GM16961, snap_masked-scaffold1978_size23474-processed-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of GM16961 vs. L. salmonis genes
Match: EMLSAG00000007390 (supercontig:LSalAtl2s:LSalAtl2s41:643434:645644:-1 gene:EMLSAG00000007390 transcript:EMLSAT00000007390 description:"snap-LSalAtl2s41-processed-gene-6.42") HSP 1 Score: 106.686 bits (265), Expect = 1.581e-24 Identity = 53/133 (39.85%), Postives = 79/133 (59.40%), Query Frame = 0 Query: 313 QPIVQLALHIKEDLKFDVWA--VTGAGFEVIVTITDGPTVNRQFYSELLCQIKLKRSVPSPQNPEEPLFLQFDGAHLFKNFYANFMRCLEFICPDFQGKPMSAQFDHIQSLCHKELGHPVKLAHKLTAKILLP 443 PI +L I + FD A V+ GF+V TI D T+N++ YS LC L+ + +P +P+ ++L FD + KNF+ NF+ F+CP+F+GK M + HI L + ELG P+K+AHKLT ++L P Sbjct: 374 HPISKLNAEIVKKNVFDQVAQVVSQIGFKVRATICDAHTINQKMYSSDLCHRNLRPYIFNPNSPKSKIYLLFDSVDVMKNFFNNFLSRTHFVCPNFRGKLMEGKVSHIVDLYNLELGDPLKIAHKLTERVLEP 506
BLAST of GM16961 vs. L. salmonis genes
Match: EMLSAG00000008076 (supercontig:LSalAtl2s:LSalAtl2s47:287231:290661:-1 gene:EMLSAG00000008076 transcript:EMLSAT00000008076 description:"augustus-LSalAtl2s47-processed-gene-3.11") HSP 1 Score: 69.707 bits (169), Expect = 1.191e-12 Identity = 37/112 (33.04%), Postives = 59/112 (52.68%), Query Frame = 0 Query: 330 VWAVTGAGFEVIVTITDGPTVNRQFYSELLCQIKLKRSVPSPQNPEEPLFLQFDGAHLFKNFYANFMRCLEFICPDFQGKPMSAQFDHIQSLCHKELGHPVKLAHKLTAKIL 441 + +T GF+V+ + DG N +FY++ LC L+ S+ +P +P LFL FD HLFK Y+NF+ + P F+ K + + SL H H ++ +L K+L Sbjct: 422 IKMITKLGFDVVGLVCDGYASNIEFYNKELCHGALQSSIENPYSPGNRLFLLFDTVHLFKKIYSNFLNKKTLVLPSFREKNEDEEKNFTASLDHIFQLHEIEDELQLNKKVL 533
BLAST of GM16961 vs. L. salmonis genes
Match: EMLSAG00000005372 (supercontig:LSalAtl2s:LSalAtl2s28:136065:140303:1 gene:EMLSAG00000005372 transcript:EMLSAT00000005372 description:"maker-LSalAtl2s28-snap-gene-1.60") HSP 1 Score: 62.3882 bits (150), Expect = 2.716e-10 Identity = 40/131 (30.53%), Postives = 64/131 (48.85%), Query Frame = 0 Query: 322 IKEDLKFDVW-----AVTGAGFEVIVTITDGPTVNRQFYSELLCQIKLKRSVPSPQNPEEPLFLQFDGAHLFKNFYANFMRCLEFICPDFQ--GKPMSAQFDHIQSLCHKELGHPVKLAHKLTAKILLPRP 445 IK +DV+ A+T GF V+ I+DG + + F+ + + L V +P +P + + F+ + + KNFY +F+ CP F K +S FD ++ L E VK++H L K L P P Sbjct: 488 IKAQTIYDVYMAALKALTDIGFRVVAVISDGNSSHIHFFKDKIFNGSLLPIVENPFDPAIKIHIIFEQSTILKNFYHSFLSKKILYCPAFDDFNKFLSPNFDDLKILYQLEDNKSVKISHYLEDKCLSPSP 618
BLAST of GM16961 vs. L. salmonis genes
Match: EMLSAG00000009597 (supercontig:LSalAtl2s:LSalAtl2s617:147807:148969:-1 gene:EMLSAG00000009597 transcript:EMLSAT00000009597 description:"maker-LSalAtl2s617-augustus-gene-1.41") HSP 1 Score: 54.299 bits (129), Expect = 4.076e-8 Identity = 40/135 (29.63%), Postives = 67/135 (49.63%), Query Frame = 0 Query: 196 DFKDQRCDTNPWRKTDSSSLIRRNLLATAVPSVFPNLPSYLSREISSPRSDN-SSSQRHQRGFDRWEEQACDLLQQDEVCSLNELASKLDLSSFPS-MQLWSSASHMTIVLLHLVVETQQPIVQLALHIKEDLKF 328 DF+ Q NP + L +VPS FPNLP ++ ++ RS+ +SS RHQR +R QA + Q++ + SL++L KL ++ PS + + + ++ + + Q + +L I EDL F Sbjct: 70 DFEQQYLYQNPKELNSKNIKCSNKLKQGSVPSKFPNLPKE-TKMLTPSRSERATSSARHQRQLERLNTQAKEFYQKNNIQSLDDLEKKLGKATLPSQVSMIKQEGKLYLITIGMSKFGTQEL-SFSLEINEDLSF 202
BLAST of GM16961 vs. SwissProt
Match: gi|75063858|sp|Q767K8.1|RT18B_PIG (RecName: Full=28S ribosomal protein S18b, mitochondrial; Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName: Full=28S ribosomal protein S18-2, mitochondrial; Short=MRP-S18-2; Flags: Precursor) HSP 1 Score: 113.62 bits (283), Expect = 3.803e-27 Identity = 57/136 (41.91%), Postives = 81/136 (59.56%), Query Frame = 0 Query: 56 SEPDDPRVHKVPL----EVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFV 187 + P+D + +VP+ + KY++S YQ YG +W YRRN G + TRKMC+R ++A NPCPICRD+ L VD+RN+KLL QF+ ++G + + TGVC K+ + A+QKA D G L P V Sbjct: 36 APPEDDSLPQVPISPYKDEPWKYLDSEEYQNRYGSRPVWADYRRNHKGGIPPQRTRKMCIRGNKVAG-NPCPICRDQKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLRYHIPQV 170
BLAST of GM16961 vs. SwissProt
Match: gi|75062118|sp|Q5TM62.1|RT18B_MACMU (RecName: Full=28S ribosomal protein S18b, mitochondrial; Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName: Full=28S ribosomal protein S18-2, mitochondrial; Short=MRP-S18-2; Flags: Precursor) HSP 1 Score: 111.694 bits (278), Expect = 2.096e-26 Identity = 55/115 (47.83%), Postives = 70/115 (60.87%), Query Frame = 0 Query: 73 KYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFV 187 KY+ES YQE YG +W YRRN G + TRK C+R ++A NPCPICRD L VD+RN+KLL QF+ ++G + S TGVC K+ + A+QKA D G L P V Sbjct: 57 KYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRGNKVAG-NPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHSLYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQV 170
BLAST of GM16961 vs. SwissProt
Match: gi|115311862|sp|Q1XHY1.1|RT18B_PANTR (RecName: Full=28S ribosomal protein S18b, mitochondrial; Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName: Full=28S ribosomal protein S18-2, mitochondrial; Short=MRP-S18-2; Flags: Precursor) HSP 1 Score: 110.923 bits (276), Expect = 3.401e-26 Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 0 Query: 73 KYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFV 187 KY+ES YQE YG +W YRRN G + TRK C+R+ ++ NPCPICRD L VD+RN+KLL QF+ ++G + + TGVC K+ + A+QKA D G L P V Sbjct: 57 KYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKVVG-NPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQV 170
BLAST of GM16961 vs. SwissProt
Match: gi|24212203|sp|Q9Y676.1|RT18B_HUMAN (RecName: Full=28S ribosomal protein S18b, mitochondrial; Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName: Full=28S ribosomal protein S18-2, mitochondrial; Short=MRP-S18-2; AltName: Full=Mitochondrial small ribosomal subunit protein bS18b; AltName: Full=Mitochondrial small ribosomal subunit protein mS40; Flags: Precursor) HSP 1 Score: 110.923 bits (276), Expect = 4.291e-26 Identity = 53/115 (46.09%), Postives = 70/115 (60.87%), Query Frame = 0 Query: 73 KYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFV 187 KY+ES YQE YG +W YRRN G + TRK C+R+ ++ NPCPICRD L VD+RN+KLL QF+ ++G + + TGVC K+ + A+QKA D G L P V Sbjct: 57 KYLESEEYQERYGSRPVWADYRRNHKGGVPPQRTRKTCIRRNKVVG-NPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFYAPYTGVCVKQHKRLTQAIQKARDHGLLIYHIPQV 170
BLAST of GM16961 vs. SwissProt
Match: gi|108935897|sp|P82918.2|RT18B_BOVIN (RecName: Full=28S ribosomal protein S18b, mitochondrial; Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName: Full=28S ribosomal protein S18-2, mitochondrial; Short=MRP-S18-2; Flags: Precursor) HSP 1 Score: 107.842 bits (268), Expect = 4.113e-25 Identity = 54/136 (39.71%), Postives = 79/136 (58.09%), Query Frame = 0 Query: 56 SEPDDPRVHKVPL----EVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFV 187 + P+D + +P+ + KY++S Y G +W YRRN G + TRKMC+R ++A NPCPICRD+ L VD+RN+KLL QF+ ++G + + TGVC K+ + A+QKA D G L+ P V Sbjct: 36 APPEDDSLPPIPVSPYEDEPWKYLDSEEYHNRNGSRPVWADYRRNHKGGIPPQRTRKMCIRGNKVAG-NPCPICRDQKLHVDFRNVKLLKQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARDHGLLSYHIPQV 170
BLAST of GM16961 vs. SwissProt
Match: gi|24212195|sp|Q99N84.1|RT18B_MOUSE (RecName: Full=28S ribosomal protein S18b, mitochondrial; Short=MRP-S18-b; Short=Mrps18-b; Short=S18mt-b; AltName: Full=28S ribosomal protein S18-2, mitochondrial; Short=MRP-S18-2; Flags: Precursor) HSP 1 Score: 104.375 bits (259), Expect = 7.178e-24 Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 0 Query: 73 KYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFV 187 KY++S Y YG +W YRRN G + TRK C+R ++A NPCPICRD L VD+RN+KLL QF+ ++G + + TGVC K+ + A+QKA + G L+ P V Sbjct: 55 KYLDSEEYHNRYGSRPVWADYRRNHKGGVPPQRTRKTCIRNNKVAG-NPCPICRDHKLHVDFRNVKLLEQFVCAHTGIIFHAPYTGVCMKQHKKLTQAIQKARECGLLSYYVPQV 168
BLAST of GM16961 vs. nr
Match: gi|1037056500|ref|XP_017081374.1| (PREDICTED: 28S ribosomal protein S18b, mitochondrial [Drosophila eugracilis]) HSP 1 Score: 172.94 bits (437), Expect = 9.191e-47 Identity = 89/186 (47.85%), Postives = 117/186 (62.90%), Query Frame = 0 Query: 13 RAILTSASALARGGARSSSAWLWTTARLGQESSEDPEDGEA-----QYSEPDDP--RVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDY 191 R I + L R G S + R E+S D +DGEA S DP R +P+E S++YM+S+AY++TYG +W YRRN + TRKMC+RQ RI++ NPCPICRDEYLV+DYRN +LL QFI+ +SGE+L+ KTG+C+K L +RVA+Q+A D GYL D PF YDY Sbjct: 6 RGIYCGLANLTRSG--RVSIHTASIFRCKAEASADEKDGEATEGDSSTSSGPDPKDRTTVIPVETSMRYMKSSAYKQTYGKDPVWTQYRRNHKGMYAPRKTRKMCIRQNRISTGNPCPICRDEYLVLDYRNTELLEQFISPHSGEVLSYSKTGLCQKSHLQLRVAVQQARDSGYLTYDVPFREYDY 189
BLAST of GM16961 vs. nr
Match: gi|1189084591|ref|XP_020810601.1| (28S ribosomal protein S18b, mitochondrial [Drosophila serrata]) HSP 1 Score: 169.474 bits (428), Expect = 2.150e-45 Identity = 86/189 (45.50%), Postives = 121/189 (64.02%), Query Frame = 0 Query: 6 GLASL--GPRAILTSASALARGGARSSSAWLWTTARLGQESSEDPEDGEAQYSEPD-DPRVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDY 191 GLA++ R L +AS L + A TT E++E DG+ S PD R +P+E S++Y++SAAY++TYG+ +W YRRN + TRK C+RQGRIA+ NPCPICRDEYLV+DYRN +LL QFI+ +SG++L+ +TG+C+K +RVA+Q+A D G++ D PF YDY Sbjct: 11 GLATITRSSRGALHTASVLRC----KAEAEAETTDEKSSEATEGEGDGDQVSSGPDPKDRTKNIPVETSMRYLKSAAYKQTYGEDFVWTQYRRNHKGMFAPRKTRKTCIRQGRIATGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSQTGLCQKTHFRLRVAVQQARDSGFITYDVPFREYDY 195
BLAST of GM16961 vs. nr
Match: gi|1036035055|ref|XP_016926119.1| (PREDICTED: 28S ribosomal protein S18b, mitochondrial [Drosophila suzukii]) HSP 1 Score: 168.703 bits (426), Expect = 3.028e-45 Identity = 90/190 (47.37%), Postives = 123/190 (64.74%), Query Frame = 0 Query: 6 GLASL--GPRAILTSASALARGGARSSSAWLWTTARLGQESSEDPEDGEAQYSEPDDPRVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDYDK 193 GLA++ RA L +ASAL S T + G+ ED G A S+P D R +P+E S++Y++SAAY++TYG+ +W YRRN + TRK C+RQ RI + NPCPICRDEYLV+DYRN +LL QFI+ YSG++L+ KTG+C+K L ++VA+Q+A D GYL D PF YDY++ Sbjct: 11 GLANITRNSRAALHTASALRCKAEASGEEKDATESTEGE--GEDNSSGSA--SDPKD-RSKLIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKQCIRQNRITTGNPCPICRDEYLVLDYRNTELLEQFISPYSGDVLSYSKTGLCQKSHLRLQVAVQQARDSGYLTYDVPFREYDYNE 195
BLAST of GM16961 vs. nr
Match: gi|1036776467|ref|XP_017019170.1| (PREDICTED: 28S ribosomal protein S18b, mitochondrial [Drosophila kikkawai]) HSP 1 Score: 168.318 bits (425), Expect = 5.235e-45 Identity = 83/184 (45.11%), Postives = 119/184 (64.67%), Query Frame = 0 Query: 16 LTSASALARGGARSSS-----AWLWTTARLGQESSEDPEDGEAQYSEPD-DPRVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDYDK 193 L SA+ +RG ++S A T E++E DG+ S PD R +P+E S++Y++SAAY++TYG+ +W YRRN + TRK C+RQGRIA+ NPCPICRDEYLV+DYRN +LL QFI+ +SG++L+ +TG+C+K + VA+Q+A D G+L D PF YDY++ Sbjct: 12 LASATRSSRGALHTASVVRCKAEAEATDEKSSEATEGEGDGDQVSSGPDPKDRTKNIPVETSMRYLKSAAYKQTYGEDFVWTQYRRNHKGMFAPRKTRKTCIRQGRIATGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSQTGLCQKTHFRLMVAVQQARDSGFLTYDVPFREYDYNE 195
BLAST of GM16961 vs. nr
Match: gi|195345280|ref|XP_002039198.1| (GM16961 [Drosophila sechellia] >gi|194134328|gb|EDW55844.1| GM16961 [Drosophila sechellia]) HSP 1 Score: 168.318 bits (425), Expect = 5.292e-45 Identity = 91/190 (47.89%), Postives = 124/190 (65.26%), Query Frame = 0 Query: 6 GLASL--GPRAILTSASALARGGARSSSAWLWTTARLGQESSEDPEDGEAQYSEPDDPRVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDYDK 193 GLA++ R L +ASAL R A SS+ A G+ ED G A +P D R +P+E S++Y++SAAY++TYG+ +W YRRN + TRK C+RQ RI++ NPCPICRDEYLV+DYRN +LL QFI+ +SG++L+ KTG+C+K L + VA+Q+A D GYL D PF YDYD+ Sbjct: 11 GLANITRNSRGALHTASAL-RCKAESSTEENDAAANEGE--GEDNASGTA--PDPKD-RSKAIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRISTGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYLTYDVPFREYDYDE 194
BLAST of GM16961 vs. nr
Match: gi|195161757|ref|XP_002021728.1| (GL26668 [Drosophila persimilis] >gi|194103528|gb|EDW25571.1| GL26668 [Drosophila persimilis]) HSP 1 Score: 167.162 bits (422), Expect = 1.029e-44 Identity = 81/179 (45.25%), Postives = 119/179 (66.48%), Query Frame = 0 Query: 16 LTSASALARGGARSSSAWLWTTARLGQESSEDPEDGEAQYSEPD-DPRVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDYDK 193 L S + +RG ++SA+ A + + D E+ E + S PD R +P+E S++Y++S AY+ETYGD +W YRRN + TRK C+RQG+I++ NPCPICRDEYLV+DYRN +LL QFI+ ++GE+L+ KTG+C+K L +RVA+++A D G + D PF YDY++ Sbjct: 12 LASITRNSRGALHTASAFRCKAATENEAEAVDGEE-EPKSSGPDPKDRTQVIPVETSIRYLKSVAYKETYGDDFVWSQYRRNHKGMYAPRKTRKTCIRQGKISTGNPCPICRDEYLVLDYRNTELLEQFISPHNGEVLSYSKTGLCQKSHLRLRVAVEQARDSGLITYDVPFREYDYNE 189
BLAST of GM16961 vs. nr
Match: gi|1036923625|ref|XP_017095699.1| (PREDICTED: 28S ribosomal protein S18b, mitochondrial [Drosophila bipectinata]) HSP 1 Score: 167.548 bits (423), Expect = 1.217e-44 Identity = 82/191 (42.93%), Postives = 120/191 (62.83%), Query Frame = 0 Query: 23 ARGGARSSSAWLWTTARLGQESSEDPEDGEAQYSEPD------DP--RVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDYDKPTDFKDQRCDTN 205 +RG ++SA + A +E + +GE E DP R +P+E S++Y++SAAY++TYGD +W YRRN + TRK C+RQGRI++ NPCPICRDEYLV+DYRN +LL QFI+ ++G++L+ KTG+C+K L + VA+Q+A D G+L D PF YDY + + + +TN Sbjct: 19 SRGALHTASALRYKAAETAEEKDAENAEGEGGAEESQSSSSGPDPKDRSKVIPVETSMRYLKSAAYKQTYGDDFVWTQYRRNHKGMYAPRKTRKTCIRQGRISTGNPCPICRDEYLVLDYRNTELLEQFISPHNGDVLSYSKTGLCQKSHLRLMVAVQQARDSGFLTYDVPFREYDYSEYYGQEQKEKNTN 209
BLAST of GM16961 vs. nr
Match: gi|1199388662|ref|XP_021189188.1| (28S ribosomal protein S18b, mitochondrial [Helicoverpa armigera]) HSP 1 Score: 165.622 bits (418), Expect = 2.588e-44 Identity = 74/156 (47.44%), Postives = 107/156 (68.59%), Query Frame = 0 Query: 36 TTARLGQESSEDPEDGEAQYSEPDDPRVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDY 191 T R + E+ + + + +P R +P+E S+KYM+S AYQ+TYGD +W LYRRN G + TRK CVR G I++ NPCPICRDEYLV+D+RN +LL QF+++Y+G++L + KTG+C+K+ + VA+++A D+GYL D PF YDY Sbjct: 21 TGVRFYADQQEESNENQKE-VDPTKDRTKIIPVETSIKYMQSKAYQQTYGDNAVWVLYRRNHKGGVAPRKTRKSCVRNGVISTGNPCPICRDEYLVLDHRNTQLLEQFVSEYTGQILDAYKTGLCQKKHKELLVAIERAWDQGYLTYDVPFREYDY 175
BLAST of GM16961 vs. nr
Match: gi|157704353|gb|ABV68865.1| (RPS18 [Trichoplusia ni]) HSP 1 Score: 164.466 bits (415), Expect = 8.476e-44 Identity = 78/151 (51.66%), Postives = 105/151 (69.54%), Query Frame = 0 Query: 44 SSEDPEDGEAQYSEPDDP---RVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDY 191 S + E GE Q +P DP R +P+E S++YM+S AYQ+TYG+ IW LYRRN G + TRK CVR G I++ NPCPICRDEY V+D+RN KLL QFI++Y+G++L + KTG+C+K+ + VA+++A D GYL D PF YDY Sbjct: 27 SDQTEETGEEQ--KPIDPSKDRTKIIPVETSIRYMQSKAYQQTYGENTIWALYRRNHKGGFAPRKTRKSCVRNGIISTGNPCPICRDEYSVLDHRNTKLLEQFISEYTGQVLDAFKTGLCQKQHKQLLVAIERAWDHGYLTYDVPFREYDY 175
BLAST of GM16961 vs. nr
Match: gi|195580336|ref|XP_002080006.1| (uncharacterized protein Dsimw501_GD21714 [Drosophila simulans] >gi|194192015|gb|EDX05591.1| GD21714 [Drosophila simulans] >gi|900888440|gb|KMY91133.1| uncharacterized protein Dsimw501_GD21714 [Drosophila simulans]) HSP 1 Score: 164.466 bits (415), Expect = 1.098e-43 Identity = 88/190 (46.32%), Postives = 124/190 (65.26%), Query Frame = 0 Query: 6 GLASL--GPRAILTSASALARGGARSSSAWLWTTARLGQESSEDPEDGEAQYSEPDDPRVHKVPLEVSLKYMESAAYQETYGDAKIWELYRRNFSKGRTYKPTRKMCVRQGRIASSNPCPICRDEYLVVDYRNIKLLNQFITDYSGELLTSEKTGVCRKEWLNIRVALQKALDRGYLNIDFPFVAYDYDK 193 GLA++ R L +ASAL R A +S+ A G+ ED G A +P D R +P+E S++Y++SAAY++TYG+ +W YRRN + TRK C+RQ RI++ NPCPICRDEYLV+DYRN +LL QFI+ +SG++L+ KTG+C+K L + VA+Q+A D GY+ D PF YDY++ Sbjct: 11 GLANITRNSRGALHTASAL-RCKAETSTEENDAAANEGE--GEDNAGGSA--PDPKD-RSKAIPVETSIRYLKSAAYKQTYGEDFVWTQYRRNHKGMYAPRKTRKTCIRQNRISTGNPCPICRDEYLVLDYRNTELLEQFISPHSGDVLSYSKTGLCQKSHLRLMVAVQQARDSGYITYDVPFREYDYNE 194 The following BLAST results are available for this feature:
BLAST of GM16961 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 4
BLAST of GM16961 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 6
BLAST of GM16961 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1978_size23474:1928..9663- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1978_size23474-processed-gene-0.2 ID=snap_masked-scaffold1978_size23474-processed-gene-0.2|Name=GM16961|organism=Tigriopus kingsejongensis|type=gene|length=7736bp|location=Sequence derived from alignment at scaffold1978_size23474:1928..9663- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'GM16961' has the following synonyms
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