLGVTSLLTLSTQHANINLFDIGKTG 238
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 115.931 bits (289), Expect = 2.229e-27 Identity = 69/253 (27.27%), Postives = 121/253 (47.83%), Query Frame = 0 Query: 411 YNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAV 663 Y++ P G P+ V +++ + I E T+ L YW+D RL + + L D S+ IW PD + K + + + +R++ + Y + +AC M+ YP D+Q C V+ ESYG+T+ + + W+ Q V L QF + + ++A+G Y + ++ L+R I Y + QTYLPS L V+++W+S ++ E+ RV + +TT+LT+ + V Sbjct: 91 YDIRLRPNFGGDPLYVGFDLTIASFDSISEVSMDYTITMYLNQYWKDERLS----FSTEEDKVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWR----QKPVVGVEDAQLPQFTIVGWETNERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISTGV 335
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000001321 (supercontig:LSalAtl2s:LSalAtl2s1223:193582:196888:1 gene:EMLSAG00000001321 transcript:EMLSAT00000001321 description:"snap_masked-LSalAtl2s1223-processed-gene-2.46") HSP 1 Score: 111.694 bits (278), Expect = 8.068e-27 Identity = 65/220 (29.55%), Postives = 113/220 (51.36%), Query Frame = 0 Query: 447 LETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSK--VTENNYISLAQFEYAVFFEENYEEEIASGV-YPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAV 663 LE + W D RL + + L P + W PD Y KA ++ ASLRV + +Y I + CPM+F YP D Q C+++ +S+G+ + + W R K + +N+ + +A + + E G+ + G+ + + L+R + +H+ Q+Y+PS +FV +AW+S +P + +PGR+ +++TTLLTL +MF +V Sbjct: 2 LELKISHMWADLRLNTSEM-----KRPLELEPTSISDFWTPDSYFHHVKASNEVKIMTPVASLRVRPDKIIQYTKIILVTLGCPMSFYNYPMDNQICRLELQSFGYDMNLINYTWMRPPQMKKDIIIDNHDVEIADYTF---------EYSPEGIRFSGLGIRIELKRHLGFHITQSYIPSIIFVAIAWMSFHVPSDVVPGRMVLSVTTLLTLISMFNSV 207
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Match: EMLSAG00000003185 (supercontig:LSalAtl2s:LSalAtl2s176:68925:134641:-1 gene:EMLSAG00000003185 transcript:EMLSAT00000003185 description:"maker-LSalAtl2s176-augustus-gene-1.7") HSP 1 Score: 113.62 bits (283), Expect = 1.431e-26 Identity = 77/288 (26.74%), Postives = 136/288 (47.22%), Query Frame = 0 Query: 409 ASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSD-----YVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIAS-------------GVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAVSLLNKCQIGGLAEAE 678 +Y+ ELP I LVE+ + + +L I++ + +T + + W++PRLQ + ++ + ++ + +W P+I+I K ++ ++ + A L + Y+ + CPM F +P DTQ CK + SY + KMR +VT A+ A+ + Y+ +I S G Y ++L R +S++++ YLPSGLFV+V+W+S +PP IPGR+ + +T L L +F +V+ N + GL E Sbjct: 42 TNYSKFELP-IPNSVNLVEIGIDIGEVLRINDKEYSVTFSSYFNVLWKEPRLQYSDKFTKEVNNSSPETLIPVNLELVNELWLPNIFIYNLKTFKVVEVLSKHAGLWITSEKDILYSQATHITFICPMRFDAFPLDTQRCKFQVGSYSYDDTKMRFA-----GSPRVT-----GYAEXSRAIVLD--YDIQIKSLKMKDMIYHSGTLGNYSLAGFEMVLHRYVSHYIITYYLPSGLFVVVSWISFVVPPTVIPGRMALLITLFLVLVNIFNSVT-TNTPKAEGLTAIE 315
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|75057875|sp|Q5EA06.1|GBRP_BOVIN (RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName: Full=GABA(A) receptor subunit pi; Flags: Precursor) HSP 1 Score: 142.124 bits (357), Expect = 6.771e-35 Identity = 79/251 (31.47%), Postives = 132/251 (52.59%), Query Frame = 0 Query: 409 ASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAM 659 A YN P G+PV + +++ + +I I E T LR W D RL + GNK+ L +F+W PD YI +K + + + +R++ N T YA +I VAC M+ KYP DTQTCK++ ES+G+ + W RG D + EN + LAQ+ +F + +G Y +++ L+R + Y +L+TY+PS V+++W+S ++ +S+P R + +TT+L++ + Sbjct: 46 AGYNKFLRPNFGGEPVQIALTLDVASISSISESNMDYTATIYLRQRWTDQRLVFE---GNKS---FTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLEN--LRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTL 288
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|62901525|sp|Q94900.2|GLUCL_DROME (RecName: Full=Glutamate-gated chloride channel; Short=DrosGluCl; Flags: Precursor) HSP 1 Score: 142.124 bits (357), Expect = 7.822e-35 Identity = 79/261 (30.27%), Postives = 141/261 (54.02%), Query Frame = 0 Query: 407 GEASYNVHELPA-IDGQ--PVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAVS 664 G Y+ P+ I+G P +V +++ +R+I+ I + K +++ T R W D RL+ D I G Y+ L + +W PD++ K +I+ +R++ N + Y+ +I+ +ACPMN + YP D Q C ++ SYG T + +WK G D +V +N + L +F F + + +G Y + + +L +R+ SY+L+Q Y+P + VIV+W+S +L ++P RV++ +TTLLT+A ++ Sbjct: 42 GAGKYDARIRPSGINGTDGPAIVRINLFVRSIMTISDIKMEYSVQLTFREQWTDERLKFDDIQGRL--KYLTL--TEANRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLACPMNLKLYPLDRQICSLRMASYGWTTNDLVFLWKEG-DPVQVVKN--LHLPRFTLEKFLTDYCNSKTNTGEYSCLKVDLLFKREFSYYLIQIYIPCCMLVIVSWVSFWLDQGAVPARVSLGVTTLLTMATQTSGIN 295
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|3023821|sp|O09028.1|GBRP_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName: Full=GABA(A) receptor subunit pi; Flags: Precursor) HSP 1 Score: 135.191 bits (339), Expect = 1.208e-32 Identity = 81/251 (32.27%), Postives = 131/251 (52.19%), Query Frame = 0 Query: 409 ASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAM 659 A YN P G PV + +++ + +I I E T LR W DPRL + GNK+ L +F+W PD YI +K + + + +R++ N T YA +I V C M+ KYP DTQTCK++ ES+G+ + W RG D + EN + LAQ+ +F + +G Y +++ LRR + Y +L+TY+PS V+++W+S ++ ES+P R + +TT+L++ + Sbjct: 46 AGYNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFE---GNKS---FTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLEN--LRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLESVPARTCIGVTTVLSMTTL 288
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|62901524|sp|Q8QZW7.1|GBRP_MOUSE (RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName: Full=GABA(A) receptor subunit pi; Flags: Precursor) HSP 1 Score: 133.65 bits (335), Expect = 4.167e-32 Identity = 80/251 (31.87%), Postives = 131/251 (52.19%), Query Frame = 0 Query: 409 ASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAM 659 A YN P G PV + +++ + +I I E T LR W DPRL + GNK+ L +F+W PD YI +K + + + +R++ N T YA +I V C M+ KYP DTQTCK++ ES+G+ + W RG D + EN + LAQ+ +F + +G Y +++ LRR + Y +L+TY+PS V+++W+S ++ +S+P R + +TT+L++ + Sbjct: 46 AGYNKFLRPNFGGDPVRIALTLDIASISSISESNMDYTATIYLRQRWTDPRLVFE---GNKS---FTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVTCNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLEN--LRLAQYTIQQYFTLVTVSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTL 288
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|6016089|sp|O00591.1|GBRP_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit pi; AltName: Full=GABA(A) receptor subunit pi; Flags: Precursor) HSP 1 Score: 132.88 bits (333), Expect = 8.773e-32 Identity = 79/251 (31.47%), Postives = 132/251 (52.59%), Query Frame = 0 Query: 409 ASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAM 659 A YN P G+PV + +++ + +I I E T LR W D RL + GNK+ L +F+W PD YI +K + + + +R++ N T YA +I VAC M+ KYP DTQTCK++ ES+G+ + W RG D + E ++ LAQ+ +F + +G Y +++ LRR + Y +L+TY+PS V+++W+S ++ +S+P R + +TT+L++ + Sbjct: 46 AGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWMDQRLVFE---GNKS---FTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFTWLRGNDSVRGLE--HLRLAQYTIERYFTLVTRSQQETGNYTRLVLQFELRRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTL 288
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|1730196|sp|P50573.1|GBRR3_RAT (RecName: Full=Gamma-aminobutyric acid receptor subunit rho-3; AltName: Full=GABA(A) receptor subunit rho-3; AltName: Full=GABA(C) receptor; Flags: Precursor) HSP 1 Score: 128.257 bits (321), Expect = 3.632e-30 Identity = 81/254 (31.89%), Postives = 130/254 (51.18%), Query Frame = 0 Query: 417 PAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNK-TSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEE-----IASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAVS 664 P G PV V + V + +I I E T+ LR YW+D RL T D L+ IW PDI+ +K I + LRV+ + ++ +I C M+F ++P DTQ C ++ ESY + E + + WK G ++S TE +ISL+QF F EE ++G Y + + +LRR I + +LQTY P+ L V+++W+S ++ ++P RV++ +TT+LT++ + VS Sbjct: 73 PGFGGSPVPVGIDVQVESIDSISEVNMDFTMTFYLRHYWKDERLSFPSTTNKSMTFDRRLIQK-----IWVPDIFFVHSKRSFIHDTTVENIMLRVHPDGNVLFSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEEDLMLYWKHG-NKSLNTE-EHISLSQF----FIEEFSASSGLAFYSSTGWYYRLFINFVLRRHIFFFVLQTYFPAMLMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIVTGVS 315
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|120781|sp|P26714.1|GBRB_LYMST (RecName: Full=Gamma-aminobutyric acid receptor subunit beta; AltName: Full=GABA(A) receptor; Flags: Precursor) HSP 1 Score: 127.872 bits (320), Expect = 9.127e-30 Identity = 79/258 (30.62%), Postives = 131/258 (50.78%), Query Frame = 0 Query: 411 YNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQV----DHILG-NKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAV 663 Y++ P+ G P+ + + V L + I E T+ L YWRD RLQ LG N++ + L ++ IW PD ++ K + + + +R+Y N + Y + +AC M+ YP D Q C V+ ESYG+T++ + + W D+ VT +SL QF + N EE+++G Y + + L+R I Y + QTYLPS L V+++W+S ++ E+ RV + +TT+LT+ + V Sbjct: 44 YDIRLRPSFGGAPLEIGIEVILASFDSISEVDMDYTITMYLNQYWRDERLQFIFNESLDLGENRSVTTMTLTGAFAEKIWVPDTFLANDKNSFLHDITEKNKMVRLYGNGSLVYGMRFTTTLACMMDLHNYPLDHQECTVEIESYGYTMDDIVLYWLN--DRGAVTGVEDVSLPQFSITNYATINKIEELSTGDYQRLSLIFQLQRNIGYFIFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTTISNGV 299
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|704000349|sp|G5EBR3.1|GLUCL_CAEEL (RecName: Full=Glutamate-gated chloride channel alpha; AltName: Full=Avermectin-sensitive glutamate-gated chloride channel GluCl alpha; AltName: Full=GluCl alpha; Flags: Precursor) HSP 1 Score: 127.102 bits (318), Expect = 9.890e-30 Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 0 Query: 417 PAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFD-QSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAVS 664 P +G PV+V V++ LR I +ID + + TLR W D RL + G+ D+V+L IW PD + K T+ +R++ + T Y+ +I+ ++CPM Q YP D Q C + SY +T + + +WK Q KV ++ SL F+ +G+Y + T+ L+R+ S++LLQ Y+PS + VIV+W+S + +IP RVT+ +TTLLT+ A ++ Sbjct: 82 PTDNGGPVVVSVNMLLRTISKIDVVNMEYSAQLTLRESWIDKRLSYG-VKGDGQPDFVIL--TVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHSPLQLKVGLSS--SLPSFQLTNTSTTYCTSVTNTGIYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQSAGIN 325
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|120772|sp|P19019.1|GBRB3_CHICK (RecName: Full=Gamma-aminobutyric acid receptor subunit beta-3; AltName: Full=GABA(A) receptor subunit beta-3; Flags: Precursor) HSP 1 Score: 127.102 bits (318), Expect = 1.130e-29 Identity = 74/249 (29.72%), Postives = 125/249 (50.20%), Query Frame = 0 Query: 411 YNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAM 659 Y++ P G PV V +++ + +I + E TL + YWRD RL I N T D + +W PD Y K + + ++ +R++ + T Y +I AC M+ ++YP D Q C ++ ESYG+T + + W+ G + VT I L QF + + A+G YP + ++ L+R I Y +LQTY+PS L I++W+S ++ ++ RV + +TT+LT+ + Sbjct: 48 YDIRLRPDFGGPPVCVGMNIDIASIDMVSEVNMDYTLTMYFQQYWRDKRLAYAGIPLNLTLD-----NRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWRGG--DNAVTGVERIELPQFSIVEYRLVSKNVVFATGAYPRLSLSFRLKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTI 289
BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Match: gi|187471177|sp|A8MPY1.2|GBRR3_HUMAN (RecName: Full=Gamma-aminobutyric acid receptor subunit rho-3; AltName: Full=GABA(A) receptor subunit rho-3; AltName: Full=GABA(C) receptor; Flags: Precursor) HSP 1 Score: 127.102 bits (318), Expect = 1.133e-29 Identity = 80/254 (31.50%), Postives = 134/254 (52.76%), Query Frame = 0 Query: 417 PAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEI------ASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAVS 664 P G PV V + V + +I I E T+ LR YW+D RL NK+ + H T K IW PDI+ +K I + LRV+ + + +I C M+F ++P DTQ C ++ ESY + + + + WK G ++S TE ++SL+QF F E++ ++G Y + + +LRR + + +LQTY P+ L V+++W+S ++ ++P RV++ +TT+LT++ + AVS Sbjct: 76 PGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDERLSFPST-ANKSMTFD--HRLTRK-IWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNVLLSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHG-NKSLNTEE-HMSLSQF-----FIEDFSASSGLAFYSSTGWYNRLFINFVLRRHVFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITAVS 318
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1325300922|ref|XP_023332038.1| (gamma-aminobutyric acid receptor subunit pi-like [Eurytemora affinis]) HSP 1 Score: 330.487 bits (846), Expect = 3.304e-104 Identity = 151/192 (78.65%), Postives = 170/192 (88.54%), Query Frame = 0 Query: 472 DYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAV 663 DY+L+HPDT K+IW PDIYIDFAKA+R P ++ PASLR+YRNST RYA+QINYDVACPM+FQ+YP+DTQ CKVK+ESYGHT +KM V WKRG D SK+TENN ISLAQF+YAV FEE Y E IASG YPGVIMT+ LRRK+SYHLLQT+LPS LFVIVAWLSLFLPPESIPGR+ MAMTTLLTLAAMFGAV Sbjct: 19 DYILMHPDTVKYIWCPDIYIDFAKALRAPMFLVAPASLRIYRNSTLRYASQINYDVACPMSFQRYPHDTQICKVKFESYGHTSDKMDVRWKRGLDASKITENNSISLAQFDYAVSFEEEYREAIASGEYPGVIMTIALRRKLSYHLLQTFLPSALFVIVAWLSLFLPPESIPGRIAMAMTTLLTLAAMFGAV 210
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1325268046|ref|XP_023344159.1| (glycine receptor subunit alpha-4-like isoform X3 [Eurytemora affinis]) HSP 1 Score: 244.973 bits (624), Expect = 1.282e-69 Identity = 118/271 (43.54%), Postives = 182/271 (67.16%), Query Frame = 0 Query: 395 QKDLLVMGVKTEGEASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRL--QVDHILG-NKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGA 662 Q D + G+ +YN+HE P G P+ + S++LRNIL++DE Q+++LETTLRLYW+DPR+ + +++ + +Y L+P + IW PDI+ID AK +R P+ I+PASLRVY +S RY+++IN+DVAC M+F +YP D Q C++K+ES+G ++++ W + + N I+LAQF + V ++Y + YPG+I+ + L R I YH++QTY+PS +FV++AW+ +F+P ES+PGRV M MTT+LTL AMF + Sbjct: 25 QTDFSLEGIFLNVSPNYNLHERPYSKG-PLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWI----PNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSS 290
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1325268042|ref|XP_023344143.1| (glycine receptor subunit alpha-4-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 242.276 bits (617), Expect = 1.612e-68 Identity = 124/292 (42.47%), Postives = 193/292 (66.10%), Query Frame = 0 Query: 376 QNPFANKGY--LGYGLALDPIQKDLLVMGVKTEGEASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRL--QVDHILG-NKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGA 662 Q F+ +G L +G+ LD D++ + V +YN+HE P G P+ + S++LRNIL++DE Q+++LETTLRLYW+DPR+ + +++ + +Y L+P + IW PDI+ID AK +R P+ I+PASLRVY +S RY+++IN+DVAC M+F +YP D Q C++K+ES+G ++++ W + + N I+LAQF + V ++Y + YPG+I+ + L R I YH++QTY+PS +FV++AW+ +F+P ES+PGRV M MTT+LTL AMF + Sbjct: 25 QTDFSLEGIFNLSFGI-LDIKSPDVVQLNVS----PNYNLHERPYSKG-PLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWI----PNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSS 306
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1325268044|ref|XP_023344150.1| (glycine receptor subunit alpha-4-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 241.891 bits (616), Expect = 1.993e-68 Identity = 121/281 (43.06%), Postives = 188/281 (66.90%), Query Frame = 0 Query: 385 LGYGLALDPIQKDLLVMGVKTEGEASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRL--QVDHILG-NKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGA 662 L +G+ LD D++ + V +YN+HE P G P+ + S++LRNIL++DE Q+++LETTLRLYW+DPR+ + +++ + +Y L+P + IW PDI+ID AK +R P+ I+PASLRVY +S RY+++IN+DVAC M+F +YP D Q C++K+ES+G ++++ W + + N I+LAQF + V ++Y + YPG+I+ + L R I YH++QTY+PS +FV++AW+ +F+P ES+PGRV M MTT+LTL AMF + Sbjct: 27 LSFGI-LDIKSPDVVQLNV----SPNYNLHERPYSKG-PLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWI----PNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSS 297
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1325268048|ref|XP_023344165.1| (glycine receptor subunit alpha-4-like isoform X4 [Eurytemora affinis]) HSP 1 Score: 241.121 bits (614), Expect = 2.723e-68 Identity = 115/256 (44.92%), Postives = 177/256 (69.14%), Query Frame = 0 Query: 410 SYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRL--QVDHILG-NKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGA 662 +YN+HE P G P+ + S++LRNIL++DE Q+++LETTLRLYW+DPR+ + +++ + +Y L+P + IW PDI+ID AK +R P+ I+PASLRVY +S RY+++IN+DVAC M+F +YP D Q C++K+ES+G ++++ W + + N I+LAQF + V ++Y + YPG+I+ + L R I YH++QTY+PS +FV++AW+ +F+P ES+PGRV M MTT+LTL AMF + Sbjct: 31 NYNLHERPYSKG-PLKITASINLRNILDVDEKAQIVSLETTLRLYWKDPRISPKAEYLESFDSMGNYTTLNPSLASKIWMPDIFIDQAKVLRAPSYFIQPASLRVYNDSLIRYSSRINFDVACNMDFHRYPVDEQYCEIKFESFGLQSNQIQLGWI----PNSMDVNQNITLAQFHFRVKLMDSYSTDYYDVSYPGLILQLHLTRVIGYHIVQTYIPSTVFVVLAWMGMFIPVESVPGRVGMGMTTMLTLTAMFSS 281
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1325257282|ref|XP_023323536.1| (glycine receptor subunit alpha-4-like [Eurytemora affinis]) HSP 1 Score: 238.039 bits (606), Expect = 2.684e-67 Identity = 113/259 (43.63%), Postives = 174/259 (67.18%), Query Frame = 0 Query: 408 EASYNVHELPAIDGQ-PVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDH-ILGNKTS--DYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGA 662 E YN+HE+P + Q P+L+ S+++RNILE+DE Q++++ETTLRLYW+DPR++ + L + S +Y LH + IW PDI++D AK IR PT +PASLRVY +ST RY+ +IN+DVAC M+F+ YP D Q+C++K++S+G ++ W + + N +I L+QF + + ++Y + YPG+ + + L R+I YH++QTY+PS LF+++ W+ LF+ P+SIPGRV M TTLLT +MF + Sbjct: 6 EDDYNLHEIPRTENQQPLLISASINIRNILEVDEKDQIVSMETTLRLYWKDPRIKPKYEALSSYDSRGNYTNLHSSLANTIWMPDIFLDHAKTIRTPTFFSKPASLRVYNDSTIRYSARINFDVACNMDFRNYPADDQSCELKFQSFGLQRSQVHFTWI----PNSINVNEHIYLSQFVFRIHAMDSYSTDYYDISYPGLKLQLHLTREIGYHIVQTYIPSTLFLVLGWMGLFINPDSIPGRVGMGTTTLLTQTSMFSS 260
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1325292244|ref|XP_023330045.1| (glycine receptor subunit alpha-4-like [Eurytemora affinis]) HSP 1 Score: 231.491 bits (589), Expect = 1.418e-64 Identity = 115/255 (45.10%), Postives = 175/255 (68.63%), Query Frame = 0 Query: 412 NVHELPAI-DGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRL--QVDHILGNKTS-DYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGA 662 ++HE+P D +P+ V S+++RNIL+++E K L++LETTLRL WRDPR+ + ++ T+ +Y L+P + IW PDI++D AK +R PT ++PASLRVY +S RY+ +IN+DVAC M+F+ YP D QTC+VK+ES+G ++ ++V+ D V N I+L+QF + V ++Y + YPG+ + + L R+I YHL+QTY+PS +F+++AW+ LF+P E IPGRV M MTT+LT +MF A Sbjct: 34 DIHEIPPTRDKKPLAVSASINIRNILDVEEVKMLVSLETTLRLLWRDPRIVPKAQYLTSRDTNGNYTNLNPSLASSIWIPDIFVDLAKDMRTPTFFMKPASLRVYSDSLIRYSARINFDVACNMDFRYYPVDDQTCEVKFESFG--LQSNQIVFNWIPDSMNVNYN--ITLSQFLFKVRAIDSYATDYYDLKYPGLKLQIHLTRQIGYHLVQTYIPSTVFLVLAWMGLFIPKEIIPGRVGMGMTTILTQTSMFSA 284
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1325307059|ref|XP_023335146.1| (gamma-aminobutyric acid receptor subunit beta-3-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 213.772 bits (543), Expect = 3.240e-59 Identity = 106/232 (45.69%), Postives = 155/232 (66.81%), Query Frame = 0 Query: 408 EASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPP 639 E Y+ H +P G P+ V S++LRN+L +DE + ++LETTLR+YW+D RL++ ++Y+ L + IW PDI+ID A ++R P L + P SLR+Y+NST RY+T++NYDVAC M+F YP+D QTC +KYES+G T ++M + W + + V +N ISLAQF+ V Y YPG+I+ + LRRK+SYH++QT+LPS +F+ +AWL+LFLPP Sbjct: 66 EDGYDHHSVPPSQG-PIRVLFSINLRNVLGVDEIGERVSLETTLRMYWKDRRLKIRDEFLPSINNYLHLDNRFANHIWIPDIFIDQAISLRQPKLHLTPISLRIYKNSTLRYSTRVNYDVACNMDFHFYPHDVQTCLIKYESFGLTKDEMYLEWGQ---DNNVNKN--ISLAQFDVTVELVSEYSTSYYDLSYPGLILKLTLRRKLSYHMVQTFLPSAVFLCIAWLALFLPP 291
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1325307061|ref|XP_023335147.1| (glutamate-gated chloride channel-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 212.616 bits (540), Expect = 1.036e-58 Identity = 107/232 (46.12%), Postives = 156/232 (67.24%), Query Frame = 0 Query: 408 EASYNVHELPAIDGQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPP 639 E Y+ H +P G P+ V S++LRN+L +DE + ++LETTLR+YW+D RL++ ++Y+ L + IW PDI+ID A ++R P L + P SLR+Y+NST RY+T++NYDVAC M+F YP+D QTC +KYES+G T ++M + W + + V +N ISLAQF+ V E Y YPG+I+ + LRRK+SYH++QT+LPS +F+ +AWL+LFLPP Sbjct: 66 EDGYDHHSVPPSQG-PIRVLFSINLRNVLGVDEIGERVSLETTLRMYWKDRRLKIRDEFLPSINNYLHLDNRFANHIWIPDIFIDQAISLRQPKLHLTPISLRIYKNSTLRYSTRVNYDVACNMDFHFYPHDVQTCLIKYESFGLTKDEMYLEWGQ---DNNVNKN--ISLAQFDVTVELSE-YSTSYYDLSYPGLILKLTLRRKLSYHMVQTFLPSAVFLCIAWLALFLPP 290
BLAST of glycine receptor subunit alpha-2-like vs. nr
Match: gi|1228373653|ref|XP_021948014.1| (glutamate-gated chloride channel subunit beta-like [Folsomia candida]) HSP 1 Score: 217.624 bits (553), Expect = 5.680e-58 Identity = 112/256 (43.75%), Postives = 168/256 (65.62%), Query Frame = 0 Query: 409 ASYNVHELPAID-GQPVLVEVSVSLRNILEIDEHKQLITLETTLRLYWRDPRLQVDHILGNKTSDYVLLHPDTSKFIWFPDIYIDFAKAIRIPTLIIRPASLRVYRNSTCRYATQINYDVACPMNFQKYPYDTQTCKVKYESYGHTIEKMRVVWKRGFDQSKVTENNYISLAQFEYAVFFEENYEEEIASGVYPGVIMTVLLRRKISYHLLQTYLPSGLFVIVAWLSLFLPPESIPGRVTMAMTTLLTLAAMFGAV 663 ++Y++HE P + +P V+ SV + N+ +I E + ++LE LR+YW+D RL H+ +++L+P + IW PDI+ID K+++ P LI +PASLRVY +S+ RY+ +I +AC M+F YP DTQ C V +SY ++ + M + W+ G V +++ L F+ A+ +N+ +SG Y G+ T+LLRRK+SYHL+QTYLPS LF+IV+WLS +PPES+PGR+ + MTTLLTL AMF AV Sbjct: 64 SNYSIHEPPPTNNSEPTGVDFSVLIMNVRDIKELNEELSLEMNLRIYWKDTRLS--HLADRSGDKFIVLNPKLVESIWMPDIFIDHVKSVQQPALITKPASLRVYPDSSVRYSARITVTMACQMDFHFYPADTQRCNVDMKSYAYSSQIMALDWREGKGALLV---DFLELPNFDVALDTTQNFMVNTSSGSYSGIRFTILLRRKLSYHLIQTYLPSTLFIIVSWLSFLVPPESVPGRMALCMTTLLTLTAMFSAV 314 The following BLAST results are available for this feature:
BLAST of glycine receptor subunit alpha-2-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of glycine receptor subunit alpha-2-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of glycine receptor subunit alpha-2-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold127_size327531:121602..153684+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold127_size327531-processed-gene-1.4 ID=snap_masked-scaffold127_size327531-processed-gene-1.4|Name=glycine receptor subunit alpha-2-like|organism=Tigriopus kingsejongensis|type=gene|length=32083bp|location=Sequence derived from alignment at scaffold127_size327531:121602..153684+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'glycine receptor subunit alpha-2-like' has the following synonyms
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